89
Views
5
CrossRef citations to date
0
Altmetric
Original Research

Inferences on the biochemical and environmental regulation of universal stress proteins from Schistosomiasis parasites

, , &
Pages 15-27 | Published online: 10 May 2013

References

  • NahumLAMourãoMMOliveiraGNew frontiers in Schistosomagenomics and transcriptomicsJ Parasitol Res Epub November 21, 2012
  • BorchMKiernanMRustKSchistosomiasis: a case studyUrol Nurs2009291262919331272
  • van der WerfMJde VlasSJBrookerSQuantification of clinical morbidity associated with schistosome infection in sub-Saharan AfricaActa Trop2003862–312513912745133
  • HanZGBrindleyPJWangSYChenZSchistosoma genomics: new perspectives on schistosome biology and host-parasite interactionAnnu Rev Genomics Hum Genet20091021124019630560
  • DoenhoffMHaganPCioliDPraziquantel: its use in control of schistosomiasis in sub-Saharan Africa and current research needsParasitology2009136131825183519281637
  • MelmanSDSteinauerMLCunninghamCReduced susceptibility to praziquantel among naturally occurring Kenyan isolates of Schistosoma mansoniPLoS Negl Trop Dis200938e50419688043
  • BerrimanMHaasBJLoVerdePTThe genome of the blood fluke Schistosoma mansoniNature2009460725335235819606141
  • Schistosoma japonicum Genome Sequencing and Functional Analysis ConsortiumThe Schistosoma japonicum genome reveals features of host-parasite interplayNature2009460725334535119606140
  • YoungNDJexARLiBWhole-genome sequence of Schistosoma haematobiumNat Genet201244222122522246508
  • GobertGNMcManusDPNawaratnaSMoertelLMulvennaJJonesMKTissue specific profiling of females of Schistosoma japonicum by integrated laser microdissection microscopy and microarray analysisPLoS Negl Trop Dis200936e46919564906
  • GobertGNMoertelLBrindleyPJMcManusDPDevelopmental gene expression profiles of the human pathogen Schistosoma japonicumBMC Genomics20091012819320991
  • IsokpehiRDMahmudOMbahANDevelopmental regulation of genes encoding universal stress proteins in Schistosoma mansoniGene Regul Syst Bio201156174
  • AragonADImaniRABlackburnVRCunninghamCMicroarray based analysis of temperature and oxidative stress induced messenger RNA in Schistosoma mansoniMol Biochem Parasitol2008162213414118775750
  • MoertelLMcManusDPPivaTJYoungLMcInnesRLGobertGNOligonucleotide microarray analysis of strain- and gender-associated gene expression in the human blood fluke, Schistosoma japonicumMol Cell Probes200620528028916647836
  • WilliamsDLSayedAABernierJProfiling Schistosoma mansoni development using serial analysis of gene expression (SAGE)Exp Parasitol2007117324625817577588
  • LiuFChenPCuiSJWangZQHanZGSjTPdb: integrated transcriptome and proteome database and analysis platform for Schistosoma japonicumBMC Genomics2008930418578888
  • ProtasioAVTsaiIJBabbageAA systematically improved high quality genome and transcriptome of the human blood fluke Schistosoma mansoniPLoS Negl Trop Dis201261e145522253936
  • TaftASVermeireJJBernierJTranscriptome analysis of Schistosoma mansoni larval development using serial analysis of gene expression (SAGE)Parasitology2009136546948519265565
  • GobertGNMcInnesRMoertelLTranscriptomics tool for the human Schistosoma blood flukes using microarray gene expression profilingExp Parasitol2006114316017216631746
  • NachinLNannmarkUNyströmTDifferential roles of the universal stress proteins of Escherichia coli in oxidative stress resistance, adhesion, and motilityJ Bacteriol2005187186265627216159758
  • Hingley-WilsonSMLougheedKEFergusonKLeivaSWilliamsHDIndividual Mycobacterium tuberculosis universal stress protein homologues are dispensable in vitroTuberculosis (Edinb)201090423624420541977
  • RaghavanNMillerANGardnerMComparative gene analysis of Biomphalaria glabrata hemocytes pre-and post-exposure to miracidia of Schistosoma mansoniMol Biochem Parasitol2003126218119112615317
  • Negrão-CorrêaDMattosACPereiraCAMartins-SouzaRLCoelhoPMInteraction of Schistosoma mansoniSporocysts and Hemocytes of BiomphalariaJ Parasitol Res Epub June 28, 2012
  • OswaldIPEltoumIWynnTAEndothelial cells are activated by cytokine treatment to kill an intravascular parasite, Schistosoma mansoni, through the production of nitric oxideProc Natl Acad Sci U S A199491399910037508126
  • LoverdePTDo antioxidants play a role in schistosome host-parasite interactions?Parasitology Today199814728428917040785
  • SomeroGNProteins and temperatureAnnu Rev Physiol19955743687778874
  • IsokpehiRDSimmonsSSCohlyHHEkunweSIBegoniaGBAyensuWKIdentification of drought-responsive universal stress proteins in viridiplantaeBioinform Biol Insights20115415821423406
  • KimHGooEKangYKimJHwangIRegulation of universal stress protein genes by quorum sensing and RpoS in Burkholderia glumaeJ Bacteriol2012194598299222178971
  • PinedaMCTuronXLópez-LegentilSStress levels over time in the introduced ascidian Styela plicata: the effects of temperature and salinity variations on hsp70 gene expressionCell Stress Chaperones201217443544422249790
  • WangHLeiZLiXOettingRDRapid cold hardening and expression of heat shock protein genes in the B-biotype Bemisia tabaciEnviron Entomol201140113213922182622
  • ZhangYYYangJYinXXYangSPZhuYGArsenate toxicity and stress responses in the freshwater ciliate Tetrahymena pyriformisEur J Protistol201248322723622342134
  • FlorczykMAMcCueLAStackRFHauerCRMcDonoughKAIdentification and characterization of mycobacterial proteins differentially expressed under standing and shaking culture conditions, including Rv2623 from a novel class of putative ATP-binding proteinsInfect Immun20016995777578511500455
  • ZarembinskiTIHungLWMueller-DieckmannHJStructure-based assignment of the biochemical function of a hypothetical protein: a test case of structural genomicsProc Natl Acad Sci U S A1998952615189151939860944
  • FreestonePNyströmTTrineiMNorrisVThe universal stress protein, UspA, of Escherichia coli is phosphorylated in response to stasisJ Mol Biol199727433183249405142
  • FreestonePTrineiMClarkeSCNyströmTNorrisVTyrosine phosphorylation in Escherichia coliJ Mol Biol19982795104510519642082
  • LiuWTKaravolosMHBulmerDMRole of the universal stress protein UspA of Salmonella in growth arrest, stress and virulenceMicrob Pathog200742121017081727
  • RaspoetRGantoisIDevlooRSalmonella enteritidis universal stress protein (usp) gene expression is stimulated by egg white and supports oviduct colonization and egg contamination in laying hensVet Microbiol20111531–218619021715109
  • Seifart GomesCIzarBPazanFUniversal stress proteins are important for oxidative and acid stress resistance and growth of Listeria monocytogenes EGD-e in vitro and in vivoPLoS One201169e2496521980369
  • Salvador-RecatalàVGreenbergRMCalcium channels of schistosomes: unresolved questions and unexpected answersWiley Interdiscip Rev Membr Transp Signal201211859322347719
  • GreenbergRMAre Ca2+ channels targets of praziquantel action?Int J Parasitol20053511915619510
  • ColesGCThe effect of praziquantel on Schistosoma mansoniJ Helminthol19795313133458128
  • ChabotCDemystifying visual analyticsIEEE Comput Graph Appl2009292848719462638
  • ChangRZiemkiewiczCGreenTMRibarskyWDefining insight for visual analyticsIEEE Comput Graph Appl2009292141719462629
  • JohnsonMOCohlyHHIsokpehiRDAwofoluORThe case for visual analytics of arsenic concentrations in foodsInt J Environ Res Public Health2010751970198320623005
  • MackinlayJDHanrahanPStolteCShow me: automatic presentation for visual analysisIEEE Trans Vis Comput Graph20071361137114417968057
  • ThomasJJCookKAA visual analytics agendaIEEE Comput Graph Appl2006261101316463473
  • UniProt ConsortiumOngoing and future developments at the Universal Protein ResourceNucleic Acids Res201139D214D21921051339
  • Hertz-FowlerCPeacockCSWoodVGeneDB: a resource for prokaryotic and eukaryotic organismsNucleic Acids Res200432D339D34314681429
  • ZerlotiniAHeigesMWangHSchistoDB: a Schistosoma mansoni genome resourceNucleic Acids Res200937D579D58218842636
  • Marchler-BauerALuSAndersonJBCDD: a Conserved Domain Database for the functional annotation of proteinsNucleic Acids Res201139D225D22921109532
  • SalsburyFRJrKnutsonSTPooleLBFetrowJSFunctional site profiling and electrostatic analysis of cysteines modifiable to cysteine sulfenic acidProtein Sci200817229931218227433
  • WassMNKelleyLASternbergMJ3DLigand Site: predicting ligand-binding sites using similar structuresNucleic Acids Res201038W469W47320513649
  • BlomNSicheritz-PonténTGuptaRGammeltoftSBrunakSPrediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequenceProteomics2004461633164915174133
  • ChouKCShenHBA new method for predicting the subcellular localization of eukaryotic proteins with both single and multiple sites: Euk-mPLoc 2.0PLoS One201054e993120368981
  • LiuFLuJHuWWangSYNew perspectives on host-parasite interplay by comparative transcriptomic and proteomic analyses of Schistosoma japonicumPLoS Pathogens200624e2916617374
  • LarkinMBlackshieldsGBrownNPClustal W and Clustal X version 2.0Bioinformatics200723212947294817846036
  • TamuraKNeiMEstimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzeesMol Biol Evol19931035125268336541
  • JonesDTTaylorWRThortonJMThe rapid generation of mutation data matrices from protein sequencesComput Appl Biosci1992832752821633570
  • TamuraKPetersonDPetersonNStecherGNeiMKumarSMEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methodsMol Biol Evol201128102731273921546353
  • FelsensteinJConfidence limits on phylogenies: an approach using the bootstrapEvolution1985394783791
  • SteelMLockhartPJPennyDA frequency-dependent significance test for parsimonyMol Phylogenet Evol19954164717620636
  • JollyERChinCSMillerSGene expression patterns during adaptation of a helminth parasite to different environmental nichesGenome Biol200784R6517456242
  • SilvaLLMarcet-HoubenMNahumLAZerlotiniAGabaldónTOliveiraGThe Schistosoma mansoni phylome: using evolutionary genomics to gain insight into a parasite’s biologyBMC Genomics20121361723148687
  • LuCHLinYFLinJJYuCSPrediction of metal ion-binding sites in proteins using the fragment transformation methodPLoS One201276e3925222723976
  • FreestonePNyströmTTrineiMNorrisVThe universal stress protein, UspA, of Escherichia coli is phosphorylated in response to stasisJ Mol Biol199727433183249405142
  • BuchachenkoALKouznetsovDAArkhangelskySEOrlovaMAMarkarianAASpin biochemistry: magnetic 24 Mg-25 Mg-26 Mg isotope effect in mitochondrial ADP phosphorylationCell Biochem Biophys200543224325116049349
  • BuchachenkoALKouznetsovDABreslavskayaNNOrlovaMAMagnesium isotope effects in enzymatic phosphorylationJ Phys Chem B200811282548255618247604
  • LuoRZhouCLinJYangDShiYChengGIdentification of in vivo protein phosphorylation sites in human pathogen Schistosoma japonicum by a phosphoproteomic approachJ Proteomics201275386887722036931
  • NeblTPrietoJHKappEQuantitative in vivo analyses reveal calcium-dependent phosphorylation sites and identifies a novel component of the Toxoplasma invasion motor complexPLoS Pathog201179e100222221980283
  • SzaboALangerTSchröderHFlanaganJBukauBHartlFUThe ATP hydrolysis-dependent reaction cycle of the Escherichia coli Hsp70 system DnaK, DnaJ, and GrpEProc Natl Acad Sci U S A1994912210345103497937953
  • LangerTLuCEcholsHFlanaganJHayerMKHartlFUSuccessive action of DnaK, DnaJ and GroEL along the pathway of chaperone-mediated protein foldingNature199235663716836891349157
  • Soares de MouraRRozentalRClaudio-da-SilvaTSSchistosoma mansoni: effects of bromolysergic acid diethylamide, verapamil, and Ca2+-free solution on the motor activity of the isolated male worm induced by electrical stimulation and oxamniquineExp Parasitol19876321731792883021
  • KatsumataTKohnoSYamaguchiKHaraKAokiYHatching of Schistosoma mansoni eggs is a Ca2+/calmodulin-dependent processParasitol Res198976190912622901
  • KatsumataTShimadaMSatoKAokiYPossible involvement of calcium ions in the hatching of Schistosoma mansoni eggs in waterJ Parasitol1988746104010412461448
  • CunhaVNoëlFA Mg2+-independent Ca2+-stimulated ATPase activity in the tegument of Schistosoma mansoniBraz J Med Biol Res19882134494512976283
  • KawamotoFShozawaAKumadaNKojimaKPossible roles of cAMP and Ca2+ in the regulation of miracidial transformation in Schistosoma mansoniParasitol Res19897553683742542928
  • BlairKLBennettJLPaxRASchistosoma mansoni: evidence for protein kinase-C-like modulation of muscle activityExp Parasitol19886622432523165068
  • MatsumuraKMitsuiYSatoKSakamotoMAokiYSchistosoma mansoni: possible involvement of protein kinase C in linoleic acid-induced proteolytic enzyme release from cercariaeExp Parasitol19917233113202015870
  • DoenhoffMJCioliDUtzingerJPraziquantel: mechanisms of action, resistance and new derivatives for schistosomiasisCurr Opin Infect Dis200821665966718978535
  • GreenbergRMCa2+ signalling, voltage-gated Ca2+ channels and praziquantel in flatworm neuromusculatureParasitology2005131 SupplS97S10816569296
  • Pica-MattocciaLOrsiniTBassoASchistosoma mansoni: lack of correlation between praziquantel-induced intra-worm calcium influx and parasite deathExp Parasitol2008119333233518456260
  • AragonADImaniRABlackburnVRTowards an understanding of the mechanism of action of praziquantelMol Biochem Parasitol20091641576519100294