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Short Communication

Nontuberculous Mycobacteria – Clinical and Laboratory Diagnosis: Experiences from a TB Endemic Country

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Article: FSO612 | Received 13 Feb 2020, Accepted 26 May 2020, Published online: 30 Jul 2020

References

  • Taxonomy of mycobacteria. In: Mycobacteria. GoodfellowM, MageeJG ( Eds). Springer Link, Berlin, Germany, 1–71 (1998).
  • LPSNMycobacterium (2020). www.bacterio.net/mycobacterium.html
  • WolinskyE. Nontuberculous mycobacteria and associated diseases. Am. Rev. Respir. Dis.119(1), 107–159 (1979).
  • BensonCA. Disease due to the Mycobacterium avium complex in patients with AIDS: epidemiology and clinical syndrome. Clin. Infect. Dis.18(Suppl. 3), S218–S222 (1994).
  • FalkinhamJO. Epidemiology of infection by nontuberculous mycobacteria. Clin. Microbiol. Rev.9(2), 177–215 (1996).
  • HaworthCS , BanksJ , CapstickTet al.British Thoracic Society guidelines for the management of Nontuberculous mycobacterial pulmonary disease (NTM-PD). Thorax72(Suppl. 2), ii1–ii64 (2017).
  • bioMerieux. VITEK® MS Mass Spectrometry Microbial Identification System. Mass spectrometry microbial identification system (2020). www.biomerieux-diagnostics.com/vitekr-ms-0
  • LuoL , CaoW , ChenWet al.Evaluation of the VITEK MS knowledge base version 3.0 for the identification of clinically relevant Mycobacterium species. Emerg. Microbes Infect.7(1), 114 (2018).
  • Mediavilla-GradolphMC , DeToro-Peinado I , Bermúdez-RuizMPet al.Use of MALDI-TOF MS for identification of nontuberculous mycobacterium species isolated from clinical specimens. BioMed Res.2015, e854078 (2015).
  • LeyerC , GregorowiczG , MougariF , RaskineL , CambauE , de BrielD. Comparison of Saramis 4.12 and IVD 3.0 Vitek MS matrix-assisted laser desorption ionization–time of flight mass spectrometry for identification of mycobacteria from solid and liquid culture media. J. Clin. Microbiol.55(7), 2045–2054 (2017).
  • Bruker Daltonics. Overview Mycobacteria Identification (2020). www.bruker.com/products/mass-spectrometry-and-separations/ivd-ce-certified-maldi-biotyper/mycobacteria-identification/overview-mycobacteria-identification.html
  • TortoliE. Impact of genotypic studies on mycobacterial taxonomy: the new mycobacteria of the 1990s. Clin. Microbiol. Rev.16(2), 319–354 (2003).
  • JoaoI , CristovaoP , AntunesL , NunesB , JordaoL. Identification of nontuberculous mycobacteria by partial gene sequencing and public databases. Int. J. Mycobacteriol.3(2), 144–151 (2014).
  • SlanyM , PavlikI. Molecular detection of nontuberculous mycobacteria: advantages and limits of a broad-range sequencing approach. J. Mol. Microbiol. Biotechnol.22(4), 268–276 (2012).
  • RothA , FischerM , HamidME , MichalkeS , LudwigW , MauchH. Differentiation of phylogenetically related slowly growing mycobacteria based on 16S-23S rRNA gene internal transcribed spacer sequences. J. Clin. Microbiol.36(1), 139–147 (1998).
  • GriffithDE , AksamitT , Brown-ElliottBAet al.An official ATS/IDSA statement: diagnosis, treatment, and prevention of nontuberculous mycobacterial diseases. Am. J. Respir. Crit. Care Med.175(4), 367–416 (2007).
  • HenkleE , HedbergK , SchaferSD , WinthropKL. Surveillance of extrapulmonary nontuberculous mycobacteria infections, Oregon, USA, 2007–2012. 23(10), 1627–1630 (2017).
  • Kham-NgamI , ChetchotisakdP , AnantaPet al.Epidemiology of and risk factors for extrapulmonary nontuberculous mycobacterial infections in Northeast Thailand. PeerJ.6, e5479 (2018).
  • U.S Food and Drug Administration. 510(k) substantial equivalence determination decision summary (2017). www.accessdata.fda.gov/cdrh_docs/reviews/K162950.pdf
  • TurnerS , PryerKM , MiaoVP , PalmerJD. Investigating deep phylogenetic relationships among cyanobacteria and plastids by small subunit rRNA sequence analysis. J. Eukaryot. Microbiol.46(4), 327–338 (1999).
  • YuX , LuL , ChenGet al.Identification and characterization of Nontuberculous mycobacteria isolated from tuberculosis suspects in Southern-central China. PloS ONE9(12), e114353 (2014).
  • JesudasonMV , GladstoneP. Non tuberculous mycobacteria isolated from clinical specimens at a tertiary care hospital in South India. Indian J. Med. Microbiol.23(3), 172–175 (2005).
  • ParkSC , KangMJ , HanCHet al.Prevalence, incidence, and mortality of nontuberculous mycobacterial infection in Korea: a nationwide population-based study. BMC Pulm. Med.19(1), 140 (2019).
  • NarangR , NarangP , MendirattaDK. Isolation and identification of nontuberculous mycobacteria from water and soil in central India. Indian J. Med. Microbiol.27(3), 247 (2009).
  • FalkinhamJO. Environmental sources of nontuberculous mycobacteria. Clin. Chest Med.36(1), 35–41 (2015).
  • JoshiSC , DiwanV , JoshiRet al.“How can the patients remain safe, if we are not safe and protected from the infections”? a qualitative exploration among health-care workers about challenges of maintaining hospital cleanliness in a resource limited tertiary setting in rural India. Int. J. Environ. Res. Public. Health.15(9), 1942 (2018).
  • BrodeSK , DaleyCL , MarrasTK. The epidemiologic relationship between tuberculosis and Nontuberculous mycobacterial disease: a systematic review. Int. J. Tuberc. Lung Dis. Off. J. Int. Union Tuberc. Lung Dis.18(11), 1370–1377 (2014).
  • VarleyCD , KuJH , HenkleE , SchaferSD , WinthropKL. Disseminated nontuberculous mycobacteria in HIV-infected patients, Oregon, USA, 2007–2012. Emerg. Infect. Dis.23(3), 533–535 (2017).
  • DharK , ShenoyVP , VishwanathS , PrabhuM. Disseminated Mycobacterium avium intracellulare complex (MAC) disease in a retropositive patient caused by noncompliance of HAART. Ann. Trop. Med. Public Health.9(3), 194 (2016).
  • DingLW , LaiCC , LeeLN , HsuehPR. Disease caused by nontuberculous mycobacteria in a university hospital in Taiwan, 1997–2003. Epidemiol. Infect.134(5), 1060–1067 (2006).
  • SnydmanDR , Redelman-SidiG , SepkowitzKA. Rapidly growing mycobacteria infection in patients with cancer. Clin. Infect. Dis.51(4), 422–434 (2010).
  • HoefslootW , van IngenJ , AndrejakCet al.The geographic diversity of nontuberculous mycobacteria isolated from pulmonary samples: an NTM-NET collaborative study. Eur. Respir. J.42(6), 1604–1613 (2013).
  • UmraoJ , SinghD , ZiaAet al.Prevalence and species spectrum of both pulmonary and extrapulmonary nontuberculous mycobacteria isolates at a tertiary care center. Int. J. Mycobacteriol.5(3), 288–293 (2016).
  • MM18: DNA Target Sequencing & Bacteria & Fungi ID. In: Interpretive Criteria for Identification of Bacteria and Fungi by Targeted DNA Sequencing2nd EditionClinical Laboratory Standards Institute, PA, USA (2018).
  • ThegerströmJ , JönssonB , BrudinLet al.Mycobacterium avium Subsp. avium and Subsp. hominissuis give different cytokine responses after in vitro stimulation of human blood mononuclear cells. PLoS One7(4), e34391 (2012).
  • Brown-ElliottBA , FritscheTR , OlsonBJet al.Comparison of two commercial matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS) systems for identification of nontuberculous mycobacteria. Am. J. Clin. Pathol.152(4), 527–536 (2019).
  • BuckwalterSP , OlsonSL , ConnellyBJet al.Evaluation of matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of mycobacterium species, nocardia species, and other aerobic actinomycetes. J. Clin. Microbiol.54(2), 376–384 (2016).
  • US FDACommunication with bioMerieux, inc. (2018). www.accessdata.fda.gov/cdrh_docs/pdf18/K181412.pdf
  • JorgensenJH , PfallerMA , CarrollKC. Manual of Clinical Microbiology.ASM Press, Washington DC, USA (2015).