- 1) Kinoshita, S. and Nakayama, K., Amino acids. In “Primary products of metabolism”, ed. Rose, A. H., Academic Press, London, New York, San Francisco, pp. 209-261 (1978).
- 2) Oka, T., Amino acids, production processes. In “Encyclopedia of bioprocess technology: fermentation, biocatalysis, and bioseparation”, eds. Flickinger, M. C. and Drew, S. W., John Wiley & Sons, Inc, pp. 89-100 (1999).
- 3) Demain, A. L., Microbial biotechnology. Trends Biotechnol., 18, 26-31 (2000).
- 4) Schena, M., Shalon, D., Davis, R. W., and Brown, P. O., Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science, 270, 467-470 (1995).
- 5) Lucchini, S., Thompson, A., and Hinton, J. C. D., Microarrays for microbiologists. Microbiology, 147, 1403-1414 (2001).
- 6) Khodursky, A. B., Peter, B. J., Cozzarelli, N. R., Botstein, D., Brown, P. O., and Yanofsky, C., DNA microarray analysis of gene expression in response to physiological and genetic changes that affect tryptophan metabolism in Escherichia coli. Proc. Natl. Acad. Sci. U.S.A., 97, 12170-12175 (2000).
- 7) Oh, M. K. and Liao, J. C., Gene expression profiling by DNA microarrays and metabolic fluxes in Escherichia coli. Biotechnol. Prog., 16, 278-286 (2000).
- 8) Ye, R. W., Tao, W., Bedzyk, L., Young, T., Chen, M., and Li, L., Global gene expression profiles of Bacillus subtilis grown under anaerobic conditions. J. Bacteriol., 182, 4458-4465 (2000).
- 9) Yoshida, K., Kobayashi, K., Miwa, Y., Kang, C. M., Matsunaga, M., Yamaguchi, H., Tojo, S., Yamamoto, M., Nishi, R., Ogasawara, N., Nakayama, T., and Fujita, Y., Combined transcriptome and proteome analysis as a powerful approach to study genes under glucose repression in Bacillus subtilis. Nucleic Acids Res., 29, 683-692 (2001).
- 10) Loos, A., Glanemann, C., Willis, L. B., O'Brien, X. M., Lessard, P. A., Gerstmeir, R., Guillouet, S., and Sinskey, A. J., Development and validation of Corynebacterium DNA microarrays. Appl. Environ. Microbiol., 67, 2310-2318 (2001).
- 11) Nakagawa, S., Mizoguchi, H., Ando, S., Hayashi, M., Ochiai, K., Yokoi, H., Tateishi, N., Senoh, A., Ikeda, M., and Ozaki, A., Eur. Patent 1108790 (June 20, 2001).
- 12) Ohnishi, J., Mitsuhashi, S., Hayashi, M., Ando, S., Yokoi, H., Ochiai, K., and Ikeda, M., A novel methodology employing Corynebacterium glutamicum genome information to generate a new L-lysine-producing mutant. Appl. Microbiol. Biotechnol., 58, 217-223 (2002).
- 13) Wendisch, V. F., Spies, M., Reinscheid, D. J., Schnicke, S., Sahm, H., and Eikmanns, B. J., Regulation of acetate metabolism in Corynebacterium glutamicum: transcriptional control of the isocitrate lyase and malate synthase genes. Arch. Microbiol., 168, 262-269 (1997).
- 14) Reinscheid, D. J., Schnicke, S., Rittmann, D., Zahnow, U., Sahm, H., and Eikmanns, B. J., Cloning, sequence analysis, expression and inactivation of the Corynebacterium glutamicum pta-ack operon encoding phosphotransacetylase and acetate kinase. Microbiology, 145, 503-513 (1999).
- 15) Katsumata, R., Ozaki, A., Oka, T., and Furuya, A., Protoplast transformation of glutamate-producing bacteria with plasmid DNA. J. Bacteriol., 159, 306-311 (1984).
- 16) Eikmanns, B. J., Metzger, M., Reinscheid, D., Kircher, M., and Sahm, H., Amplification of three threonine biosynthesis genes in Corynebacterium glutamicum and its influence on carbon flux in different strains. Appl. Microbiol. Biotechnol., 34, 617-622 (1991).
- 17) Sambrook, J., and Russell, D. W., Molecular cloning: a laboratory manual, 3rd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York (2001).
- 18) Mangan, J. A., Sole, K. M., Mitchison, D. A., and Butcher, P. D., An effective method of RNA extraction from bacteria refractory to disruption, including mycobacteria. Nucleic Acids Res., 25, 675-676 (1997).
- 19) Wilson, M., DeRisi, J., Kristensen, H., Imboden, P., Rane, S., Brown, P. O., and Schoolnik, G. K., Exploring drug-induced alterations in gene expression in Mycobacterium tuberculosis by microarray hybridization. Proc. Natl. Acad. Sci. U.S.A., 96, 12833-12838 (1999).
- 20) Wendisch, V. F., de Graaf, A. A., Sahm, H., and Eikmanns, B. J., Quantitative determination of metabolic fluxes during coutilization of two carbon sources: comparative analyses with Corynebacterium glutamicum during growth on acetate and/or glucose. J. Bacteriol., 182, 3088-3096 (2000).
- 21) Cronan, J. E. and Jr.; Laporte, D., Tricarboxylic acid cycle and glyoxylate bypass. In “Escherichia coli and Salmonella”, ed. Neidhardt, F. C., ASM press, Washington, D. C., pp. 206-216 (1999).
- 22) Riedel, C., Rittmann, D., Dangel, P., Mockel, B., Petersen, S., Sahm, H., and Eikmanns, B. J., Characterization of the phosphoenolpyruvate carboxykinase gene from Corynebacterium glutamicum and significance of the enzyme for growth and amino acid production. J. Mol. Microbiol. Biotechnol., 3, 573-583 (2001).
- 23) Gourdon, P., Baucher, M. F., Lindley, N. D., and Guyonvarch, A., Cloning of the malic enzyme gene from Corynebacterium glutamicum and role of the enzyme in lactate metabolism. Appl. Environ. Microbiol., 66, 2981-2987 (2000).
- 24) Carter-Muenchau, P. and Wolf, R. E., Growth-rate-dependent regulation of 6-phosphogluconate dehydrogenase level mediated by an anti-Shine-Dalgarno sequence located within the Escherichia coli gnd structural gene. Pro. Natl. Acad. Sci. U.S.A., 86, 1138-1142 (1989).
- 25) Eikmanns, B. J., Identification, sequence analysis, and expression of a Corynebacterium glutamicum gene cluster encoding the three glycolytic enzymes glyceraldehyde-3-phosphate dehydrogenase, 3-phospholycerate kinase, and triosephosphate isomerase. J. Bacteriol., 174, 6076-6086 (1992).
- 26) Fillinger, S., Boschi-Muller, S., Azza, S., Dervyn, E., Branlant, G., and Aymerich, S., Two glyceraldehyde-3-phosphate dehydrogenases with opposite physiological roles in a nonphotosynthetic bacterium. J. Biol. Chem., 275, 14031-14037 (2000).
Full access
Transcriptome Analysis of Acetate Metabolism in Corynebacterium glutamicum Using a Newly Developed Metabolic Array
Reprints and Corporate Permissions
Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?
To request a reprint or corporate permissions for this article, please click on the relevant link below:
Academic Permissions
Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?
Obtain permissions instantly via Rightslink by clicking on the button below:
If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.
Related research
People also read lists articles that other readers of this article have read.
Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.
Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.