Quantification of Intestinal Lactobacillus Species in Children with Functional Constipation by Quantitative Real-Time PCR

References

• Koppen IJ, Lammers LA, Benninga MA, Tabbers MM. Management of functional constipation in children: therapy in practice. Pediatr Drugs. 2015;17(5):349–360. doi:10.1007/s40272-015-0142-4
   PubMed Web of Science ®Google Scholar
• Tabbers MM, DiLorenzo C, Berger MY, et al. Evaluation and treatment of functional constipation in infants and children: evidence-based recommendations from ESPGHAN and NASPGHAN. J Pediatr Gastroenterol Nutr. 2014;58(2):258–274. doi:10.1097/MPG.0000000000000266
   PubMed Web of Science ®Google Scholar
• Wojtyniak K, Szajewska H. Systematic review: probiotics for functional constipation in children. Eur J Pediatr. 2017;176(9):1155–1162. doi:10.1007/s00431-017-2972-2
   PubMed Web of Science ®Google Scholar
• Kim SE, Choi SC, Park KS, et al. Change of fecal flora and effectiveness of the short-term VSL# 3 probiotic treatment in patients with functional constipation. J Neurogastroenterol Motil. 2015;21(1):111. doi:10.5056/jnm14048
   Web of Science ®Google Scholar
• Dimidi E, Christodoulides S, Scott SM, Whelan K. Mechanisms of action of probiotics and the gastrointestinal microbiota on gut motility and constipation. Adv Nutr. 2017;8(3):484–494. doi:10.3945/an.116.014407
   PubMed Web of Science ®Google Scholar
• Ohkusa T, Koido S, Nishikawa Y, Sato N. Gut microbiota and chronic constipation: a review and update. Front Med. 2019;6. doi:10.3389/fmed.2019.00019
   Web of Science ®Google Scholar
• Bottari B, Felis GE, Salvetti E, et al. Effective identification of Lactobacillus casei group species: genome-based selection of the gene mutL as the target of a novel multiplex PCR assay. Microbiol. 2017;163(7):950–960. doi:10.1099/mic.0.000497
   Web of Science ®Google Scholar
• Huang C-H, Huang L. Rapid species-and subspecies-specific level classification and identification of Lactobacillus casei group members using MALDI Biotyper combined with ClinProTools. J Dairy Sci. 2018;101(2):979–991. doi:10.3168/jds.2017-13642
   Web of Science ®Google Scholar
• Yu J, Wang HM, Zha MS, et al. Molecular identification and quantification of lactic acid bacteria in traditional fermented dairy foods of Russia. J Dairy Sci. 2015;98(8):5143–5154. doi:10.3168/jds.2015-9460
   Web of Science ®Google Scholar
• Song Y-L, Kato N, Liu C-X, Matsumiya Y, Kato H, Watanabe K. Rapid identification of 11 human intestinal Lactobacillus species by multiplex PCR assays using group-and species-specific primers derived from the 16S–23S rRNA intergenic spacer region and its flanking 23S rRNA. FEMS Microbiol Lett. 2000;187(2):167–173. doi:10.1111/j.1574-6968.2000.tb09155.x
   Web of Science ®Google Scholar
• Garg KB, Ganguli I, Das R, Talwar G. Spectrum of Lactobacillus species present in healthy vagina of Indian women. Indian J Med Res. 2009;129(6):652.
   PubMed Web of Science ®Google Scholar
• Lyons SR, Griffen AL, Leys EJ. Quantitative real-time PCR for Porphyromonas gingivalis and total bacteria. J Clin Microbiol. 2000;38(6):2362–2365. doi:10.1128/JCM.38.6.2362-2365.2000
   PubMed Web of Science ®Google Scholar
• Junick J, Blaut M. Quantification of human fecal bifidobacterium species by use of quantitative real-time PCR analysis targeting the groEL gene. Appl Environ Microbiol. 2012;78(8):2613–2622. doi:10.1128/AEM.07749-11
   PubMed Web of Science ®Google Scholar
• Heeney DD, Gareau MG, Marco ML. Intestinal Lactobacillus in health and disease, a driver or just along for the ride? Curr Opin Biotechnol. 2018;49:140–147. doi:10.1016/j.copbio.2017.08.004
   PubMed Web of Science ®Google Scholar
• Rossi M, Martínez‐Martínez D, Amaretti A, Ulrici A, Raimondi S, Moya A. Mining metagenomic whole genome sequences revealed subdominant but constant Lactobacillus population in the human gut microbiota. Environ Microbiol Rep. 2016;8(3):399–406. doi:10.1111/1758-2229.12405
   Web of Science ®Google Scholar
• Mitsuoka T. The human gastrointestinal tract. In: The Lactic Acid Bacteria. Vol. 1. Boston, MA: Springer; 1992:69–114.
   Google Scholar
• Mikelsaar M, Annuk H, Shchepetova J, Mändar R, Sepp E, Björkstén B. Intestinal lactobacilli of Estonian and Swedish children. Microb Ecol Health Dis. 2002;14(2):75–80.
   Google Scholar
• Ahrné S, Lönnermark E, Wold AE, et al. Lactobacilli in the intestinal microbiota of Swedish infants. Microbes Infect. 2005;7(11–12):1256–1262. doi:10.1016/j.micinf.2005.04.011
   Web of Science ®Google Scholar
• Yang YG, Song MK, Park SJ, Kim SW. Direct detection of Shigella flexneri and Salmonella typhimurium in human feces by real-time PCR. J Microbiol Biotechnol. 2007;17(10):1616–1621.
   Web of Science ®Google Scholar
• Štšepetova J, Sepp E, Kolk H, Loivukene K, Songisepp E, Mikelsaar M. Diversity and metabolic impact of intestinal Lactobacillus species in healthy adults and the elderly. Br J Nutr. 2011;105(8):1235–1244. doi:10.1017/S0007114510004770
   PubMed Web of Science ®Google Scholar
• Zoppi G, Cinquetti M, Luciano A, Benini A, Muner A, Minelli EB. The intestinal ecosystem in chronic functional constipation. Acta Paediatr. 1998;87(8):836–841. doi:10.1111/j.1651-2227.1998.tb01547.x
   Web of Science ®Google Scholar
• Moraes J, Motta M, Beltrão M, Salviano TL, Silva G. Fecal microbiota and diet of children with chronic constipation. Int J Pediatr. 2016;2016:1–8. doi:10.1155/2016/6787269
   Google Scholar
• Zhu L, Liu W, Alkhouri R, et al. Structural changes in the gut microbiome of constipated patients. Physiol Genomics. 2014;46(18):679–686. doi:10.1152/physiolgenomics.00082.2014
   PubMed Web of Science ®Google Scholar
• Wu ZW, Lu HF, Wu J, et al. Assessment of the fecal lactobacilli population in patients with hepatitis B virus-related decompensated cirrhosis and hepatitis B cirrhosis treated with liver transplant. Microb Ecol. 2012;63(4):929–937. doi:10.1007/s00248-011-9945-1
   Web of Science ®Google Scholar
• Ahlroos T, Tynkkynen S. Quantitative strain‐specific detection of Lactobacillus rhamnosus GG in human faecal samples by real‐time PCR. J Appl Microbiol. 2009;106(2):506–514. doi:10.1111/j.1365-2672.2008.04018.x
   PubMed Web of Science ®Google Scholar
• Costa GN, Marcelino-Guimarães FC, Vilas-Bôas GT, Matsuo T, Miglioranza LH. Potential fate of ingested Lactobacillus plantarum and its occurrence in human feces. Appl Environ Microbiol. 2014;80(3):1013–1019. doi:10.1128/AEM.02588-13
   PubMed Web of Science ®Google Scholar