Conservation and Function of a Potential Substrate-Binding Domain in the Yeast Clb5 B-Type Cyclin

REFERENCES

• Adams, P. D., Sellers, W. R., Sharma, S. K., Wu, A. D., Nalin, C. M., Kaelin, W. G.Jr.. 1996. Identification of a cyclin-cdk2 recognition motif present in substrates and p21-like cyclin-dependent kinase inhibitors. Mol. Cell. Biol. 16:6623–6633
   PubMed Web of Science ®Google Scholar
• Amon, A., Irniger, S., and Nasmyth, K.. 1994. Closing the cell cycle circle in yeast: G2 cyclin proteolysis initiated at mitosis persists until the activation of G1 cyclins in the next cycle. Cell 77:1037–1050
   PubMedGoogle Scholar
• Bazan, J.. 1996. Helical fold prediction for the cyclin box. Proteins 24:1–17
   PubMedGoogle Scholar
• Brown, N. R., Noble, M. E. M., Endicott, J. A., Garman, E. F., Wakatsuki, S., Mitchell, E., Rasmussen, B., Hunt, T., and Johnson, L. N.. 1995. The crystal structure of cyclin A. Structure 3:1235–1247
   PubMed Web of Science ®Google Scholar
• Brown, N. R., Noble, M. E. M., Endicott, J. A., and Johnson, L. N.. 1999. The structural basis for specificity of substrate and recruitment peptides for cyclin-dependent kinases. Nat. Cell Biol. 1:438–443
   PubMed Web of Science ®Google Scholar
• Castaño, E., Kleyner, Y., and Dynlacht, B. D.. 1998. Dual cyclin-binding domains are required for p107 to function as a kinase inhibitor. Mol. Cell. Biol. 18:5380–5391
   PubMedGoogle Scholar
• Cross, F. R.. 1995. Starting the cell cycle: what's the point? Curr. Opin. Cell Biol. 7:790–797
   PubMed Web of Science ®Google Scholar
• Cross, F. R., Yuste-Rojas, M., Gray, S., and Jacobson, M.. 1999. Specialization and targeting of B-type cyclins. Mol. Cell 4:11–19
   PubMed Web of Science ®Google Scholar
• Donaldson, A. D., Raghuraman, M. K., Friedman, K. L., Cross, F. R., Brewer, B. J., and Fangman, W. L.. 1998. CLB5-dependent activation of late replication origins in S. cerevisiae. Mol. Cell 2:173–182
   PubMed Web of Science ®Google Scholar
• Epstein, C. B., and Cross, F. R.. 1992. CLB5: a novel B cyclin from budding yeast with a role in S phase. Genes Dev. 6:1695–1706
   PubMed Web of Science ®Google Scholar
• Haase, S., and Reed, S.. 1999. Evidence that a free-running oscillator drives G1 events in the budding yeast cell cycle. Nature 401:394–397
   PubMed Web of Science ®Google Scholar
• Hannon, G. J., Demetrick, D., and Beach, D.. 1993. Isolation of the Rb-related p130 through its interaction with CDK2 and cyclins. Genes Dev. 7:2378–2391
   PubMed Web of Science ®Google Scholar
• Harbour, J., Luo, R., Dei Santi, A., Postigo, A., and Dean, D.. 1999. Cdk phosphorylation triggers sequential intramolecular interactions that progressively block Rb functions as cells move through G1. Cell 98:859–869
   PubMed Web of Science ®Google Scholar
• Henikoff, S., and Henikoff, J. G.. 1991. Amino acid substitution matrices from protein blocks. Proc. Natl. Acad. Sci. USA 89:10915–10919
   Google Scholar
• Hodge, A., and Mendenhall, M.. 1999. The cyclin-dependent kinase inhibitory domain of the yeast Sic1 protein is contained within the C-terminal 70 amino acids. Mol. Gen. Genet. 262:55–64
   PubMedGoogle Scholar
• Jacobson, M. D., Gray, S., Yuste-Rojas, M., and Cross, F. R.. 2000. Testing cyclin specificity in the exit from mitosis. Mol. Cell. Biol. 20:4483–4493
   PubMedGoogle Scholar
• James, P., Halladay, J., and Craig, E.. 1996. Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast. Genetics 144:1425–1436
   PubMed Web of Science ®Google Scholar
• Jeffrey, P. D., Russo, A. A., Polyak, K., Gibbs, E., Hurwitz, J., Massague, J., and Pavletich, N.. 1995. Mechanism of CDK activation revealed by the structure of a cyclinA-CDK2 complex. Nature 376:313–320
   PubMed Web of Science ®Google Scholar
• Levine, K., Huang, K., and Cross, F. R.. 1996. Saccharomyces cerevisiae G1 cyclins differ in their intrinsic functional specificities. Mol. Cell. Biol. 16:6794–6803
   PubMedGoogle Scholar
• Lim, H. H., Goh, P. Y., and Surana, U.. 1998. Cdc20 is essential for the cyclosome-mediated proteolysis of both Pds1 and Clb2 during M phase in budding yeast. Curr. Biol. 8:231–234
   PubMed Web of Science ®Google Scholar
• Mayer, B. J., and Gupta, R.. 1998. Functions of SH2 and SH3 domains. Curr. Top. Microbiol. Immunol. 228:1–22
   PubMedGoogle Scholar
• Mendenhall, M. D., and Hodge, A. E.. 1998. Regulation of Cdc28 cyclin-dependent protein kinase activity during the cell cycle of the yeast Saccharomyces cerevisiae. Microbiol. Mol. Biol. Rev. 62:1191–1243
   PubMed Web of Science ®Google Scholar
• Merritt, E. A., and Bacon, D. J.. 1997. Raster3D: photorealistic molecular graphics. Methods Enzymol. 277:505–524
   PubMed Web of Science ®Google Scholar
• Nasmyth, K.. 1996. At the heart of the budding yeast cell cycle. Trends Genet. 12: 405
   PubMedGoogle Scholar
• Nicholls, A., Sharp, K. A., and Honig, B.. 1991. Protein folding and association insights from the interfacial and thermodynamic properties of hydrocarbons. Proteins 11:281–296
   PubMed Web of Science ®Google Scholar
• Roberts, J.. 1999. Evolving ideas about cyclins. Cell 98:129–132
   PubMed Web of Science ®Google Scholar
• Russo, A. A., Jeffrey, P. D., Patten, A. K., Massagué, J., and Pavletich, N. P.. 1996. Crystal structure of the p27Kip1 cyclin-dependent-kinase inhibitor bound to the cyclin A-Cdk2 complex. Nature 382:325–331
   PubMed Web of Science ®Google Scholar
• Russo, A. A., Jeffrey, P. D., and Pavletich, N. P.. 1996. Structural basis of cyclin-dependent kinase activation by phosphorylation. Nat. Struct. Biol. 3:696–700
   PubMedGoogle Scholar
• Saha, P., Eichbaum, Q., Silberman, E. D., Mayer, B. J., and Dutta, A.. 1997. p21CIP1 and Cdc25A: competition between an inhibitor and an activator of cyclin-dependent kinases. Mol. Cell. Biol. 17:4338–4345
   PubMedGoogle Scholar
• Schulman, B. A., Lindstrom, D. L., and Harlow, E.. 1998. Substrate recruitment to cyclin-dependent kinase 2 by a multipurpose docking site on cyclin A. Proc. Natl. Acad. Sci. USA 95:10453–10458
   PubMed Web of Science ®Google Scholar
• Schwob, E., Böhm, T., Mendenhall, M. D., and Nasmyth, K.. 1994. The B-type cyclin kinase inhibitor p40SIC1 controls the G1 to S transition in S. cerevisiae. Cell 79:233–244
   PubMed Web of Science ®Google Scholar
• Schwob, E., and Nasmyth, K.. 1993. CLB5 and CLB6, a new pair of B cyclins involved in DNA replication in Saccharomyces cerevisiae. Genes Dev. 7:1160–1175
   PubMed Web of Science ®Google Scholar
• Segal, M., and Reed, S.. 1998. Clb5-associated kinase activity is required early in the spindle pathway for correct preanaphase nuclear positioning in Saccharomyces cerevisiae. J. Cell Biol. 143:135–145
   PubMed Web of Science ®Google Scholar
• Sherr, C., and Roberts, J.. 1999. CDK inhibitors: positive and negative regulators of G1-phase progression. Genes Dev. 13:1501–1512
   PubMed Web of Science ®Google Scholar
• Shirayama, M., Toth, A., Galova, M., and Nasmyth, K.. 1999. APCCDC20 promotes exit from mitosis by destroying the anaphase inhibitor Pds1 and cyclin Clb5. Nature 402:203–207
   PubMedGoogle Scholar
• Stern, B., and Nurse, P.. 1996. A quantitative model for the cdc2 control of S phase and mitosis in fission yeast. Trends Genet. 12:345–350
   PubMed Web of Science ®Google Scholar
• Surana, U., Amon, A., Dowzer, C., McGrew, J., Byers, B., and Nasmyth, K.. 1993. Destruction of the CDC28/CLB mitotic kinase is not required for the metaphase to anaphase transition in budding yeast. EMBO J. 12:1969–1978
   PubMed Web of Science ®Google Scholar
• Thompson, J. D., Higgins, D. G., and Gibson, T. J.. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673–4680
   PubMed Web of Science ®Google Scholar
• Toyoshima, H., and Hunter, T.. 1994. p27, a novel inhibitor of G1 cyclin-Cdk protein kinase activity, is related to p21. Cell 78:67–74
   PubMed Web of Science ®Google Scholar
• Verma, R., Feldman, R. M. R., and Deshaies, R. J.. 1997. SIC1 is ubiquitinated in vitro by a pathway that requires CDC4, CDC34, and cyclin/CDK activities. Mol. Biol. Cell 8:1427–1437
   PubMedGoogle Scholar
• Zhu, L., Harlow, E., and Dynlacht, B.. 1995. p107 uses a p21CIP1-related domain to bind cyclin/cdk2 and regulate interactions with E2F. Genes Dev. 15:1740–1752
   Google Scholar