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Special Report

Helicase-dependent amplification: use in OnChip amplification and potential for point-of-care diagnostics

, &
Pages 645-650 | Published online: 09 Jan 2014

References

  • Zhang C, Xu J, Ma W, Zheng W. PCR microfluidic devices for DNA amplification. Biotechnol. Adv.24(3), 243–284 (2006).
  • Zhang C, Xing D. Miniaturized PCR chips for nucleic acid amplification and analysis: latest advances and future trends. Nucleic Acids Res.35(13), 4223–4237 (2007).
  • Andresen D, von Nickisch-Rosenegk M, Bier FF. Helicase-dependent OnChip-amplification and its use in multiplex pathogen detection. Clin. Chim. Acta403(1–2), 244–248 (2009).
  • Vincent M, Xu Y, Kong H. Helicase-dependent isothermal DNA amplification. EMBO Rep.5(8), 795–800 (2004).
  • An L, Tang W, Ranalli TA et al. Characterization of a thermostable UvrD helicase and its participation in helicase-dependent amplification. J. Biol. Chem.280(32), 28952–28958 (2005).
  • Goldmeyer J, Kong H, Tang W. Development of a novel one-tube isothermal reverse transcription thermophilic helicase-dependent amplification platform for rapid RNA detection. J. Mol. Diagn.9(5), 639–644 (2007).
  • Goldmeyer J, Li H, McCormac M et al. Identification of Staphylococcus aureus and determination of methicillin resistance directly from positive blood cultures by isothermal amplification and a disposable detection device. J. Clin. Microbiol.46(4), 1534–1536 (2008).
  • Tong Y, Tang W, Kim HJ et al. Development of isothermal TaqMan assays for detection of biothreat organisms. Biotechniques45(5), 543–557 (2008).
  • Motre A, Li Y, Kong H. Enhancing helicase-dependent amplification by fusing the helicase with the DNA polymerase. Gene420(1), 17–22 (2008).
  • Petrik J. Diagnostic applications of microarrays. Transfus. Med.16(4), 233–247 (2006).
  • Dufva M, Christensen C. Diagnostic and analytical applications of protein microarrays. Expert Rev. Proteomics2(1), 41–48 (2005).
  • Mikhailovich V, Gryadunov D, Kolchinsky A et al. DNA microarrays in the clinic: infectious diseases. Bioessays30(7), 673–682 (2008).
  • Uttamchandani M, Neo JL, Ong BN, Moochhala S. Applications of microarrays in pathogen detection and biodefence. Trends Biotechnol.27(1), 53–61 (2008).
  • Loy A, Bodrossy L. Highly parallel microbial diagnostics using oligonucleotide microarrays. Clin. Chim. Acta363(1–2), 106–119 (2006).
  • Bodrossy L, Sessitsch A. Oligonucleotide microarrays in microbial diagnostics. Curr. Opin. Microbiol.7(3), 245–254 (2004).
  • Zhang D, Wu J, Ye F et al. Amplification of circularizable probes for the detection of target nucleic acids and proteins. Clin. Chim. Acta.363(1–2), 61–70 (2006).
  • Nallur G, Luo C, Fang L et al. Signal amplification by rolling circle amplification on DNA microarrays. Nucleic Acid Res.29(23), E118 (2001).
  • Hatch A, Sano T, Misasi J, Smith CL. Rolling circle amplification of DNA immobilized on solid surfaces and its application to multiplex mutation detection. Genet. Anal.15(2), 35–40 (1999).
  • Westin L, Xu X, Miller C et al. Anchored multiplex amplification on a microelectronic chip array. Nat. Biotechnol.18(19), 99–204 (2000).
  • Adessi C, Matton G, Ayala G et al. Solid phase DNA amplification: characterisation of primer attachment and amplification mechanisms. Nucleic Acids Res.28(20), E87 (2000).
  • Mitterer G, Schmidt W. Microarray-based detection of bacteria by on-chip PCR. Methods Mol. Biol.34537–34551 (2006).
  • von Nickisch-Rosenegk M, Marschan X, Andresen D et al. On-chip PCR amplification of very long templates using immobilized primers on glassy surfaces. Biosens. Bioelectron.20(8), 1491–1498 (2005).
  • Mitterer G, Huber M, Leidinger E et al. Microarray-based identification of bacteria in clinical samples by solid-phase PCR amplification of 23S ribosomal DNA sequences. J. Clin. Microbiol.42(3), 1048–1057 (2004).
  • Huber M, Mündlein A, Dornstauder E et al. Accessing single nucleotide polymorphisms in genomic DNA by direct multiplex polymerase chain reaction amplification on oligonucleotide microarrays. Anal. Biochem.303(1), 25–33 (2002).
  • Huber M, Losert D, Hiller R et al. Detection of single base alterations in genomic DNA by solid phase polymerase chain reaction on oligonucleotide microarrays. Anal. Biochem.299(1), 24–30 (2001).
  • Tillib SV, Strizhkov BN, Mirzabekov AD. Integration of multiple PCR amplifications and DNA. Anal. Biochem.292(1), 155–160 (2001).
  • Khodakov DA, Zakharova NV, Gryadunov DA et al.In vitro transcription of a whole gene on a surface-coupled template. Lab. Chip5(6), 665–668 (2005).
  • Steffen J, Nickisch-Rosenegk MV, Bier F. In vitro transcription of a whole gene on a surface-coupled template. Lab. Chip5(6), 665–668 (2005).
  • Nickisch-Rosenegk MV, Marschan X, Andresen D, Bier F. Reverse transcription-polymerase chain reaction on a microarray: the integrating concept of “active arrays”. Anal. Bioanal. Chem.391(5), 1671–1678 (2008).
  • Bier FF, von Nickisch-Rosenegk M, Ehrentreich-Förster E et al. DNA microarrays. Adv. Biochem. Eng. Biotechnol.109, 433–453 (2008).
  • Frost & Sullivan. US Molecular Diagnostics Markets. Frost & Sullivan, TX, USA, F743–F755 (2006).
  • Frost & Sullivan. US Point-of-care Testing Markets. Frost & Sullivan, TX, USA, F744–F755 (2006).
  • Frost & Sullivan. European IVD Markets. Frost & Sullivan, TX, USA, H010–H055 (2006).
  • Frost & Sullivan. European POCT Markets. Frost & Sullivan, TX, USA, H012–H055 (2006).
  • Ehrentreich-Förster E, Andresen D. Marktpotenzial von point-of-care-testing/market potential of point-of-care testing. LaboratoriumsMedizin33(3), 153–157 (2009).

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