- 1) Kelly, T. J., and Brown, G. W., Regulation of chromosome replication. Annu. Rev. Biochem., 69, 829–880 (2000).
- 2) Newlon, C. S., and Theis, J. F., The structure and function of yeast ARS elements. Curr. Opin. Genet. Dev., 3, 752–758 (1993).
- 3) Yamashita, M., Hori, Y., Shinomiya, T., Obuse, C., Tsurimoto, T., Yoshikawa, H., and Shirahige, K., The efficiency and timing of initiation of replication of multiple replicons of Saccharomyces cerevisiae chromosome VI. Genes Cells, 2, 655–665 (1997).
- 4) Cimbora, D. M., and Groudine, M., The control of mammalian DNA replication: a brief history of space and timing. Cell, 104, 643–646 (2001).
- 5) Schwaiger, M., and Schubeler, D., A question of timing: emerging links between transcription and replication. Curr. Opin. Genet. Dev., 16, 177–183 (2006).
- 6) Takebayashi, S.-I., Sugimura, K., Saito, T., Sato, C., Fukushima, Y., Taguchi, H., and Okumura, K., Regulation of replication at the R/G chromosomal band boundary and pericentromeric heterochromatin of mammalian cells. Exp. Cell Res., 304, 162–174 (2005).
- 7) Selig, S., Okumura, K., Ward, D. C., and Cedar, H., Delineation of DNA replication time zones by fluorescence in situ hybridization. EMBO J., 11, 1217–1225 (1992).
- 8) Kagotani, K., Takebayashi, S., Kohda, A., Taguchi, H., Paulsen, M., Walter, J., Reik, W., and Okumura, K., Replication timing properties within the mouse distal chromosome 7 imprinting cluster. Biosci. Biotechnol. Biochem., 66, 1046–1051 (2002).
- 9) Jackson, D. A., and Pombo, A., Replicon clusters are stable units of chromosome structure: evidence that nuclear organization contributes to the efficient activation and propagation of S phase in human cells. J. Cell Biol., 140, 1285–1295 (1998).
- 10) Takebayashi, S.-I., Manders, E. M., Kimura, H., Taguchi, H., and Okumura, K., Mapping sites where replication initiates in mammalian cells using DNA fibers. Exp. Cell Res., 271, 263–268 (2001).
- 11) Anglana, M., Apiou, F., Bensimon, A., and Debatisse, M., Dynamics of DNA replication in mammalian somatic cells: nucleotide pool modulates origin choice and interorigin spacing. Cell, 114, 385–394 (2003).
- 12) Lebofsky, R., and Bensimon, A., DNA replication origin plasticity and perturbed fork progression in human inverted repeats. Mol. Cell. Biol., 25, 6789–6797 (2005).
- 13) Norio, P., Kosiyatrakul, S., Yang, Q., Guan, Z., Brown, N. M., Thomas, S., Riblet, R., and Schildkraut, C. L., Progressive activation of DNA replication initiation in large domains of the immunoglobulin heavy chain locus during B cell development. Mol. Cell, 20, 575–587 (2005).
- 14) Nogami, M., Nogami, O., Kagotani, K., Okumura, M., Taguchi, H., Ikemura, T., and Okumura, K., Intranuclear arrangement of human chromosome 12 correlates to large-scale replication domains. Chromosoma, 108, 514–522 (2000).
- 15) Burhans, W. C., Vassilev, L. T., Wu, J., Sogo, J. M., Nallaseth, F. S., and DePamphilis, M. L., Emetine allows identification of origins of mammalian DNA replication by imbalanced DNA synthesis, not through conservative nucleosome segregation. EMBO J., 10, 4351–4360 (1991).
- 16) Tenzen, T., Yamagata, T., Fukagawa, T., Sugaya, K., Ando, A., Inoko, H., Gojobori, T., Fujiyama, A., Okumura, K., and Ikemura, T., Precise switching of DNA replication timing in the GC content transition area in the human major histocompatibility complex. Mol. Cell. Biol., 17, 4043–4050 (1997).
- 17) Nogami, M., Kohda, A., Taguchi, H., Nakao, M., Ikemura, T., and Okumura, K., Relative locations of the centromere and imprinted SNRPN gene within chromosome 15 territories during the cell cycle in HL60 cells. J. Cell Sci., 113, 2157–2165 (2000).
- 18) Koberna, K., Stanek, D., Malinsky, J., Eltsov, M., Pliss, A., Ctrnacta, V., Cermanova, S., and Raska, I., Nuclear organization studied with the help of a hypotonic shift: its use permits hydrophilic molecules to enter into living cells. Chromosoma, 108, 325–335 (1999).
Full access
Non-Denaturing Fluorescence in Situ Hybridization to Find Replication Origins in a Specific Genome Region on the DNA Fiber
Reprints and Corporate Permissions
Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?
To request a reprint or corporate permissions for this article, please click on the relevant link below:
Academic Permissions
Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?
Obtain permissions instantly via Rightslink by clicking on the button below:
If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.
Related research
People also read lists articles that other readers of this article have read.
Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.
Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.