Revised Phylogenetic Relationships among Herpesviruses Isolated from Sturgeons

References

• Alba , M. 2001 . Replicative DNA polymerases . Genome Biology , 2 : 1 – 5 .
   Google Scholar
• Aoki , T. , Hirono , I. , Kurokawa , K. , Fukuda , H. , Nahary , R. , Eldar , A. , Davison , A. J. , Waltzek , T. B. , Bercovier , H. and Hedrick , R. P. 2007 . Genome sequences of three koi herpesvirus isolates representing the expanding distribution of an emerging disease threatening koi and common carp worldwide . Journal of Virology , 81 : 5058 – 5065 .
   PubMed Web of Science ®Google Scholar
• Birstein , V. J. 1993 . Sturgeon and paddlefishes: threatened fishes in need of conservation . Conservation Biology , 7 : 773 – 787 .
   Web of Science ®Google Scholar
• Birstein , V. J. and Bemis , W. E. 1997 . How many species are there within the genus Acipenser? . Environmental Biology of Fishes , 48 : 157 – 163 .
   Web of Science ®Google Scholar
• Davison , A. J. 1992 . Channel catfish virus: a new type of herpesvirus . Virology , 186 : 9 – 14 .
   PubMed Web of Science ®Google Scholar
• Davison , A. J. 2002 . Evolution of the herpesviruses . Veterinary Microbiology , 86 : 69 – 88 .
   PubMed Web of Science ®Google Scholar
• Davison , A. J. , Cunningham , C. , Sauerbier , W. and McKinnell , R. G. 2006 . Genome sequences of two frog herpesviruses . Journal of General Virology , 87 : 3509 – 3514 .
   PubMed Web of Science ®Google Scholar
• Davison , A. J. , Sauerbier , W. , Dolan , A. , Addison , C. and McKinnell , R. G. 1999 . Genomic studies of the Lucke tumor herpesvirus (RaHV-1) . Journal of Cancer Research and Clinical Oncology , 125 : 232 – 238 .
   PubMed Web of Science ®Google Scholar
• Felsenstein , J. 1985 . Confidence limits on phylogenies: an approach using the bootstrap . Evolution , 39 : 783 – 791 .
   PubMed Web of Science ®Google Scholar
• Hanson , L. A. , Rudis , M. R. , Vasquez-Lee , M. and Montgomery , R. D. 2006 . A broadly applicable method to characterize large DNA viruses and adenoviruses based on the DNA polymerase gene . Virology Journal , 11 : 28 – 38 .
   Web of Science ®Google Scholar
• Hedges , S. B. 1992 . The number of bootstrap replications needed for accurate estimation of the bootstrap P-value in phylogenetic studies . Molecular Biology and Evolution , 9 : 366 – 369 .
   PubMed Web of Science ®Google Scholar
• Hedrick , R. P. , Groff , J. M. and McDowell , T. S. 1991a . Isolation of an epitheliotropic herpesvirus from white sturgeon (Acipenser transmontanus) . Diseases of Aquatic Organisms , 11 : 49 – 56 .
   Web of Science ®Google Scholar
• Hedrick , R. P. , McDowell , T. S. , Rosemark , R. , Aronstein , D. and Lannan , C. N. 1991b . Two cell lines from white sturgeon (Acipenser transmontanus) . Transactions of the American Fisheries Society , 120 : 528 – 534 .
   Web of Science ®Google Scholar
• Hedrick , R. P. and Sano , T. 1989 . “ Viruses of lower vertebrates ” . In Herpesviruses of fishes Edited by: Ahne , W. and Kurstak , E. 161 – 170 . Berlin : Springer-Verlag .
   Google Scholar
• Jager , H. I. , Chandler , J. A. , Lepla , K. B. and Winkle , W. V. 2001 . A theoretical study of river fragmentation by dams and its effects on white sturgeon populations . Environmental Biology of Fishes , 60 : 347 – 361 .
   Web of Science ®Google Scholar
• Kelley , G. O. , Waltzek , T. B. , McDowell , T. S. , Yun , S. C. , LaPatra , S. E. and Hedrick , R. P. 2005 . Genetic relationships among herpes-like viruses isolated from sturgeon . Journal of Aquatic Animal Health , 17 : 297 – 303 .
   Web of Science ®Google Scholar
• Knopf , C. W. 1998 . Evolution of viral DNA-dependent DNA polymerases . Virus Genes , 16 : 47 – 58 .
   PubMed Web of Science ®Google Scholar
• Kumar , S. , Tamura , K. , Jakobsen , I. and Nei , M. 2001 . MEGA2: molecular evolutionary genetics analysis software . Bioinformatics , 17 : 1244 – 1245 .
   PubMed Web of Science ®Google Scholar
• Minson , A. C. , Davison , A. J. , Eberle , R. , Desrosiers , R. C. , Fleckenstein , B. , McGeoch , D. J. , Pellett , P. E. , Roizman , B. and Studdert , M. J. 2000 . “ Family Herpesviridae ” . In Virus taxonomy: classification and nomenclature of viruses: seventh report of the International Committee on Taxonomy of Viruses Edited by: van Regenmortel , M. H. V. , Fauquet , C. M. , Bishop , D. H. L. , Carstens , E. B. , Estes , M. K. , Lemon , S. M. , Maniloff , J. , Mayo , M. A. , McGeoch , D. J. , Pringle , C. R. and Wickner , R. B. 203 – 225 . San Diego, California : Academic Press .
   Google Scholar
• Schaffter , R. G. 1997 . White sturgeon spawning migrations and location of spawning habitat in the Sacramento River, California . California Fish and Game , 83 : 1 – 20 .
   Web of Science ®Google Scholar
• Thompson , J. D. , Higgins , D. G. and Gibson , T. J. 1994 . Clustal W: improving the sensitivity of progressive multiple-sequence alignment through sequence weighting, position-specific gap penalties, and weight matrix choice . Nucleic Acids Research , 22 : 4673 – 4680 .
   PubMed Web of Science ®Google Scholar
• Tsai , C. T. , Ting , J. W. , Wu , M. H. , Wu , M. F. , Guo , I. C. and Chang , C. Y. 2005 . Complete genome sequence of the grouper iridovirus and comparison of genomic organization with those of other iridoviruses . Journal of Virology , 79 : 2010 – 2023 .
   PubMed Web of Science ®Google Scholar
• Venkatesh , B. , Erdmann , M. V. and Brenner , S. 2001 . Molecular synapomorphies resolve evolutionary relationships of extant jawed vertebrates . Proceedings of the National Academy of Sciences of the USA , 98 : 11382 – 11387 .
   PubMed Web of Science ®Google Scholar
• Waltzek , T. B. , Kelley , G. O. , Stone , D. M. , Way , K. , Hanson , L. , Fukuda , H. , Hirono , I. , Aoki , T. , Davison , A. J. and Hedrick , R. P. 2005 . Koi herpesvirus represents a third cyprinid herpesvirus (CyHV-3) in the family Herpesviridae . Journal of General Virology , 86 : 1659 – 1667 .
   PubMed Web of Science ®Google Scholar
• Watson , L. R. , Yun , S. C. , Groff , J. M. and Hedrick , R. P. 1995 . Characteristics and pathogenicity of a novel herpesvirus isolated from adult and subadult white sturgeon Acipenser transmontanus . Diseases of Aquatic Organisms , 22 : 199 – 210 .
   Web of Science ®Google Scholar
• Wise , J. A. , Harrell , S. F. , Busch , R. L. and Boyle , J. A. 1988 . Vertical transmission of channel catfish virus . American Journal of Veterinary Research , 49 : 1506 – 1509 .
   PubMed Web of Science ®Google Scholar