Que sera, sera: evolution of the swine H1N1 influenza A virus

References

• Swine influenza A (H1N1) infection in two children – southern California, March–April 2009. MMWR58(15), 400–402 (2009).
   PubMedGoogle Scholar
• Clark T, Stephenson I. Influenza A/H1N1 in 2009: a pandemic in evolution. Expert Rev. Vaccines8(7), 819–822 (2009).
   PubMed Web of Science ®Google Scholar
• Conenello GM, Palese P. Influenza A virus PB1-F2: a small protein with a big punch. Cell Host Microbe2(4), 207–209 (2007).
   PubMedGoogle Scholar
• Wise HM, Foeglein A, Sun J et al. A complicated message: identification of a novel PB1-related protein translated from influenza A segment 2 mRNA. J. Virol.83(16), 8021–8031 (2009).
   PubMed Web of Science ®Google Scholar
• Zhirnov OP, Poyarkov SV, Vorob’eva IV, Safonova OA, Malyshev NA, Klenk HD. Segment NS of influenza A virus contains an additional gene NSP in positive-sense orientation. Dokl. Biochem. Biophys.414(1), 127–133 (2007).
   PubMedGoogle Scholar
• Garten RJ, Davis CT, Russell CA et al. Antigenic and genetic characteristics of swine-origin 2009 A(H1N1) influenza viruses circulating in humans. Science325(5937), 197–201 (2009).
   PubMed Web of Science ®Google Scholar
• Smith GJ, Vijaykrishna D, Bahl J et al. Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic. Nature459(7250), 1122–1125 (2009).
   PubMed Web of Science ®Google Scholar
• Dawood FS, Jain S, Finelli L et al. Emergence of a novel swine-origin influenza A (H1N1) virus in humans. N. Engl. J. Med.360(25), 2605–2615 (2009).
   PubMed Web of Science ®Google Scholar
• Myers KP, Olsen CW, Gray GC. Cases of swine influenza in humans: a review of the literature. Clin. Infect. Dis.44(8), 1084–1088 (2007).
   PubMed Web of Science ®Google Scholar
• Fraser C, Donnelly CA, Cauchemez S et al. Pandemic potential of a strain of influenza A (H1N1): early findings. Science324(5934), 1557–1561 (2009).
   PubMed Web of Science ®Google Scholar
• Stambas J, Guillonneau C, Kedzierska K, Mintern JD, Doherty PC, La Gruta NL. Killer T cells in influenza. Pharmacol. Ther.120(2), 186–196 (2008).
   PubMedGoogle Scholar
• Seo SH, Webster RG. Cross-reactive, cell-mediated immunity and protection of chickens from lethal H5N1 influenza virus infection in Hong Kong poultry markets. J. Virol.75(6), 2516–2525 (2001).
   PubMed Web of Science ®Google Scholar
• Yewdell JW, Frank E, Gerhard W. Expression of influenza A virus internal antigens on the surface of infected P815 cells. J. Immunol.126, 1814–1819 (1981).
   PubMed Web of Science ®Google Scholar
• Staerz UD, Yewdell JW, Bevan MJ. Hybrid antibody-mediated lysis of virus-infected cells. Eur. J. Immunol.17(4), 571–574 (1987).
   PubMed Web of Science ®Google Scholar
• Gerhard W, Mozdzanowska K, Zharikova D. Prospects for universal influenza virus vaccine. Emerg. Infect. Dis.12(4), 569–574 (2006).
   PubMed Web of Science ®Google Scholar
• Knossow M, Skehel JJ. Variation and infectivity neutralization in influenza. Immunology119(1), 1–7 (2006).
   PubMed Web of Science ®Google Scholar
• Ekiert DC, Bhabha G, Elsliger MA et al. Antibody recognition of a highly conserved influenza virus epitope. Science324(5924), 246–251 (2009).
   PubMed Web of Science ®Google Scholar
• Sui J, Hwang WC, Perez S et al. Structural and functional bases for broad-spectrum neutralization of avian and human influenza A viruses. Nat. Struct. Mol. Biol.16(3), 265–273 (2009).
   PubMed Web of Science ®Google Scholar
• Yewdell JW, Gerhard W. Antigenic characterization of viruses by monoclonal antibodies. Annu. Rev. Microbiol.35, 185–206 (1981).
   PubMedGoogle Scholar
• Gerhard W, Webster RG. Antigenic drift in influenza A viruses. I. Selection and characterization of antigenic variants of A/PR/8/34 (HON1) influenza virus with monoclonal antibodies. J. Exp. Med.148, 383–392 (1978).
   PubMed Web of Science ®Google Scholar
• Gerhard W, Yewdell J, Frankel ME, Webster R. Antigenic structure of influenza virus haemagglutinin defined by hybridoma antibodies. Nature290(5808), 713–717 (1981).
   PubMed Web of Science ®Google Scholar
• Caton AJ, Brownlee GG, Yewdell JW, Gerhard W. The antigenic structure of the influenza virus A/PR/8/34 hemagglutinin (H1 subtype). Cell31(2 Pt 1), 417–427 (1982).
   PubMed Web of Science ®Google Scholar
• Green N, Alexander H, Olson A et al. Immunogenic structure of the influenza-virus hemagglutinin. Cell28(3), 477–487 (1982).
   PubMed Web of Science ®Google Scholar
• Muller GM, Shapira M, Arnon R. Anti-influenza response achieved by immunization with a synthetic conjugate. Proc. Natl Acad. Sci. USA79(2), 569–573 (1982).
   PubMedGoogle Scholar
• Staudt LM, Gerhard W. Generation of antibody diversity in the immune response of BALB/c mice to influenza virus hemagglutinin. I. Significant variation in repertoire expression between individual mice. J. Exp. Med.157(2), 687–704 (1983).
   PubMedGoogle Scholar
• Yewdell JW, Webster RG, Gerhard WU. Antigenic variation in three distinct determinants of an influenza type A haemagglutinin molecule. Nature279(5710), 246–248 (1979).
   PubMedGoogle Scholar
• Wilson IA, Cox NJ. Structural basis of immune recognition of influenza virus hemagglutinin. Ann. Rev. Immunol.8, 737–771 (1990).
   PubMed Web of Science ®Google Scholar
• Wang ML, Skehel JJ, Wiley DC. Comparative analyses of the specificities of anti-influenza hemagglutinin antibodies in human sera. J. Virol.57(1), 124–128 (1986).
   PubMed Web of Science ®Google Scholar
• Yewdell JW, Caton AJ, Gerhard W. Selection of influenza A virus adsorptive mutants by growth in the presence of a mixture of monoclonal antihemagglutinin antibodies. J. Virol.57(2), 623–628 (1986).
   PubMed Web of Science ®Google Scholar
• Fazekasd S. Evolution and hierarchy of influenza viruses. Arch. Environ. Health21(3), 293–303 (1970).
   PubMedGoogle Scholar
• Smith DJ, Lapedes AS, de Jong JC et al. Mapping the antigenic and genetic evolution of influenza virus. Science305(5682), 371–376 (2004).
   PubMed Web of Science ®Google Scholar
• Nelson MI, Simonsen L, Viboud C et al. Stochastic processes are key determinants of short-term evolution in influenza a virus. PLoS Pathog.2(12), e125 (2006).
   PubMedGoogle Scholar
• Soundararajan V, Tharakaraman K, Raman R et al. Extrapolating from sequence – the 2009 H1N1 ‘swine’ influenza virus. Nat. Biotechnol.27(6), 510–513 (2009).
   PubMed Web of Science ®Google Scholar
• Kilbourne ED, Smith C, Brett I, Pokorny BA, Johansson B, Cox N. The total influenza vaccine failure of 1947 revisited: major intrasubtypic antigenic change can explain failure of vaccine in a post-World War II epidemic. Proc. Natl Acad. Sci. USA99(16), 10748–10752 (2002).
   PubMed Web of Science ®Google Scholar
• Yu X, Tsibane T, McGraw PA et al. Neutralizing antibodies derived from the B cells of 1918 influenza pandemic survivors. Nature455(7212), 532–536 (2008).
   PubMed Web of Science ®Google Scholar
• Raymond FL, Caton AJ, Cox NJ, Kendal AP, Brownlee GG. The antigenicity and evolution of influenza H1 haemagglutinin, from 1950–1957 and 1977–1983: two pathways from one gene. Virology148(2), 275–287 (1986).
   PubMed Web of Science ®Google Scholar
• Russell CA, Jones TC, Barr IG et al. The global circulation of seasonal influenza A (H3N2) viruses. Science320(5874), 340–346 (2008).
   PubMed Web of Science ®Google Scholar
• Van Hoeven N, Pappas C, Belser JA et al. Human HA and polymerase subunit PB2 proteins confer transmission of an avian influenza virus through the air. Proc. Natl Acad. Sci. USA106(9), 3366–3371 (2009).
   PubMed Web of Science ®Google Scholar
• Conenello GM, Zamarin D, Perrone LA, Tumpey T, Palese P. A single mutation in the PB1-F2 of H5N1 (HK/97) and 1918 influenza A viruses contributes to increased virulence. PLoS Pathog.3(10), 1414–1421 (2007).
   PubMed Web of Science ®Google Scholar
• Zamarin D, Ortigoza MB, Palese P. Influenza A virus PB1-F2 protein contributes to viral pathogenesis in mice. J. Virol.80(16), 7976–7983 (2006).
   PubMed Web of Science ®Google Scholar
• Steel J, Lowen AC, Mubareka S, Palese P. Transmission of influenza virus in a mammalian host is increased by PB2 amino acids 627K or 627E/701N. PLoS Pathog.5(1), e1000252 (2009).
   PubMed Web of Science ®Google Scholar