Multiple Factors Bind the Upstream Activation Sites of the Yeast Enolase Genes ENO1 and EN02: ABFI Protein, like Repressor Activator Protein RAP1, Binds cis-Acting Sequences Which Modulate Repression or Activation of Transcription

Literature Cited

• Baker, H. V. 1986. Glycolytic gene expression in Saccharomyces cerevisiae: nucleotide sequence of GCR1, null mutants, and evidence for expression. Mol. Cell. Biol. 6:3774-3784.
   PubMedGoogle Scholar
• Boucherie, H. 1985. Protein synthesis during transition and stationary phase under glucose limitation in Saccharomyces cerevisiae. J. Bacteriol. 161:385-392.
   PubMed Web of Science ®Google Scholar
• Bram, R. J., and R. D. Romberg. 1987. Isolation of a Saccharomyces cerevisiae centromere DNA-binding protein, its human homolog, and its possible role as a transcription factor. Mol. Cell. Biol. 7:403-409.
   PubMedGoogle Scholar
• Brand, A. H., G. Micklem, and K. Nasmyth. 1987. A yeast silencer contains sequences that can promote autonomous plas-mid replication and transcriptional activation. Cell 51:709-719.
   PubMedGoogle Scholar
• Buchman, A. R., W. J. Kimmerly, J. Rine, and R. D. Kornberg. 1988. Two DNA-binding factors recognize specific sequences at silencers, upstream activating sequences, autonomously replicating sequences, and telomeres in Saccharomyces cerevisiae. Mol. Cell. Biol. 8:210-225.
   PubMed Web of Science ®Google Scholar
• Buchman, A. R., N. F. Lue, and R. D. Kornberg. 1988. Connections between transcriptional activators, silencers, and telomeres as revealed by functional analysis of a yeast DNA-binding protein. Mol Cell. Biol. 8:5086-5099.
   PubMed Web of Science ®Google Scholar
• Clifton, D., and D. G. Fraenkel. 1981. The gcr (glycolysis regulation) mutation of Saccharomyces cerevisiae. J. Biol. Chem. 256:13074-13078.
   PubMed Web of Science ®Google Scholar
• Clifton, D., S. B. Weinstock, and D. G. Fraenkel. 1978. Glycolysis mutants in Saccharomyces cerevisiae. Genetics 88:1-11.
   PubMed Web of Science ®Google Scholar
• Cohen, R., J. P. Holland, T. Yokoi, and M. J. Holland. 1986. Identification of a regulatory region that mediates glucose-dependent induction of the Saccharomyces cerevisiae enolase gene EN02. Mol. Cell. Biol. 6:2287-2297.
   PubMedGoogle Scholar
• Cohen, R., T. Yokoi, J. P. Holland, A. E. Pepper, and M. J. Holland. 1987. Transcription of the constitutively expressed yeast enolase gene ENO1 is mediated by positive and negative cis-acting regulatory sequences. Mol. Cell. Biol. 7:2753-2761.
   PubMedGoogle Scholar
• Diffley, J. F. X., and B. Stillman. 1988. Purification of a yeast protein that binds to origins of DNA replication and a transcriptional silencer. Proc. Natl. Acad. Sci. USA 85:2120-2124.
   PubMed Web of Science ®Google Scholar
• Diffley, J. F. X., and B. Stillman. 1989. Similarity between the transcriptional silencer binding proteins ABFI and RAP1. Science 246:1034-1038.
   PubMedGoogle Scholar
• Dorsman, J. C., W. C. van Heeswijk, and L. A. Grivell. 1988. Identification of two factors which bind to the upstream sequences of a number of nuclear genes coding for mitochondrial proteins and to genetic elements important for cell division in yeast. Nucleic Acids Res. 16:7287-7301.
   PubMedGoogle Scholar
• Eisenberg, S., C. Civalier, and Β. Κ. Tye. 1988. Specific interactions between a Saccharomyces cerevisiae protein and a DNA element associated with certain autonomously replicating sequences. Proc. Natl. Acad. Sci. USA 85:743-746.
   PubMedGoogle Scholar
• Halfter, H., U. Muller, E.-L. Winnacker, and D. Gallwitz. 1989. Isolation and DNΑ-binding characteristics of a protein involved in transcription activation of two divergently transcribed, essential yeast genes. EMBO J. 8:3029-3037.
   PubMedGoogle Scholar
• Hamil, K. G., H. G. Nam, and Η. Μ. Fried. 1988. Constitutive transcription of yeast ribosomal protein gene TCM1 is promoted by uncommon cis- and trans-acting elements. Mol. Cell. Biol. 8:4328-4341.
   PubMedGoogle Scholar
• Herruer, M. H., W. H. Mager, L. P. Woudt, R. Τ. Μ. Nieuwint, G. M. Wassenaar, P. Groeneveld, and R. J. Planta. 1987. Transcriptional control of yeast ribosomal protein synthesis during carbon-source upshift. Nucleic Acids Res. 15:10133-10144.
   PubMedGoogle Scholar
• Hofmann, J. F.-X., T. Laroche, A. H. Brand, and S. M. Gasser. 1989. RAP-1 factor is necessary for DNA loop formation in vitro at the silent mating type locus ΗML. Cell 57:725-737.
   PubMedGoogle Scholar
• Holland, J. P., P. K. Brindle, and M. J. Holland. 1990. Sequences within an upstream activation site in the yeast enolase gene EN02 modulate repression of EN02 expression in strains carrying a null mutation in the positive regulatory gene GCR1. Mol. Cell. Biol. 10:4863-4871.
   PubMedGoogle Scholar
• Holland, M. J., T. Yokoi, J. P. Holland, K. Myambo, and M. A. Innis. 1987. The GCRl gene encodes a positive transcriptional regulator of the enolase and glyceraldehyde-3-phosphate dehydrogenase gene families in Saccharomyces cerevisiae. Mol. Cell. Biol. 7:813-820.
   PubMedGoogle Scholar
• Huet, J., P. Cottrelle, M. Cool, M.-L. Vignais, D. Thiele, C. Marck, J.-M. Buhler, A. Sentenac, and P. Fromageot. 1985. A general upstream binding factor for genes of the yeast translational apparatus. EMBO J. 4:3539-3547.
   PubMedGoogle Scholar
• Huet, J., and A. Sentenac. 1987. TUF, the yeast DNA-binding factor specific for UASrpg upstream activating sequences: identification of the protein and its DNA-binding domain. Proc. Natl. Acad. Sci. USA 84:3648-3652.
   PubMedGoogle Scholar
• Innis, Μ. Α., and D. H. Gelfand. 1989. Optimization of PCR, p. 3-12. In M. Innis, D. Gelfand, J. Sninsky, and T. White (ed.), PCR protocols: a guide to methods and applications. Academic Press, Inc., New York.
   Google Scholar
• Jigami, Y., N. Toshimitsu, H. Fujisawa, H. Uemura, H. Tanaka, and S. Nakasato. 1986. Analysis of expression of yeast enolase 1 gene containing a longer pyrimidine-rich region located between the TATA box and transcription start site. J. Biochem. 99:1111-1125.
   PubMedGoogle Scholar
• Kayne, P. S., U.-J. Kim, M. Han, J. R. Mullen, F. Yoshizaki, and M. Grunstein. 1988. Extremely conserved histone H4 Ν terminus is dispensable for growth but essential for repressing the silent mating loci in yeast. Cell 55:27-39.
   PubMed Web of Science ®Google Scholar
• Layne, E. 1957. Spectrophotometric and turbidimetric methods for measuring proteins. Methods Enzymol. 3:447-454.
   Web of Science ®Google Scholar
• Machida, M., H. Uemura, Y. Jigami, and H. Tanaka. 1988. The protein factor which binds to the upstream activating sequence of Saccharomyces cerevisiae ENΟ1 gene. Nucleic Acids Res. 16:1407-1422.
   PubMedGoogle Scholar
• Maitra, P. K., and Z. Lobo. 1971. A kinetic study of glycolytic enzyme synthesis in yeast. J. Biol. Chem. 246:475-488.
   PubMed Web of Science ®Google Scholar
• Maxam, A. M., and W. Gilbert. 1977. A new method for sequencing DNA. Proc. Natl. Acad. Sci. USA 74:560-564.
   PubMed Web of Science ®Google Scholar
• McAlister, L., and M. J. Holland. 1982. Targeted deletion of a yeast enolase structural gene. J. Biol. Chem. 257:7181-7188.
   PubMed Web of Science ®Google Scholar
• Nishizawa, M., R. Araki, and Y. Teranishi. 1989. Identification of an upstream activating sequence and an upstream repressible sequence of the pyruvate kinase gene of the yeast Saccharomyces cerevisiae. Mol. Cell. Biol. 9:442-451.
   PubMedGoogle Scholar
• Ogden, J. E., C. Stanway, S. Kim, J. Mellor, A. J. Kingsman, and S. M. Kingsman. 1986. Efficient expression of the Saccharomyces cerevisiae PGK gene depends on an upstream activation sequence but does not require TATA sequences. Mol. Cell. Biol. 6:4335-4343.
   PubMedGoogle Scholar
• Pavlovic, B., and W. Horz. 1988. The chromatin structure at the promoter of a glyceraldehyde phosphate dehydrogenase gene from Saccharomyces cerevisiae reflects its functional state. Mol. Cell. Biol. 8:5513-5520.
   PubMedGoogle Scholar
• Piper, P. W., B. Curran, M. W. Davies, K. Hirst, A. Lockheart, J. E. Ogden, C. A. Stanway, A. J. Kingsman, and S. M. Kingsman. 1988. A heat shock element in the phosphoglycerate kinase gene promoter of yeast. Nucleic Acids Res. 16:1333-1348.
   PubMedGoogle Scholar
• Shore, D., and K. Nasmyth. 1987. Purification and cloning of a DNA binding protein from yeast that binds to both silencer and activator elements. Cell 51:721-732.
   PubMed Web of Science ®Google Scholar
• Shore, D., D. J. Stillman, A. H. Brand, and K. A. Nasmyth. 1987. Identification of silencer binding proteins from yeast: possible roles in SIR control and DNA replication. EMBO J. 6:461-467.
   PubMed Web of Science ®Google Scholar
• Stanway, C., J. Mellor, J. E. Ogden, A. J. Kingsman, and S. M. Kingsman. 1987. The UAS of the yeast PGK gene contains functionally distinct domains. Nucleic Acids Res. 15:6855-6873.
   PubMedGoogle Scholar
• Swanson, M. E., and M. J. Holland. 1983. RNA polymerase I-dependent selective transcription of yeast ribosomal DNA. J. Biol. Chem. 258:3242-3250.
   PubMedGoogle Scholar
• Sweder, K. S., P. R. Rhode, and J. L. Campbell. 1988. Purification and characterization of proteins that bind to yeast ARSs. J. Biol. Chem. 263:17270-17277.
   PubMed Web of Science ®Google Scholar
• Uemura, H., Y. Jigami, H. Tanaka, N. Toshimitsu, M. Paterson, and S. Nakasato. 1985. Nucleotide sequence of the 5′ flanking region responsible for the enhancement of the expression of yeast enolase 1 gene. J. Biochem. 98:859-862.
   PubMedGoogle Scholar
• Uemura, H., T. Shiba, M. Machida, I. Matsui, Y. Jigami, and H. Tanaka. 1987. A positive regulatory sequence of the Saccharomyces cerevisiae ENO1 gene. J. Biochem. 102:181-189.
   PubMedGoogle Scholar
• Uemura, H., T. Shiba, M. Paterson, Y. Jigami, and H. Tanaka. 1986. Identification of a sequence containing the positive regulatory region of Saccharomyces cerevisiae gene ENO1. Gene 45:67-75.
   PubMedGoogle Scholar
• Walker, S. S., S. C. Francesconi, Β. Κ. Tye, and S. Eisenberg. 1989. The OBF1 protein and its DNA-binding site are important for the function of an autonomously replicating sequence in Saccharomyces cerevisiae. Mol. Cell. Biol. 9:2914-2921.
   PubMedGoogle Scholar
• Wong, H. C., and S. Chang. 1986. Identification of a positive retroregulator that stabilizes mRNAs in bacteria. Proc. Natl. Acad. Sci. USA 83:3233-3237.
   PubMed Web of Science ®Google Scholar