46
Views
8
CrossRef citations to date
0
Altmetric
Original Article

The development of species-specific SCAR markers for delimitation of Calypogeia species

&
Pages 291-299 | Published online: 12 Nov 2013

REFERENCES

  • Adamczak M, Buczkowska K, Bączkiewicz A, Wachowiak W. 2005. Comparison of Allozyme Variability in Polish Populations of Two Species of Ptilidium Nees (Hepaticae) with Contrasting Degrees of Sexual Reproduction. Cryptogamie Bryology, 26, 151–65.
  • Albani MC, Battey NH, Wilkinson MJ. 2004. The Development of ISSR-derived SCAR Markers Around the Seasonal Flowering Locus (SFL) in Fragaria vesca. Theoretical and Applied Genetics, 109, 571–9.
  • Bischler H. 1963. The Genus Calypogeia Raddi in Central and South America. I–III. Candollea, 18, 19–128.
  • Boisselier-Dubayle MC, Lambourdiere J, Bischler H. 1998. The Leafy Liverwort Porella baueri (Porellaceae) is an Allopolyploid. Plant Systematics and Evolution, 210, 175–97.
  • Buczkowska K. 2004a. Genetic Differentiation of Calypogeia fissa Raddi (Hepaticae, Jungermanniales) in Poland. Plant Systematics and Evolution, 247, 187–201.
  • Buczkowska K. 2004b. The Genus Calypogeia Raddi (Hepaticae, Jungermanniales) in Poland, Biometrical Analysis of Morphological and Anatomical Variation. Nova Hedwigia, 78, 121–46.
  • Buczkowska K. 2010. Morphological Differentiation of Calypogeia muelleriana (Jungermanniales, Hepaticae) in Poland. Biodiversity Research and Conservation, 17, 23–32.
  • Buczkowska K, Adamczak M, Bączkiewicz A, Chudzińska E, Wachowiak W. 2006. In vitro Propagation of Cryptic Species of Aneura pinguis (Metzgeriales, Hepaticae). Cryptogamie, Bryologie, 27, 241–51.
  • Buczkowska K, Bączkiewicz A. 2011. New Taxon of the Genus Calypogeia (Jungermanniales, Hepaticae) in Poland. Acta Societatis Botanicorum Poloniae, 80(4): in press.
  • Buczkowska K, Bączkiewicz A, Sawicki J, Szczecińska M. 2009. Genetic Differentiation within Calypogeia sphagnicola (Jungermanniales, Hepaticae) in Poland. Nowellia Bryologica, special issue: 34–42.
  • Buczkowska K, Sawicki J, Szczecińska M, Klama H, Milewicz M, Bączkiewicz A. 2010. Genetic Variation in the Liverwort Bazzania trilobata Inferred from ISSR Markers. Journal of Bryology, 32, 265–74.
  • Cräutlein M, Korpelainen H, Pietiläinen M, Rikkinen J. 2011. DNA Barcoding: a Tool for Improved Taxon Identification and Detection of Species Diversity. Biodiversity and Conservation, 20, 373–89.
  • Damsholt K. 2002. Illustrated Flora of Nordic Liverworts and Hornworts. Lund: Nordic Bryological Society, pp. 45676.
  • Grolle R, Long DG. 2000. An Annotated Check-list of the Hepaticae and Anthocerotae of Europe and Macaronesia. Journal of Bryology, 22, 103–40.
  • Gunnarsson U, Hassel K, Söderström L. 2005. Genetic Structure of the Endangered Peatmoss Sphagnum angermanicum in Sweden – A Result of Historic or Contemporary Processes? Bryologist, 108, 194–202.
  • Hassel K, Gunnarsson U. 2003. The Use of Inter Simple Sequence Repeats (ISSR) in Bryophyte Population Studies. Lindbergia, 28, 152–7.
  • Hollingsworth ML, Clark AA, Forrest LL, Richardson J, Pennington RT, Long DG, Cowan R, Chase MW, Gaudeul M, Hollingsworth PM. 2009. Selecting Barcoding Loci for Plants: Evaluation of Seven Candidate Loci with Species-level Sampling in Three Divergent Groups of Land Plants. Molecular Ecology Resources, 9, 439–57.
  • Kauserud H, Mathiesen C, Ohlson M. 2008. High Diversity of Fungi Associated with Living Parts of Boreal Forest Bryophytes. Botany, 86, 1326–33.
  • Korpelainen H, Bisang I, Hedenäs L, Kolehmainen J. 2008. The First Sex-specific Molecular Marker Discovered in the Moss Pseudocalliergon trifarium. Journal of Heredity, 99, 581–7.
  • Kress WJ, Erickson DL. 2007. A Two-locus Global DNA Barcode for Land Plants: the Coding rbcL Gene Complements the Non-coding trnH-psbA Spacer Region. PLoS ONE. 2: e508 doi: 10·1371/journal.pone.0000508.
  • Kress WJ, Wurdack KJ, Zimmer EA, Weigt LA, Janzen DH. 2005. Use of DNA Barcodes to Identify Flowering Plants. Proceedings of the National Academy of Sciences, USA, 102, 8369–74.
  • Liu Y, Cao T, Ge XJ. 2011. A Case Study of DNA Barcoding in Chinese Grimmiaceae and a Moss Recorded in China for the First Time. Taxon, 60, 185–93.
  • Liu Y, Yan HF, Cao T, Ge XJ. 2010. Evaluation of 10 Plant Barcodes in Bryophyta (Mosses). Journal of Systematics and Evolution, 48, 36–46.
  • Lukavsky J, Kasparkova M, Keil M. 1991. Culture Collection of Mosses and Ferns. Bryological Times, 64, 8–9.
  • Mehes MS, Nkongolo KK, Michael P. 2007. Genetic Analysis of Pinus strobus and Pinus monticola Populations from Canada Using ISSR and RAPD Markers: Development of Genome-Specific SCAR Markers. Plant Systematics and Evolution, 267, 47–63.
  • Murray M, Thompson WF. 1980. Rapid Isolation of Molecular Weight Plant DNA. Nucleic Acids Research, 8, 4321–5
  • Natcheva R, Cronberg N. 2007. Recombination and Introgression of Nuclear and Chloroplast Genomes Between the Peat Moss, Sphagnum capillifolium and Sphagnum quinquefarium. Molecular Ecology, 16, 811–8.
  • Nei M. 1973. Analysis of Gene Diversity in Subdivided Populations. Proceedings of the National Academy of Sciences USA, 70, 3321–3.
  • Nei M. 1978. Estimation of Average Heterozygosity and Genetic Distance from a Small Number of Individuals. Genetics, 89, 583–90.
  • Nicholas KB, Nicholas HB. 1997. GeneDoc: a Tool for Editing and Annotating Multiple Sequence Alignments. Distributed by the Author. Pittsburgh: National Resource for Biomedical Supercomputing (accessed 7 May 2010. Available at: < http://www.nrbsc.org/.
  • Peakall R, Smouse P. 2005. genalex 6: Genetic Analysis in Excel. Population Genetic Software for Teaching and Research. Molecular Ecology Notes, 6, 288–95.
  • Plášek V, Sawicki J. 2010. Is the Hairy Vaginula a Diagnostic Feature in the Taxonomy of the Genus Orthotrichum? Acta Societatis Botanicorum Poloniae, 79, 73–80.
  • Rowntree JK, Cowan RS, Leggett M, Ramsay MM, Fay MF. 2010. Which Moss is Which? Identification of the Threatened Moss Orthodontium gracile Using Molecular and Morphological Techniques. Conservation Genetics, 11, 1033–42.
  • Sawicki J, Plášek V, Szczecińska M. 2010. Molecular Studies Resolve Nyholmiella (Orthotrichaceae) as a Separate Genus. Journal of Systematics and Evolution, 48, 183–94.
  • Schuster RM. 1969. The Hepaticae and Anthocerotae of North America. Vol. 2. New York and London: Columbia University Press, pp. 98–215.
  • Seberg O, Petersen G. 2009. How Many Loci Does it Take to DNA Barcode a Crocus? PLoS ONE, 4, e4598.
  • Spagnuolo V, Terracciano S, Cobianchi RC, Giordano S. 2008. Taxonomy of the Hypnum cupressiforme Complex in Italy Based on ITS and trnL Sequences and ISSR Markers. Journal of Bryology, 30, 283–9.
  • Stech M, Kolvoort E, Loonen MJJE, Vrieling K, Kruijer JD. 2011. Bryophyte DNA Sequences from Faeces of an Arctic Herbivore, Barnacle Goose (Branta leucopsis). Molecular Ecology Resources, 11, 404–8.
  • Szweykowski J. 2006. An Annotated Checklist of Polish Liverworts. In: , Mirek Z, ed. Biodiversity of Poland vol. 4. W. Szafer Institute of Botany. Kraków: Polish Academy of Sciences, pp. 18–20.
  • Taberlet P, Coissac E, Pompanon F, Gielly L, Miquel C, Valentini A, Vermat T, Corthier G, Brochmann C, Willerslev E. 2007. Power and Limitations of the Chroloplast trnL (UAA) Intron for Plant DNA Barcoding. Nucleic Acids Research, 35: e14 (3) 1–8 doi: 10·1093/nar/gkl.938.
  • Tamura K, Dudlmy J, Nei M, Kumar S. 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0. Molecular Biology and Evolution, 24, 1596–9.
  • Vanderpoorten A, Hedenäs L, Jacquemart AL. 2003. Differentiation in DNA Fingerprinting and Morphology Among Species of the Pleurocarpous Moss Genus, Rhytidiadelphus (Hylocomniaceae). Taxon, 52, 229–36.
  • Werner O, Ros RM, Guerra J, Shaw AJ. 2003. Molecular Data Confirm the Presence of Anacolia menziesii (Bartramiacear, Musci) in Southern Europe and its Separation from Anacolia webbii. Systematic Botany, 28, 483–9.
  • Ziętkiewicz E, Rafalski A, Labuda D. 1994. Genome Fingerprinting by Simple Sequence Repeat (SSR)-anchored Polymerase Chain Reaction Amplification. Genomics, 20, 176–83.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.