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Original Articles

Mode of AmyR Binding to the CGGN8AGG Sequence in the Aspergillus oryzaetaaG2 Promoter

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Pages 1906-1911 | Received 12 Apr 2004, Accepted 15 Jun 2004, Published online: 22 May 2014

  • 1) Kato, M., Sekine, K., and Tsukagoshi, N., Sequence-specific binding sites in the Taka-amylase A G2 promoter for the CreA repressor mediating carbon catabolite repression. Biosci. Biotechnol. Biochem., 60, 1776–1779 (1996).
  • 2) Kato, M., Aoyama, A., Naruse, F., Kobayashi, T., and Tsukagoshi, N., An Aspergillus nidulans nuclear protein, AnCP, involved in enhancement of Taka-amylase A gene expression, binds to the CCAAT-containing taaG2, amdS, and gatA promoters. Mol. Gen. Genet., 254, 119–126 (1997).
  • 3) Kato, M., Aoyama, A., Naruse, F., Tateyama, Y., Hayashi, K., Miyazaki, M., Papagiannopoulos, P., Davis, M. A., Hynes, M. T., Kobayashi, T., and Tsukagoshi, N., The Aspergillus nidulans CCAAT-binding factor AnCP/AnCF is a heteromeric protein analogous to the HAP complex of Saccharomyces cerevisiae. Mol. Gen. Genet., 257, 404–411 (1998).
  • 4) Nagata, O., Takashima, T., Tanaka, M., and Tsukagoshi, N., Aspergillus nidulans nuclear proteins bind to a CCAAT element and the adjacent upstream sequence in the promoter region of the starch-inducible Taka-amylase gene. Mol. Gen. Genet., 237, 251–260 (1993).
  • 5) Tani, S., Kawaguchi, T., Kato, M., Kobayashi, T., and Tsukagoshi, N., A novel nuclear factor, SREB, binds to a cis-acting element, SRE, required for inducible expression of the Aspergillus oryzae Taka-amylase A gene in A. nidulans. Mol. Gen. Genet., 263, 232–238 (2000).
  • 6) Minetoki, T., Nunokawa, Y., Gomi, K., Kitamoto, K., Kumagai, C., and Tamura, G., Deletion analysis of promoter elements of the Aspergillus oryzae agdA gene encoding α-glucosidase. Curr. Genet., 30, 432–438 (1996).
  • 7) Gomi, K., Akeno, T., Minetoki, T., Ozeki, K., Kumagai, C., and Iimura, Y., Molecular cloning and characterization of a transcriptional activator gene, amyR, involved in the amylolytic gene expression in Aspergillus oryzae. Biosci. Biotechnol. Biochem., 64, 816–827 (2000).
  • 8) Petersen, K. L., Lehmbeck, J., and Christensen, J., A new transcriptional activator for amylase genes in Aspergillus. Mol. Gen. Genet., 262, 668–676 (1999).
  • 9) Carey, M., Kakidani, H., Leatherwood, J., Mostashari, F., and Ptashne, M., An amino-terminal fragment of GAL4 binds DNA as a dimer. J. Mol. Biol., 209, 423–432 (1989).
  • 10) Marmorstein, R., Carey, M., Ptashne, M., and Harrison, S. C., DNA recognition by GAL4: structure of a protein-DNA complex. Nature, 356, 408–414 (1992).
  • 11) Swaminathan, K., Flynn, P., Reece, R. J., and Marmorstein, R., Crystal structure of a PUT3-DNA complex reveals a novel mechanism for DNA recognition by a protein containing a Zn2Cys6 binuclear cluster. Nat. Struct. Biol., 4, 751–759 (1997).
  • 12) Marmorstein, R., and Harrison, S. C., Crystal structure of a PPR1-DNA complex: DNA recognition by proteins containing a Zn2Cys6 binuclear cluster. Genes Dev., 8, 2504–2512 (1994).
  • 13) Hellauer, K., Rochon, M. H., and Turcotte, B., A novel DNA binding motif for yeast zinc cluster proteins: the Leu3p and Pdr3p transcriptional activators recognize everted repeats. Mol. Cell. Biol., 16, 6096–6102 (1996).
  • 14) King, D. A., Zhang, L., Guarente, L., and Marmorstein, R., Structure of a HAP1-DNA complex reveals dramatically asymmetric DNA binding by a homodimeric protein. Nat. Struct. Biol., 6, 64–71 (1999).
  • 15) Tani, S., Katsuyama, Y., Hayashi, T., Suzuki, H., Kato, M., Gomi, K., Kobayashi, T., and Tsukagoshi, N., Characterization of the amyR gene encoding a transcriptional activator for the amylase genes in Aspergillus nidulans. Curr. Genet., 39, 10–15 (2001).
  • 16) Tani, S., Itoh, T., Kato, M., Kobayashi, T., and Tsukagoshi, N., In vivo and in vitro analyses of the AmyR binding site of the Aspergillus nidulansagdA promoter; requirement of the CGG direct repeat for induction and high affinity binding of AmyR. Biosci. Biotechnol. Biochem., 65, 1568–1574 (2001).
  • 17) Balance, D. J., and Turner, G., Development of a high frequency transforming vector for Aspergillus nidulans. Gene, 36, 321–331 (1985).
  • 18) Rowlands, R. T., and Turner, G., Nuclear and extranuclear inheritance of oligomycin resistance in Aspergillus nidulans. Mol. Gen. Genet., 126, 201–206 (1973).
  • 19) Lederberg, E. M., and Cohen, S. N., Transformation of Salmonella typhimurium by plasmid DNA. J. Bacteriol., 119, 1072–1074 (1974).
  • 20) Higuchi, R., “Recombinant PCR”, eds. Innis, M. A., Gelfand, D. H., Sininsky, J. J., and White, T. J., Academic Press, San Diego, pp. 177–183 (1990).
  • 21) Tsukagoshi, N., Furusawa, M., Nagaba, H., Kirita, N., Tuboi, A., and Udaka, S., Isolation of a cDNA encoding Aspergillus oryzae Taka-amylase A: evidence for multiple related genes. Gene, 84, 319–327 (1989).
  • 22) Sambrook, J., Fritsch, E. F., and Maniatis, T., Molecular cloning: a laboratory manual, 2nd ed., Cold Spring Harbor Laboratory, Cold Spring Harbor, N. Y. (1989).
  • 23) Nelson, N., A photometric adaptation of the Somogyi method for the determination of glucose. J. Biol. Chem., 153, 375–380 (1944).
  • 24) Chikamatsu, G., Shirai, K., Kato, M., Kobayashi, T., and Tsukagoshi, N., Structure and expression properties of the endo-β-1, 4-glucanase A gene from a filamentous fungus Aspergillus nidulans. FEMS Microbiol. Lett., 179, 239–245 (1999).
  • 25) Lodi, T., and Guiard, B., Complex transcriptional regulation of the Saccharomyces cerevisiaeCYB2 gene encoding cytochrome b2: CYP1 (HAP1) activator binds to the CYB2 gene upstream activation site UAS1-B2. Mol. Cell. Biol., 11, 3762–3772 (1991).
  • 26) Winkler, H., Adam, G., Mattes, E., Schanz, M., Hartig, A., and Ruis, H., Co-ordinate control of synthesis of mitochondrial and non-mitochondrial hemoproteins: a binding site for the HAP1 (CYP1) protein in the UAS region of the yeast catalase T gene (CTT1). EMBO J., 7, 1799–1804 (1988).
  • 27) Pfeifer, K., Prezant, T., and Guarente, L., Yeast HAP1 activator binds two upstream activation sites of different sequence. Cell, 49, 19–27 (1987).

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