Micropatterned surfaces: techniques and applications in cell biology

Bibliography

• Hynes RO. Integrins: bidirectional, allosteric signaling machines. Cell 2002;110(6):673-87
   PubMed Web of Science ®Google Scholar
• Chung BG, Kang L, Khademhosseini A. Micro- and nanoscale technologies for tissue engineering and drug discovery applications. Expert Opin Drug Discov 2007;2(12):1653-68
   PubMed Web of Science ®Google Scholar
• Abhyankar VV, Beebe DJ. Spatiotemporal micropatterning of cells on arbitrary substrates. Anal Chem 2007;79(11):4066-73
   PubMed Web of Science ®Google Scholar
• Lee LH, Peerani R, Ungrin M, Micropatterning of human embryonic stem cells dissects the mesoderm and endoderm lineages. Stem Cell Res 2009;2(2):155
   PubMed Web of Science ®Google Scholar
• Martinez E, Lagunas A, Mills CA, Stem cell differentiation by functionalized micro- and nanostructured surfaces. Nanomedicine 2009;4(1):65-82
   PubMed Web of Science ®Google Scholar
• Falconnet D, Csucs G, Grandin HM, Textor M. Surface engineering approaches to micropattern surfaces for cell-based assays. Biomaterials 2006;27(16):3044-63
   PubMed Web of Science ®Google Scholar
• Jung DR, Kapur R, Adams T, Topographical and physicochemical modification of material surface to enable patterning of living cells. Crit Rev Biotechnol 2001;21(2):111-54
   PubMed Web of Science ®Google Scholar
• Quist AP, Pavlovic E, Oscarsson S. Recent advances in microcontact printing. Anal Bioanal Chem 2005;381(3):591-600
   PubMed Web of Science ®Google Scholar
• Carter SB. Principles of cell motility – direction of cell movement and cancer invasion. Nature 1965;208(5016):1183-7
   PubMed Web of Science ®Google Scholar
• Bhatia SN, Balis UJ, Yarmush ML, Toner M. Microfabrication of hepatocyte/fibroblast co-cultures: Role of homotypic cell interactions. Biotechnol Prog 1998;14(3):378-87
   PubMed Web of Science ®Google Scholar
• Whitesides GM, Ostuni E, Takayama S, Soft lithography in biology and biochemistry. Annu Rev Biomed Eng 2001;3:335-73
   PubMed Web of Science ®Google Scholar
• Kumar A, Whitesides GM. Features of gold having micrometer to centimeter dimensions can be formed through a combination of stamping with an elastomeric stamp and an alkanethiol ink followed by chemical etching. Appl Phys Lett 1993;63(14):2002-4
   Web of Science ®Google Scholar
• Guo QJ, Teng XW, Rahman S, Yang H. Patterned Langmuir-Blodgett films of mondisperse nanoparticles of iron oxide using soft lithography. J Am Chem Soc 2003;125(3):630-1
   PubMed Web of Science ®Google Scholar
• Schmalenberg KE, Buettner HM, Uhrich KE. Microcontact printing of proteins on oxygen plasma-activated poly(methyl methacrylate). Biomaterials 2004;25(10):1851-7
   PubMed Web of Science ®Google Scholar
• Xu C, Taylor P, Ersoz M, Microcontact printing of DNA-surfactant arrays on solid substrates. J Mater Chem 2003;13(12):3044-8
   Web of Science ®Google Scholar
• Rogers JA, Paul KE, Whitesides GM. Quantifying distortions in soft lithography. J Vac Sci Technol B 1998;16(1):88-97
   Web of Science ®Google Scholar
• He QU, Liu ZC, Xiao PF, Angular evaluation to quantify planar distortions of PDMS stamps in soft lithography. Mater Chem Phys 2004;83(1):60-5
   Web of Science ®Google Scholar
• Burgin T, Choong VE, Maracas G. Large area submicrometer contact printing using a contact aligner. Langmuir 2000;16(12):5371-5
   Web of Science ®Google Scholar
• Nikitov SA, Presmanes L, Tailhades P, Balabanov DE. Magnetic duplication and contact printing method. J Magn Magn Mater 2002;241(1):124-30
   Web of Science ®Google Scholar
• Pavlovic E, Quist AP, Nyholm L, Patterned generation of reactive thiolsulfinates/thiolsulfonates on silicon oxide by electrooxidation using electromicrocontact printing. Langmuir 2003;19(24):10267-70
   Web of Science ®Google Scholar
• Hoeppener S, Maoz R, Sagiv J. Constructive microlithography: electrochemical printing of monolayer template patterns extends constructive nanolithography to the micrometer-millimeter dimension range. Nano Lett 2003;3(6):761-7
   Web of Science ®Google Scholar
• Lee KB, Kim DJ, Lee ZW, Pattern generation of biological ligands on a biodegradable poly(glycolic acid) film. Langmuir 2004;20(7):2531-5
   PubMed Web of Science ®Google Scholar
• Jun Y, Cha T, Guo A, Zhu XY. Patterning protein molecules on poly(ethylene glycol) coated Si(111). Biomaterials 2004;25(17):3503-9
   PubMed Web of Science ®Google Scholar
• Brock A, Chang E, Ho CC, Geometric determinants of directional cell motility revealed using microcontact printing. Langmuir 2003;19(5):1611-7
   PubMed Web of Science ®Google Scholar
• Krsko P, McCann TE, Thach TT, Length-scale mediated adhesion and directed growth of neural cells by surface-patterned poly(ethylene glycol) hydrogels. Biomaterials 2009;30(5):721-9
   PubMed Web of Science ®Google Scholar
• Wilhelm T, Wittstock G. Generation of periodic enzyme patterns by soft lithography and activity imaging by scanning electrochemical microscopy. Langmuir 2002;18(24):9485-93
   Web of Science ®Google Scholar
• Schena M, Shalon D, Davis RW, Brown PO. Quantitative monitoring of gene-expression patterns with a complementary-DNA microarray. Science 1995;270(5235):467-70
   PubMed Web of Science ®Google Scholar
• Barbulovic-Nad I, Lucente M, Sun Y, Bio-microarray fabrication techniques – a review. Crit Rev Biotechnol 2006;26(4):237-59
   PubMed Web of Science ®Google Scholar
• Lausted C, Dahl T, Warren C, POSaM: a fast, flexible, open-source, inkjet oligonucleotide synthesizer and microarrayer. Genome Biol 2004;5(8):R58
   PubMedGoogle Scholar
• Lee KB, Park SJ, Mirkin CA, Protein nanoarrays generated by dip-pen nanolithography. Science 2002;295(5560):1702-5
   PubMed Web of Science ®Google Scholar
• Lee SW, Oh B-K, Sanedrin RG, Biologically active protein nanoarrays generated using parallel dip-pen nanolithography. Adv Mater 2006;18(9):1133-6
   Web of Science ®Google Scholar
• Curran J, Chen R, Stokes R, Nanoscale definition of substrate materials to direct human adult stem cells towards tissue specific populations. J Mater Sci Mater Med 2010;21(3):1021-9
   PubMed Web of Science ®Google Scholar
• Nahmias Y, Schwartz RE, Verfaillie CM, Odde DJ. Laser-guided direct writing for three-dimensional tissue engineering. Biotechnol Bioeng 2005;92(2):129-36
   PubMed Web of Science ®Google Scholar
• Ratner BD, Bryant SJ. Biomaterials: Where we have been and where we are going. Annu Rev Biomed Eng 2004;6(1):41-75
   PubMedGoogle Scholar
• Zhang MQ, Desai T, Ferrari M. Proteins and cells on PEG immobilized silicon surfaces. Biomaterials 1998;19(10):953-60
   PubMed Web of Science ®Google Scholar
• Drumheller PD, Hubbell JA. Densely cross-linked polymer networks of poly(ethylene glycol) in trimethylolpropane triacrylate for cell adhesion resistant surfaces. J Biomed Mater Res 1995;29(2):207-15
   PubMed Web of Science ®Google Scholar
• Desai NP, Hossainy SFA, Hubbell JA. Surface-immobilized polyethylene oxide for bacterial repellence. Biomaterials 1992;13(7):417-20
   PubMed Web of Science ®Google Scholar
• Barber TA, Golledge SL, Castner DG, Healy KE. Peptide-modified p(AAm-co-EG/AAc) IPNs grafted to bulk titanium modulate osteoblast behavior in vitro. J Biomed Mater Res A 2003;64(1):38-47
   PubMedGoogle Scholar
• Ostuni E, Chapman RG, Holmlin RE, A survey of structure-property relationships of surfaces that resist the adsorption of protein. Langmuir 2001;17(18):5605-20
   Web of Science ®Google Scholar
• Revzin A, Tompkins RG, Toner M. Surface engineering with poly(ethylene glycol) photolithography to create high-density cell arrays on glass. Langmuir 2003;19(23):9855-62
   Web of Science ®Google Scholar
• Schwendel D, Dahint R, Herrwerth S, Temperature dependence of the protein resistance of poly- and oligo(ethylene glycol)-terminated alkanethiolate monolayers. Langmuir 2001;17(19):5717-20
   Web of Science ®Google Scholar
• Li JT, Caldwell KD. Plasma protein interactions with Pluronic(TM)-treated colloids. Colloids Surf B Biointerfaces 1996;7(1-2):9-22
   Web of Science ®Google Scholar
• Neff JA, Tresco PA, Caldwell KD. Surface modification for controlled studies of cell-ligand interactions. Biomaterials 1999;20(23-24):2377-93
   PubMed Web of Science ®Google Scholar
• Trmcic-Cvitas J, Hasan E, Ramstedt M, Biofunctionalized protein resistant oligo(ethylene glycol)-derived polymer brushes as selective immobilization and sensing platforms. Biomacromolecules 2009;10(10):2885-94
   PubMed Web of Science ®Google Scholar
• Vogt AK, Lauer L, Knoll W, Offenhausser A. Micropatterned substrates for the growth of functional neuronal networks of defined geometry. Biotechnol Prog 2003;19(5):1562-8
   PubMed Web of Science ®Google Scholar
• Rozkiewicz DI, Kraan Y, Werten MWT, Covalent microcontact printing of proteins for cell patterning. Chem Eur J 2006;12(24):6290-7
   PubMed Web of Science ®Google Scholar
• Wong JY, Langer R, Ingber DE. Electrically conducting polymers can noninvasively control the shape and growth of mammalian cells. Proc Natl Acad Sci USA 1994;91(8):3201-4
   PubMed Web of Science ®Google Scholar
• Argun AA, Aubert P-H, Thompson BC, Multicolored electrochromism in polymers: structures and devices. Chem Mater 2004;16(23):4401-12
   Web of Science ®Google Scholar
• Wang X, Berggren M, Inganäs O. Dynamic control of surface energy and topography of microstructured conducting polymer films. Langmuir 2008;24(11):5942-8
   PubMed Web of Science ®Google Scholar
• Yamato M, Konno C, Koike S, Nanofabrication for micropatterned cell arrays by combining electron beam-irradiated polymer grafting and localized laser ablation. J Biomed Mater Res A 2003;67(4):1065-71
   PubMedGoogle Scholar
• Fink J, Thery M, Azioune A, Comparative study and improvement of current cell micro-patterning techniques. Lab Chip 2007;7(6):672-80
   PubMed Web of Science ®Google Scholar
• Chen CS, Mrksich M, Huang S, Geometric control of cell life and death. Science 1997;276(5317):1425-8
   PubMed Web of Science ®Google Scholar
• Chen CS, Mrksich M, Huang S, Micropatterned surfaces for control of cell shape, position, and function. Biotechnol Prog 1998;14(3):356-63
   PubMed Web of Science ®Google Scholar
• Christman KL, Enriquez-Rios VD, Maynard HD. Nanopatterning proteins and peptides. Soft Matter 2006;2(11):928-39
   Web of Science ®Google Scholar
• Dalby MJ, Childs S, Riehle MO, Fibroblast reaction to island topography: changes in cytoskeleton and morphology with time. Biomaterials 2003;24(6):927-35
   PubMed Web of Science ®Google Scholar
• Lee SH, Moon JJ, West JL. Three-dimensional micropatterning of bioactive hydrogels via two-photon laser scanning photolithography for guided 3D cell migration. Biomaterials 2008;29(20):2962-8
   PubMed Web of Science ®Google Scholar
• Sniadecki N, Desai RA, Ruiz SA, Chen CS. Nanotechnology for cell-substrate interactions. Ann Biomed Eng 2006;34(1):59-74
   PubMed Web of Science ®Google Scholar
• Ellis-Behnke R. Nano neurology and the four P's of central nervous system regeneration: Preserve, permit, promote, plasticity. Med Clin North Am 2007;91(5):937-62
   PubMed Web of Science ®Google Scholar
• Fawcett JW, Asher RA. The glial scar and central nervous system repair. Brain Res Bull 1999;49(6):377-91
   PubMed Web of Science ®Google Scholar
• Geller HM, Fawcett JW. Building a bridge: engineering spinal cord repair. Exp Neurol 2002;174(2):125-36
   PubMed Web of Science ®Google Scholar
• Golden KL, Pearse DD, Blits B, Transduced Schwann cells promote axon growth and myelination after spinal cord injury. Exp Neurol 2007;207(2):203-17
   PubMed Web of Science ®Google Scholar
• Schmidt CE, Leach JB. Neural tissue engineering: strategies for repair and regeneration. Annu Rev Biomed Eng 2003;5:293-347
   PubMed Web of Science ®Google Scholar
• Strain AJ, Neuberger JM. A bioartificial liver – State of the art. Science 2002;295(5557):1005-9
   PubMed Web of Science ®Google Scholar
• Frasca G, Gazeau F, Wilhelm C. Formation of a three-dimensional multicellular assembly using magnetic patterning. Langmuir 2009;25(4):2348-54
   PubMed Web of Science ®Google Scholar
• Kane BJ, Zinner MJ, Yarmush ML, Toner M. Liver-specific functional studies in a microfluidic array of primary mammalian hepatocytes. Anal Chem 2006;78(13):4291-8
   PubMed Web of Science ®Google Scholar
• Zelzer M, Majani R, Bradley JW, Investigation of cell-surface interactions using chemical gradients formed from plasma polymers. Biomaterials 2008;29(2):172-84
   PubMed Web of Science ®Google Scholar
• Yang J, Rose F, Gadegaard N, Alexander MR. A high-throughput assay of cell-surface interactions using topographical and chemical gradients. Adv Mater 2009;21(3):300-4
   Web of Science ®Google Scholar
• Hart T, Zhao A, Garg A, Human cell chips: adapting DNA microarray spotting technology to cell-based imaging assays. PLoS One 2009;4(10):e7088
   PubMedGoogle Scholar
• Heyries KA, Mandon CA, Ceriotti L, "Macromolecules to PDMS transfer" as a general route for PDMS biochips. Biosens Bioelectron 2009;24(5):1146-52
   PubMed Web of Science ®Google Scholar
• Salim A, Ding ZW, Ziaie B. Micromachined hydrogel stamper for soft printing of biomolecules with adjustable feature dimensions. Anal Chem 2009;81(11):4551-4
   PubMed Web of Science ®Google Scholar
• Cordey M, Limacher M, Kobel S, Enhancing the reliability and throughput of neurosphere culture on hydrogel microwell arrays. Stem Cells 2008;26(10):2586-94
   PubMed Web of Science ®Google Scholar
• Mercey E, Obeïd P, Glaise D, The application of 3D micropatterning of agarose substrate for cell culture and in situ comet assays. Biomaterials 2010;31(12):3156-65
   PubMed Web of Science ®Google Scholar
• Baselt DR, Lee GU, Colton RJ. Biosensor based on force microscope technology. J Vac Sci Technol B 1996;14(2):789-93
   Web of Science ®Google Scholar
• Diaz-Gonzalez M, Gonzalez-Garcia MB, Costa-Garcia A. Recent advances in electrochemical enzyme immunoassays. Electroanalysis 2005;17(21):1901-18
   Web of Science ®Google Scholar
• Homola J. Present and future of surface plasmon resonance biosensors. Anal Bioanal Chem 2003;377(3):528-39
   PubMed Web of Science ®Google Scholar
• Rossier JS, Girault HH. Enzyme linked immunosorbent assay on a microchip with electrochemical detection. Lab Chip 2001;1(2):153-7
   PubMed Web of Science ®Google Scholar
• Bilitewski U. Protein-sensing assay formats and devices. Anal Chim Acta 2006;568(1-2):232-47
   PubMed Web of Science ®Google Scholar
• Cesaro-Tadic S, Dernick G, Juncker D, High-sensitivity miniaturized immunoassays for tumor necrosis factor a using microfluidic systems. Lab Chip 2004;4(6):563-9
   PubMed Web of Science ®Google Scholar
• Juncker D, Schmid H, Drechsler U, Autonomous microfluidic capillary system. Anal Chem 2002;74(24):6139-44
   PubMed Web of Science ®Google Scholar
• Zimmermann M, Schmid H, Hunziker P, Delamarche E. Capillary pumps for autonomous capillary systems. Lab Chip 2007;7(1):119-25
   PubMed Web of Science ®Google Scholar
• Bernard A, Michel B, Delamarche E. Micromosaic immunoassays. Anal Chem 2001;73(1):8-12
   PubMed Web of Science ®Google Scholar
• Ziegler J, Zimmermann M, Hunziker P, Delamarche E. High-performance immunoassays based on through-stencil patterned antibodies and capillary systems. Anal Chem 2008;80(5):1763-9
   PubMed Web of Science ®Google Scholar
• Lein P, Silbergeld E, Locke P, Goldberg AM. In vitro and other alternative approaches to developmental neurotoxicity testing (DNT). Environ Toxicol Pharmacol 2005;19(3):735-44
   PubMed Web of Science ®Google Scholar
• Radio NM, Mundy WR. Developmental neurotoxicity testing in vitro: Models for assessing chemical effects on neurite outgrowth. NeuroToxicology 2008;29(3):361-76
   PubMed Web of Science ®Google Scholar
• Vutskits L, Gascon E, Tassonyi E, Kiss JZ. Effect of ketamine on dendritic arbor development and survival of immature GABAergic neurons In vitro. Toxicol Sci 2006;91(2):540-9
   PubMed Web of Science ®Google Scholar
• Liu D, McIlvain HB, Fennell M, Screening of immunophilin ligands by quantitative analysis of neurofilament expression and neurite outgrowth in cultured neurons and cells. J Neurosci Methods 2007;163(2):310-20
   PubMed Web of Science ®Google Scholar
• Radio NM, Breier JM, Shafer TJ, Mundy WR. Assessment of chemical effects on neurite outgrowth in PC12 cells using high content screening. Toxicol Sci 2008;105(1):106-18
   PubMed Web of Science ®Google Scholar
• Frimat J-P, Sisnaiske J, Subbiah S, The network formation assay: a spatially standardized neurite outgrowth analytical display for neurotoxicity screening. Lab Chip 2010;10(6):701-9
   PubMed Web of Science ®Google Scholar
• Schwarzenbacher M, Kaltenbrunner M, Brameshuber M, Micropatterning for quantitative analysis of protein-protein interactions in living cells. Nat Methods 2008;5(12):1053-60
   PubMed Web of Science ®Google Scholar
• Quist AP, Chand A, Ramachandran S, Atomic force microscopy imaging and electrical recording of lipid bilayers supported over microfabricated silicon chip nanopores: lab-on-a-chip system for lipid membranes and ion channels. Langmuir 2006;23(3):1375-80
   Web of Science ®Google Scholar
• Hwang NS, Varghese S, Elisseeff J. Controlled differentiation of stem cells. Adv Drug Deliv Rev 2008;60(2):199-214
   PubMed Web of Science ®Google Scholar
• Ding S, Schultz PG. A role for chemistry in stem cell biology. Nat Biotechnol 2004;22(7):833-40
   PubMed Web of Science ®Google Scholar
• Kong HJ, Mooney DJ. Microenvironmental regulation of biomacromolecular therapies. Nat Rev Drug Discov 2007;6(6):455-63
   PubMed Web of Science ®Google Scholar
• Lim JY, Donahue HJ. Cell sensing and response to micro- and nanostructured surfaces produced by chemical and topographic patterning. Tissue Eng 2007;13(8):1879-91
   PubMedGoogle Scholar
• Peerani R, Rao BM, Bauwens C, Niche-mediated control of human embryonic stem cell self-renewal and differentiation. EMBO J 2007;26(22):4744
   PubMed Web of Science ®Google Scholar
• Ostuni E, Kane R, Chen CS, Patterning mammalian cells using elastomeric membranes. Langmuir 2000;16(20):7811-9
   Web of Science ®Google Scholar
• Wang W, Itaka K, Ohba S, 3D spheroid culture system on micropatterned substrates for improved differentiation efficiency of multipotent mesenchymal stem cells. Biomaterials 2009;30(14):2705-15
   PubMed Web of Science ®Google Scholar
• Tang J, Peng R, Ding J. The regulation of stem cell differentiation by cell-cell contact on micropatterned material surfaces. Biomaterials 2009;31(9):2470-6
   PubMed Web of Science ®Google Scholar
• Trkov S, Eng G, Di Liddo R, Micropatterned three-dimensional hydrogel system to study human endothelial-mesenchymal stem cell interactions. J Tissue Eng Regen Med 2010;4(3):205-15
   PubMed Web of Science ®Google Scholar
• Lindstrom S, Eriksson M, Vazin T, High-density microwell chip for culture and analysis of stem cells. PLoS One 2009;4(9):e6997
   PubMedGoogle Scholar