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Gene Expression

Purification and Characterization of a Novel Factor Which Stimulates Rat Ribosomal Gene Transcription In Vitro by Interacting with Enhancer and Core Promoter Elements

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Pages 5177-5186 | Received 17 Apr 1990, Accepted 11 Jul 1990, Published online: 31 Mar 2023

Literature Cited

  • Bell, S. P., R. M. Learned, H. M. Jantzen, and R. Tjian. 1988. Functional cooperativity between transcription factor UBF1 and SL1 mediates human ribosomal RNA synthesis. Science 241:1192-1197.
  • Bell, S. P., C. S. Pikaard, R. H. Reeder, and R. Tjian. 1989. Molecular mechanisms governing species-specific transcription of ribosomal RNA. Cell 59:489-497.
  • Cassidy, B. G., H. F. Yang-Yen, and L. I. Rothblum. 1986. Transcriptional role for the nontranscribed spacer of rat ribosomal DNA. Mol. Cell. Biol. 6:2766-2773.
  • Davidson, I., J. H. Xiao, R. Rosales, A. Staub, and P. Chambon. 1988. The HeLa cell protein TEF-1 binds specifically and cooperatively to two SV40 enhancer motifs of unrelated sequence. Cell 54:931-942.
  • De Winter, R. F. J., and T. Moss. 1986. Spacer promoters are essential for efficient enhancement of X. laevis ribosomal transcription. Cell 44:313-318.
  • DeWinter, R. F. J., and T. Moss. 1987. A complex array of sequences enhances ribosomal transcription in Xenopus laevis. J. Mol. Biol. 196:813-827.
  • Dixit, A., L. C. Garg, W. Chao, and S. T. Jacob. 1987. An enhancer element in the far upstream spacer region of rat ribosomal RNA gene. J. Biol. Chem. 262:11616-11622.
  • Dixit, A., L. C. Garg, and S. T. Jacob. 1989. A cis-acting sequence within the rat ribosomal DNA enhancer region can modulate RNA polymerase II-directed transcription of the metallothionein I gene in vitro. DNA 8:311-320.
  • Elion, E. A., and J. R. Warner. 1986. An RNA polymerase I enhancer in Saccharomyces cerevisiae. Mol. Cell. Biol. 6:2089-2097.
  • Financsek, I., K. Mizumoto, Y. Mishima, and M. Muramatsu. 1982. Human ribosomal RNA gene: nucleotide sequence of the transcription initiation region and comparison of three mammalian genes. Proc. Natl. Acad. Sci. USA 79:3092-3096.
  • Fisher, P. P., and D. A. Clayton. 1988. Purification and characterization of human mitochondrial transcription factor 1. Mol. Cell. Biol. 8:3496-3509.
  • Garg, L. C., A. Dixit, and S. T. Jacob. 1989. A 37-base pair element in the far upstream spacer region can enhance transcription of rat rDNA in vitro and can bind to the core promoter-binding factors). J. Biol. Chem. 264:220-224.
  • Garg, L. C., A. Dixit, M. L. Webb, and S. T. Jacob. 1989. Interaction of a positive regulatory factors) with a 106-base pair upstream region controls transcription of metallothionein-1 gene in the liver. J. Biol. Chem. 264:2134-2138.
  • Hager, D. A., and R. R. Burgess. 1980. Elution of proteins from sodium dodecyl sulfate-polyacrylamide gels, removal of sodium dodecyl sulfate, and renaturation of enzymatic activity: results with sigma subunits of Escherichia coli RNA polymerase, wheat germ DNA topoisomerase, and other enzymes. Anal. Biochem. 109:76-82.
  • Jacob, S. T. 1986. Transcription of eukaryotic ribosomal RNA gene. Mol. Cell. Biochem. 70:11-20.
  • Jacob, S. T., W. J. Steele, and H. Busch. 1967. Turnover of 45S RNA of the regenerating liver and walker tumor. Cancer Res. 27:52-60.
  • Kadonaga, J. T., and R. Tjian. 1986. Affinity purification of sequence-specific DNA binding proteins. Proc. Natl. Acad. Sci. USA 85:669-673.
  • Kurl, R., and S. T. Jacob. 1985. Accurate initiation of rat ribosomal RNA gene transcription using a fractionated nuclear extract from normal liver and hepatoma. Proc. Natl. Acad. Sci. USA 82:1059-1063.
  • Kurl, R. N., L. I. Rothblum, and S. T. Jacob. 1984. A purified fraction containing RNA polymerase I that can accurately transcribe rat ribosomal RNA gene. Proc. Natl. Acad. Sci. USA 81:6672-6675.
  • Labhart, P., and R. H. Reeder. 1984. Enhancer-like properties of the 60/81 bp elements in the ribosomal gene spacers of Xenopus laevis. Cell 37:285-289.
  • Labhart, P., and R. H. Reeder. 1985. Xenopus ribosomal gene enhancers function when inserted inside the gene they enhance. Nucleic Acids Res. 13:8999-9009.
  • Laemmli, U. K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature (London) 227:680-685.
  • Landolfi, N. F., J. D. Capra, and P. W. Tucker. 1987. Protein- nucleotide contacts in the immunoglobulin heavy-chain promoter region. Proc. Natl. Acad. Sci. USA 84:3851-3855.
  • Learned, R. M., S. Cordes, and R. Tjian. 1985. Purification and characterization of a transcription factor that confers promoter specificity to human RNA polymerase I. Mol. Cell. Biol. 5:1358-1369.
  • Learned, R. M., T. K. Learned, M. M. Haltiner, and R. Tjian. 1986. Human rRNA transcription is modulated by the coordinate binding of two factors to an upstream control element. Cell 45:847-857.
  • Maniatis, T., E. F. Fritsch, and J. Sambrook. 1982. Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
  • Manley, J., A. Fire, A. Cano, P. A. Sharp, and M. Gefter. 1980. DNA-dependent transcription of adenovirus genes in a soluble whole cell extract. Proc. Natl. Acad. Sci. USA 77:3855-3859.
  • Maxam, A. M., and W. Gilbert. 1980. Sequencing end-labeled DNA with base-specific chemical cleavages. Methods Enzymol. 65:499-560.
  • Miller, O. L., and B. R. Beatty. 1969. Visualization of nucleolar genes. Science 164:955-957.
  • Mitchelson, K., and T. Moss. 1987. The enhancement of ribosomal transcription by the recycling of RNA polymerase I. Nucleic Acids Res. 15:9577-9596.
  • Pfeifer, K., T. Prezant, and L. Guarente. 1987. Yeast HAP1 activator binds to two upstream activation sites of different sequences. Cell 49:19-27.
  • Rothblum, L. I., R. Reddy, and B. Cassidy. 1982. Transcription initiation site of rat ribosomal DNA. Nucleic Acids Res. 10:7345-7362.
  • Sentenac, A. 1985. Eukaryotic RNA polymerases. Crit. Rev. Biochem. 18:31-90.
  • Smith, S. D., E. Oriahi, D. Lowe, H.-F. Yang-Yen, D. O’Mahony, K. Rose, K. Chen, and L. I. Rothblum. 1990. Characterization of factors that direct transcription of rat ribosomal DNA. Mol. Cell. Biol. 10:3105-3116.
  • Shore, D., and K. Nasmyth. 1987. Purification and cloning of a DNA binding protein from yeast that binds to both silencer and activator elements. Cell 51:721-732.
  • Sollner-Webb, B., and J. Tower. 1986. Transcription of cloned eukaryotic ribosomal RNA gene. Annu. Rev. Biochem. 55:801-830.
  • Tsai, S. Y., M. J. Tsai, and B. W. O’Malley. 1989. Cooperative binding of steroid hormone receptors contributes to transcriptional synergism at target enhancer elements. Cell 57:443-448.
  • Webb, M. L., J. F. Mealey-Cavender, and S. T. Jacob. 1989. Glucocorticoid-induced stimulation of ribosomal gene transcription in rat hepatoma cells is mediated by modification of RNA polymerase I or an associated factor. Mol. Endocrinol. 3:1861-1868.
  • Yamamoto, O., N. Takakusa, Y. Mishima, R. Kominami, and M. Muramatsu. 1984. Determination of the promoter region of mouse ribosomal RNA gene by an in vitro transcription system. Proc. Natl. Acad. Sci. USA 81:299-303.
  • Yang-Yen, H. F., and L. Rothblum. 1988. Purification and characterization of a high-mobility-group-like DNA-binding protein that stimulates rRNA synthesis in vitro. Mol. Cell. Biol. 8:3406-3414.

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