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DNA Dynamics and Chromosome Structure

Functional Conservation of Multiple Elements in Yeast Chromosomal Replicators

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Pages 7643-7651 | Received 13 May 1994, Accepted 08 Jul 1994, Published online: 30 Mar 2023

References

  • Amati, B., and S. M. Gasser. 1990. Drosophila scaffold attached regions bind nuclear scaffolds and can function as ARS elements in both budding and fission yeasts. Mol. Cell. Biol. 10:5442–5454.
  • Bell, S. P., R. Kobayashi, and B. Stillman. 1993. Yeast origin recognition complex functions in transcription silencing and DNA replication. Science 262:1844–1870.
  • Bell, S. P., and B. Stillman. 1992. ATP-dependent recognition of eukaryotic origins of DNA replication by a multiprotein complex. Nature (London) 357:128–134.
  • Bouton, A. H., and M. M. Smith. 1986. Fine-structure analysis of the DNA sequence requirements for autonomous replication of Saccharomyces cerevisiae plasmids. Mol. Cell. Biol. 6:2354–2363.
  • Brewer, B. J., and W. L. Fangman. 1987. The localization of replication origins on ARS plasmids in S. cerevisiae. Cell 51:463–471.
  • Broach, J., Y. Y. Li, J. Feldman, M. Jayaram, J. Abraham, K. A. Nasmyth, and J. B. Hicks. 1983. Localization and sequence analysis of yeast origins of replication. Cold Spring Harbor Symp. Quant. Biol. 47:1165–1173.
  • Buchman, A. R., W. J. Kimmerly, J. Rine, and R. Kornberg. 1988. Two DNA binding factors recognize specific sequences at silencers, upstream activating sequences, and telomeres in Saccharomyces cerevisiae. Mol. Cell. Biol. 8:210–225.
  • Campbell, J. L., and C. S. Newlon. 1991. Chromosomal DNA replication, p. 41–146. In J. R. Broach, J. R. Pringle, and E. W. Jones (ed.), The molecular and cellular biology of the yeast Saccharomyces: genome dynamics, protein synthesis, and energetics. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
  • Celniker, S. E., K. Sweder, F. Spienc, J. E. Bailey, and J. L. Campbell. 1984. Deletion mutations affecting automonously replicating sequence ARS1 of Saccharomyces cerevisiae. Mol. Cell. Biol. 4:2455–2466.
  • Deshpande, A., and C. Newlon. 1992. The ARS consensus sequence is required for chromosomal origin function in Saccharomyces cerevisiae. Mol. Cell. Biol. 12:4305–4313.
  • Diffley, J. F. X., and J. H. Cocker. 1992. Protein-DNA interactions at a yeast replication origin. Nature (London) 357:169–172.
  • Diffley, J. F. X., and B. Stillman. 1988. Purification of a yeast protein that binds to origins of DNA replication and a transcriptional silencer. Proc. Natl. Acad. Sci. USA 85:2120–2124.
  • Dubey, D. D., L. R. Davis, S. A. Greenfeder, L. Y. Ong, J. Zhu, J. R. Broach, C. S. Newlon, and J. A. Huberman. 1991. Evidence suggesting that the ARS elements associated with silencer of the yeast mating-type locus HML do not function as chromosomal origins of replication. Mol. Cell. Biol. 11:5346–5355.
  • Eisenberg, S., C. Civalier, and B.-K. Tye. 1988. Specific interaction between a Saccharomyces cerevisiae protein and a DNA element associated with certain autonomously replicating sequences. Proc. Natl. Acad. Sci. USA 85:743–746.
  • Estes, Η., B. Robinson, and S. Eisenberg. 1992. At least three distinct proteins are necessary for the reconstitution of a specific multiprotein complex at a eukaryotic chromosomal origin of replication. Proc. Natl. Acad. Sci. USA 89:11156–11160.
  • Foss, M., F. J. McNally, P. Laurenson, and J. Rine. 1993. Origin recognition complex (ORC) in transcriptional silencing and DNA replication in S. cerevisiae. Science 262:1838–1844.
  • Greenfeder, S., and C. Newlon. 1992. A replication map of a 61-kb circular derivative of Saccharomyces cerevisiae chromosome III. Mol. Biol. Cell 12:999–1013.
  • Holmes, S. G., and M. Mitchell. 1989. Interaction of the H4 autonomously replicating sequence core consensus sequence and its 3′-flanking domain. Mol. Cell. Biol. 9:5464–5472.
  • Hsiao, C.-L., and J. Carbon. 1979. High-frequency transformation of yeast by plasmids containing the cloned yeast ARG4 gene. Proc. Natl. Acad. Sci. USA 76:3829–3833.
  • Huang, R., and D. Kowalski. 1993. A DNA unwinding element and an ARS consensus comprise a replication origin with a yeast chromosome. EMBO J. 12:4521–4531.
  • Huberman, J. A., J. Zhu, L. R. Davis, and C. S. Newlon. 1988. Close association of a DNA replication origin and an ARS element on chromosome III of the yeast, Saccharomyces cerevisiae. Nucleic Acids Res. 16:6373–6384.
  • Jacob, F., S. Brenner, and F. Cuzin. 1963. On the regulation of DNA replication in bacteria. Cold Spring Harbor Symp. Quant. Biol. 28:329–348.
  • Kearsey, S. 1984. Structural requirements for the function of a yeast chromosomal replicator. Cell 37:299–307.
  • Kornberg, A., and T. A. Baker. 1991. DNA replication. W. H. Freeman & Co., New York.
  • Kunkel, T. 1985. Rapid and efficient site-specific mutagenesis without phenotypic selection. Proc. Natl. Acad. Sci. USA 82:488–492.
  • Li, J. J., and I. Herskowitz. 1993. Isolation of ORC6, a component of the yeast origin recognition complex, by a one-hybrid system. Science 262:1870–1874.
  • Marahrens, Y., and B. Stillman. 1992. A yeast chromosomal origin of DNA replication defined by multiple functional elements. Science 255:817–823.
  • Marahrens, Y., and B. Stillman. 1994. Replicator dominance in a eukaryotic chromosome. EMBO J. 13:3395–3400.
  • McKnight, S. L., and R. Kingsbury. 1982. Transcriptional control signals of a eukaryotic protein-coding gene. Science 217:316–324.
  • Micklem, G., A. Rowley, J. Harwood, K. Nasmyth, and J. F. X. Diffley. 1993. Yeast origin recognition complex is involved in DNA replication and transcriptional silencing. Nature (London) 366:87–89.
  • Natale, D. A., A. E. Schubert, and D. Kowalski. 1992. DNA helical stability accounts for mutational defects in a yeast replication origin. Proc. Natl. Acad. Sci. USA 89:2654–2658.
  • Natale, D. A., R. M. Umek, and D. Kowalski. 1993. Ease of DNA unwinding is a conserved property of yeast replication origin. Nucleic Acids Res. 21:555–560.
  • Palzkill, T. G., and C. S. Newlon. 1988. A yeast replication origin consists of multiple copies of a small conserved sequence. Cell 53:441–450.
  • Palzkill, T. G., S. G. Oliver, and C. S. Newlon. 1986. DNA sequence analysis of ARS elements from chromosome III of Saccharomyces cerevisiae: identification of a new conserved sequence. Nucleic Acids Res. 14:6247–6264.
  • Rhode, P. R., K. S. Sweder, K. F. Oegema, and J. L. Campbell. 1989. The gene encoding ARS-binding factor 1 is essential for the viability of yeast. Genes Dev. 3:1926–1939.
  • Rivier, D., and J. Rine. 1992. An origin of DNA replication and a transcription silencer require a common element. Science 256:659–663.
  • Rowley, A., S. J. Dowell, and J. F. X. Diffley. 1994. Recent developments in the initiation of chromosomal DNA replication: a complex picture emerges. Biochim. Biophys. Acta 1217:239–256.
  • Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
  • Stillman, B. 1993. Replicator renaissance. Nature (London) 366:506–507.
  • Stillman, B. 1994. Initiation of chromosomal DNA replication in eukaryotes. J. Biol. Chem. 269:7047–7050.
  • Stinchcomb, D. T., K. Struhl, and R. W. Davis. 1979. Isolation and characterization of a yeast chromosomal replicator. Nature (London) 282:39–43.
  • Theis, J. F., and C. S. Newlon. 1994. Domain B of ARS307 contains two functional elements and contributes to chromosomal replication origin function. Mol. Cell. Biol. 14:7652–7659.
  • Umek, R. M., and D. Kowalski. 1988. The ease of DNA unwinding as a determinant of initiation at yeast replication origins. Cell 52:559–567.
  • van Houten, J. V., and C. S. Newlon. 1990. Mutational analysis of the consensus sequence of a replication origin from yeast chromosome III. Mol. Cell. Biol. 10:3917–3925.
  • Walker, S. S., S. C. Francesconi, and S. Eisenberg. 1990. A DNA replication enhancer in Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 87:4665–4669.
  • Walker, S. S., A. K. Malik, and S. Eisenberg. 1991. Analysis of the interactions of functional domains of a nuclear origin of replication from Saccharomyces cerevisiae. Nucleic Acids Res. 19:6255–6262.

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