3
Views
3
CrossRef citations to date
0
Altmetric
Research Article

Bidirectional Transcription from a Solo Long Terminal Repeat of the Retrotransposon TED: Symmetrical RNA Start Sites

, , &
Pages 1599-1607 | Received 15 Nov 1985, Accepted 27 Jan 1986, Published online: 31 Mar 2023

LITERATURE CITED

  • Baltimore, D. 1985. Retroviruses and retrotransposons: the role of reverse transcription in shaping the eukaryotic genome. Cell 40:481–482.
  • Bayev, A. A., N. V. Lyubomirskaya, E. B. Dzhumagaliev, E. V. Ananiev, I. G. Amiantova, and Y. V. Ilyin. 1984. Structural organization of transposable element mdg4 from Drosophila melanogaster and a nucleotide sequence of its long terminal repeats. Nucleic Acids Res. 12:3707–3723.
  • Boeke, J. D., D. J. Garfinkel, C. A. Styles, and G. R. Fink. 1985. Ty elements transpose through an RNA intermediate. Cell 40:491–500.
  • Calos, M. P., and J. H. Miller. 1980. Transposable elements. Cell 20:579–595.
  • Clare, J., and P. Farabaugh. 1985. Nucleotide sequence of a yeast Ty element: evidence for an unusual mechanism of gene expression. Proc. Natl. Acad. Sci. USA 82:2829–2833.
  • Crouse, G. F., E. J. Leys, R. N. McEwan, E. G. Frayne, and R. E. Kellens. 1985. Analysis of the mouse dhfr promoter region: existence of a divergently transcribed gene. Mol. Cell. Biol. 5:1847–1858.
  • Cullen, B. R., P. T. Lomedico, and G. Ju. 1984. Transcriptional interference in avian retroviruses: implications for the promoter insertion model of leukaemogenesis. Nature (London) 307:241–245.
  • Elder, R. T., E. Y. Loh, and R. W. Davis. 1983. RNA from the yeast transposable element Tyl has both ends in the direct repeats, a structure similar to retrovirus RNA. Proc. Natl. Acad. Sci. USA 80:2432–2436.
  • Emori, Y., T. Shiba, S. Kanaya, S. Inouye, S. Yuki, and K. Saigo. 1985. The nucleotide sequences of copia and copia- related RNA in Drosophila virus-like particles. Nature (London) 315:773–776.
  • Faulkner, P. 1981. Baculovirus, p. 3–37. In E. W. Davidson (ed.), Pathogenesis of invertebrate microbial diseases. Allanheld Osmun Publ., Totowa, N.J.
  • Fitzgerald, M., and T. Shenk. 1981. The sequence 5′-AAUAAA- 3′ forms part of the recognition site for polyadenylation of late SV40 mRNAs. Cell 24:251–260.
  • Fraser, M. J., G. E. Smith, and M. D. Summers. 1983. Acquisition of host cell DNA sequences by baculoviruses: relationship between host DNA insertions and FP mutants of Autographa californica and Galleria mellonella nuclear polyhedrosis viruses. J. Virol. 47:287–300.
  • Freund, R., and M. Meselson. 1984. Long terminal repeat nucleotide sequence and specific insertion of the gypsy transposon. Proc. Natl. Acad. Sci. USA 81:4462–4464.
  • Friesen, P. D., and L. K. Miller. 1985. Temporal regulation of baculovirus RNA: overlapping early and late transcripts. J. Virol. 54:392–400.
  • Gidoni, D., J. T. Kadonaga, H. Barrera-Saldana, K. Takahashi, P. Chambon, and R. Tjian. 1985. Bidirectional SV40 transcription mediated by tandem Spl binding interactions. Science 230:511–517.
  • Hink, W. F. 1970. Established insect cell line from the cabbage looper, Trichoplusia ni. Nature (London) 225:466–467.
  • Holmes, D. S., and M. Quigley. 1981. A rapid method for the preparation of bacterial plasmids. Anal. Biochem. 114:193–197.
  • Hruby, D. E., and W. K. Roberts. 1976. Encephalomyocarditis virus RNA: variations in polyadenylic acid content and biological activity. J. Virol. 19:325–330.
  • Ikenaga, H., and K. Saigo. 1982. Insertion of a movable genetic element, 297, into the T-A-T-A box for the H3 histone gene in Drosophila melanogaster. Proc. Natl. Acad. Sci. USA 79:4143–4147.
  • Izant, J. G., and H. Weintraub. 1985. Constitutive and conditional suppression of exogenous and endogenous genes by anti-sense RNA. Science 229:345–352.
  • Johnston, M., and R. W. Davis. 1984. Sequences that regulate the divergent GALI-GALIO promoter in Saccharomyces cerevisiae. Mol. Cell. Biol. 4:1440–1448.
  • Kelly, D. C. 1982. Baculovirus replication. J. Gen. Virol. 63:1–13.
  • Kugimiya, W., H. Ikenaga, and K. Saigo. 1983. Close relationship between the long terminal repeats of avian leukosissarcoma virus and copia-like movable genetic elements of Drosophila. Proc. Natl. Acad. Sci. USA 80:3193–3197.
  • Lee, H. H., and L. K. Miller. 1978. Isolation of genotypic variants of Autographa californica nuclear polyhedrosis virus. J. Virol. 27:754–767.
  • Levis, R., K. O'Hare, and G. M. Rubin. 1984. Effects of transposable element insertions on RNA encoded by the white gene of Drosophila. Cell 38:471–481.
  • Maniatis, T., E. F. Fritsch, and J. Sambrook. 1982. Molecular cloning. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
  • McMaster, G. K., and G. G. Carmichael. 1977. Analysis of single- and double-stranded nucleic acids on polyacrylamide and agarose gels by using glyoxal and acridine orange. Proc. Natl. Acad. Sci. USA 74:4835–4838.
  • Miller, D. W., and L. K. Miller. 1982. A virus mutant with an insertion of a copia-like transposable element. Nature (London) 299:562–564.
  • Mount, S. M., and G. M. Rubin. 1985. Complete nucleotide sequence of the Drosophila transposable element copia: homology between copia and retroviral proteins. Mol Cell Biol. 5:1630–1638.
  • Muesing, M. A., D. H. Smith, C. D. Cabradilla, C. V. Benton, L. A. Lasky, and D. J. Capon. 1985. Nucleic acid structure and expression of the human AIDS/lymphadenopathy retrovirus. Nature (London) 313:450–457.
  • Pabo, C. O., and R. T. Sauer. 1984. Protein-DNA recognition. Annu. Rev. Biochem. 53:293–321.
  • Parkhurst, S. M., and V. G. Corces. 1985. Forked, gypsys and suppressors in Drosophila. Cell 41:429–437.
  • Pestka, S., B. L. Daugherty, V. Jung, K. Hotta, and R. K. Pestka. 1984. Anti-mRNA: specific inhibition of translation of single mRNA molecules. Proc. Natl. Acad. Sci. USA 81:7525–7528.
  • Potter, K. N., and L. K. Miller. 1980. Correlating genetic mutations of a baculovirus with the physical map of the DNA genome, p. 71–80. In B. N. Fields, R. Jamisch, and C. F. Fox (ed.), Animal virus genetics. Academic Press, Inc., New York.
  • Roeder, G. S., and G. R. Fink. 1983. Transposable elements in yeast, p. 299–328. In J. A. Shapiro (ed.), Mobile genetic elements. Academic Press, Inc., New York.
  • Rosen, C. A., J. S. Sodroski, and W. A. Hasehine. 1985. The location of cis-acting regulatory sequences in the human T cell lymphotropic virus type III (HTLV-III/LAV) long terminal repeat. Cell 41:813–823.
  • Rubin, G. M. 1983. Dispersed repetitive DNA in Drosophila, p. 329–361. In J. A. Shapiro (ed.), Mobile genetic elements. Academic Press, Inc., New York
  • Saigo, K., W. Kugimiya, Y. Mutasuo, S. Inouye, K. Yoshioka, and S. Yuki. 1984. Identification of the coding sequence for a reverse transcriptase-like enzyme in a transposable genetic element in Drosophila melanogaster. Nature (London) 312:659–661.
  • Sanchez-Pescador, R., M. D. Power, P. J. Barr, K. S. Steimer, M. M. Stempien, S. L. Brown-Shimer, W. W. Gee, A. Renard, A. Randolf, J. A. Levy, D. Dina, and P. A. Luciuw. 1985. Nucleotide sequence and expression of the AIDS-associated retrovirus (ARV-2). Science 227:484–492.
  • Sanger, F., S. Nicklen, and A. R. Coulson. 1977. DNA sequencing with chain terminating inhibitors. Proc. Natl. Acad. Sci. USA 74:5463–5467.
  • Sawadogo, M., and R. G. Roeder. 1985. Interaction of a genespecific transcription factor with the adenovirus major late promoter upstream of the TATA box region. Cell 43:164–175.
  • Starcich, B., L. Ratner, S. F. Joseph, T. Okamoto, R. C. Gallo, and F. Wong-Staal. 1985. Characterization of the long terminal repeat sequences of HTLV-III. Science 227:538–540.
  • Thomas, P. S. 1980. Hybridization of denatured RNA and small DNA fragments transferred to nitrocellulose. Proc. Natl. Acad. Sci. USA 77:5201–5205.
  • Varmus, H. E. 1983. Retroviruses, p. 411–503. In J. A. Shapiro (ed.), Mobile genetic elements. Academic Press, Inc., New York.
  • Varmus, H. E., N. Quintrell, and S. Ortiz. 1981. Retroviruses as mutagens: insertion and excision of a nontransforming provirus alter expression of a resident transforming pro virus. Cell 25:23–26.
  • Vaughn, J. L., R. H. Goodwin, G. L. Thompkins, and P. McCawley. 1977. Establishment of two insect cell lines from the insect Spodoptera frugiperda (Lepidoptera: Noctuidae). In Vitro 13:213–217.
  • Vieira, J., and J. Messing. 1982. The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with universal primers. Gene 19:259–268.
  • Wain-Hobson, S., P. Sonigo, O. Danos, S. Cole, and M. Allzon. 1985. Nucleotide sequence of the AIDS virus, LAV. Cell 40:9–17.
  • Weaver, R. F., and C. Weissman. 1979. Mapping of RNA by a modifiction of the Berk-Sharp procedure: the 5′ terminus of 15S β-globin mRNA precursor and mature 10S β-globin mRNA have identical map coordinates. Nucleic Acids Res. 7:1175–1193.
  • Weiher, H., M. König, and P. Gruss. 1983. Multiple point mutations affecting the simian virus 40 enhancer. Science 219:626–631.
  • Winston, F., K. J. Durbin, and G. R. Fink. 1984. The SPT3 gene is required for normal transcription of Ty elements in S. cerevisiae. Cell 39:675–682.
  • Wu, C. 1984. Activating protein factor binds in vitro to upstream control sequences in heat shock gene chromatin. Nature (London) 311:81–84.
  • Yanisch-Perron, C., J. Vieira, and J. Messing. 1985. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mpl8 and pUC19 vectors. Gene 33:103–119.
  • Zachar, Z., D. Davison, D. Garza, and P. M. Bingham. 1985. A detailed developmental and structural study of the transcriptional effects of the insertion of the copia transposon into the white locus of Drosophila melanogaster. Genetics 111:495–515.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.