Serotype Distribution and Antibiotic Susceptibility of Streptococcus pneumoniae Isolates in Tehran, Iran: A Surveillance Study

References

• Weiser JN, Ferreira DM, Paton JC. Streptococcus pneumoniae: transmission, colonization and invasion. Nat Rev Microbiol. 2018;16(6):355–367. doi:10.1038/s41579-018-0001-829599457
   PubMed Web of Science ®Google Scholar
• Daniel P, Rodrigo C, Bewick T, et al. 13-Valent vaccine serotype pneumococcal community acquired pneumonia in adults in high clinical risk groups. Vaccine. 2018;36(12):1614–1620. doi:10.1016/j.vaccine.2018.02.00529439865
   PubMed Web of Science ®Google Scholar
• Wahl B, O’Brien KL, Greenbaum A, et al. Burden of Streptococcus pneumoniae and Haemophilus influenzae type b disease in children in the era of conjugate vaccines: global, regional, and national estimates for 2000–2015. Lancet Glob Health. 2018;6(7):e744–e757. doi:10.1016/S2214-109X(18)30247-X29903376
   PubMed Web of Science ®Google Scholar
• Jauneikaite E, Tocheva AS, Jefferies JM, et al. Current methods for capsular typing of Streptococcus pneumoniae. J Microbiol Methods. 2015;113:41–49. doi:10.1016/j.mimet.2015.03.00625819558
   PubMed Web of Science ®Google Scholar
• Warren JL, Pingali SC, Weinberger DM. Spatial variability in the persistence of pneumococcal conjugate vaccine-targeted pneumococcal serotypes among adults. Epidemiology. 2017;28(1):119–126. doi:10.1097/EDE.000000000000055127541841
   PubMed Web of Science ®Google Scholar
• Shi W, Zhou K, Yuan L, et al. Serotype distribution, antibiotic resistance patterns and molecular characteristics of serogroup 6 Streptococcus pneumoniae isolates collected from Chinese children before the introduction of PCV13. J Glob Antimicrob Resist. 2018;14:23–28. doi:10.1016/j.jgar.2017.12.00729274470
   PubMed Web of Science ®Google Scholar
• Mauffrey F, Fournier E, Demczuk W, et al. Comparison of sequential multiplex PCR, sequetyping and whole genome sequencing for serotyping of Streptococcus pneumoniae. PLoS One. 2017;12(12):e0189163. doi:10.1371/journal.pone.018916329236737
   PubMed Web of Science ®Google Scholar
• El Moujaber G, Osman M, Rafei R, Dabboussi F, Hamze M. Molecular mechanisms and epidemiology of resistance in Streptococcus pneumoniae in the Middle East region. J Med Microbiol. 2017;66(7):847–858. doi:10.1099/jmm.0.00050328650313
   PubMed Web of Science ®Google Scholar
• Talebi M, Azadegan A, Sadeghi J, et al. Determination of characteristics of erythromycin resistant Streptococcus pneumoniae with preferred PCV usage in Iran. PLoS One. 2016;11(12):e0167803. doi:10.1371/journal.pone.016780328033345
   PubMed Web of Science ®Google Scholar
• Centers for Disease Control and Prevention (CDC). Drug resistance; 2017 Available from: www.cdc.gov/pneumococcal/drug-resistance.html. Accessed 319, 2019.
   Google Scholar
• Setchanova L, Alexandrova A, Pencheva D, et al. Rise of multidrug-resistant Streptococcus pneumoniae clones expressing non-vaccine serotypes among children following introduction of the 10-valent pneumococcal conjugate vaccine in Bulgaria. J Glob Antimicrob Resist. 2018;15:6–11. doi:10.1016/j.jgar.2018.05.01229803821
   PubMed Web of Science ®Google Scholar
• Houri H, Tabatabaei SR, Saee Y, Fallah F, Rahbar M, Karimi A. Distribution of capsular types and drug resistance patterns of invasive pediatric Streptococcus pneumoniae isolates in Tehran, Iran. Nt J Infect Dis. 2017;57:21–26.
   Web of Science ®Google Scholar
• Ahmadi A, Yaghoubi S, Irajian G. Molecular analysis of PBP1A in Streptococcus pneumoniae isolated from clinical and normal flora samples in Tehran, Iran: a multicenter study. Microb Drug Resist. 2019;25(1):39–46. doi:10.1089/mdr.2017.032630070961
   PubMed Web of Science ®Google Scholar
• Esposito S, Principi N. Impacts of the 13-valent pneumococcal conjugate vaccine in children. J Immunol Res. 2015;2015:591580. doi:10.1155/2015/59158026351648
   PubMed Web of Science ®Google Scholar
• Centers for Disease Control and Prevention (CDC). Identification and characterization of Streptococcus pneumoniae; 2017 Available from: www.cdc.gov/meningitis/lab-manual/chpt08-id-characterizationstreppneumo.html Accessed 312, 2019.
   Google Scholar
• Azarsa M, Salami SA, Pourmand MR, Forushani AR, Kazemian H. Evaluation of lytB gene for detection of Streptococcus pneumoniae in isolates and clinical specimens by real-Time PCR. Jundishapur J Microbiol. 2017;10(6):e14378. doi:10.5812/jjm
   Web of Science ®Google Scholar
• Wayne PA Clinical and Laboratory Standards Institute: performance standards for antimicrobial susceptibility testing: 26th informational supplement. CLSI document M100-S20. 2015 11.
   Google Scholar
• Coskun-Ari FF, Guldemir D, Durmaz R. One-step multiplex PCR assay for detecting Streptococcus pneumoniae serogroups/types covered by 13-valent pneumococcal conjugate vaccine (PCV13). PLoS One. 2012;7(12):e50406. doi:10.1371/journal.pone.005040623226519
   PubMed Web of Science ®Google Scholar
• Centers for Disease Control and Prevention (CDC). Multiplex conventional PCR schemes for pneumococcal serotype deduction; 2018 Available from https://www.cdc.gov/streplab/pneumococcus/resources.html. Accessed 124, 2020.
   Google Scholar
• Centers for Disease Control and Prevention (CDC). Global pneumococcal disease and vaccine; 2017 Available from: https://www.cdc.gov/pneumococcal/global.html. Accessed 312, 2019..
   Google Scholar
• Nagaraj S, Kalal BS, Manoharan A, Shet A. Streptococcus pneumoniae serotype prevalence and antibiotic resistance among young children with invasive pneumococcal disease: experience from a tertiary care center in South India. Germs. 2017;7(2):78–85. doi:10.18683/germs.2017.111228626738
   PubMedGoogle Scholar
• Tai SS. Streptococcus pneumoniae serotype distribution and pneumococcal conjugate vaccine serotype coverage among pediatric patients in East and Southeast Asia, 2000–2014: a pooled data analysis. Vaccines. 2016;4:1. doi:10.3390/vaccines4010004
   Web of Science ®Google Scholar
• Johnson HL, Deloria-Knoll M, Levine OS, et al. Systematic evaluation of serotypes causing invasive pneumococcal disease among children under five: the pneumococcal global serotype project. PLoS Med. 2010;7:10. doi:10.1371/journal.pmed.1000348
   Web of Science ®Google Scholar
• Medeiros MIC, Almeida SCG, Guerra M, da Silva P, Carneiro AMM, de Andrade D. Distribution of Streptococcus pneumoniae serotypes in the northeast macro-region of Sao Paulo state/Brazil after the introduction of conjugate vaccine. BMC Infect Dis. 2017;17(1):590. doi:10.1186/s12879-017-2696-y28841854
   PubMed Web of Science ®Google Scholar
• Kwambana-Adams B, Hanson B, Worwui A, et al. Rapid replacement by non-vaccine pneumococcal serotypes may mitigate the impact of the pneumococcal conjugate vaccine on nasopharyngeal bacterial ecology. Sci Rep. 2017;7(1):8127. doi:10.1038/s41598-017-08717-028811633
   PubMed Web of Science ®Google Scholar
• Choi EH, Kim SH, Eun BW, et al. Streptococcus pneumoniae serotype 19A in children, South Korea. Emerg Infect Dis. 2008;14(2):275–281. doi:10.3201/eid1402.07080718258121
   PubMed Web of Science ®Google Scholar
• Kim SH, Bae IK, Park D, et al. Serotype distribution and antimicrobial resistance of streptococcus pneumoniae isolates causing invasive and noninvasive pneumococcal diseases in Korea from 2008 to 2014. Biomed Res Int. 2016;2016:6950482.27314035
   PubMed Web of Science ®Google Scholar
• Sugimoto N, Yamagishi Y, Hirai J, et al. Invasive pneumococcal disease caused by mucoid serotype 3 Streptococcus pneumoniae: a case report and literature review. BMC Res Notes. 2017;10(1):21. doi:10.1186/s13104-016-2353-328057059
   PubMedGoogle Scholar
• Maraki S, Mavromanolaki VE, Stafylaki D, Hamilos G, Samonis G. The evolving epidemiology of serotype distribution and antimicrobial resistance of streptococcus pneumoniae strains isolated from adults in Crete, Greece, 2009–2016. Infect Chemother. 2018;50(4):328–339. doi:10.3947/ic.2018.50.4.32830600656
   PubMed Web of Science ®Google Scholar
• Shah AS, Knoll MD, Sharma PR, et al. Invasive pneumococcal disease in Kanti Children’s Hospital, Nepal, as observed by the South Asian Pneumococcal Alliance network. Clin Infect Dis. 2009;48(Suppl 2):S123–S128. doi:10.1086/59649019191607
   PubMed Web of Science ®Google Scholar
• Manoharan A, Manchanda V, Balasubramanian S, et al. Invasive pneumococcal disease in children aged younger than 5 years in India: a surveillance study. Lancet Infect Dis. 2017;17(3):305–312. doi:10.1016/S1473-3099(16)30466-227956163
   PubMed Web of Science ®Google Scholar
• Wang CY, Chen YH, Fang C, et al. Antibiotic resistance profiles and multidrug resistance patterns of Streptococcus pneumoniae in pediatrics: a multicenter retrospective study in mainland China. Medicine. 2019;98(24):e15942. doi:10.1097/MD.000000000001594231192930
   PubMed Web of Science ®Google Scholar
• Sadeghi J, Ahamadi A, Douraghi M, Pourshafie MR, Talebi M. Molecular analysis of pbp2b in Streptococcus pneumonia isolated from clinical and normal flora samples. Curr Microbiol. 2015;70(2):206–211. doi:10.1007/s00284-014-0704-725274412
   PubMed Web of Science ®Google Scholar
• Choe YJ, Lee HJ, Lee H, et al. Emergence of antibiotic-resistant non-vaccine serotype pneumococci in nasopharyngeal carriage in children after the use of extended-valency pneumococcal conjugate vaccines in Korea. Vaccine. 2016;34(40):4771–4776. doi:10.1016/j.vaccine.2016.08.03027546875
   PubMed Web of Science ®Google Scholar
• Kim SH, Song JH, Chung DR, et al. Changing trends in antimicrobial resistance and serotypes of Streptococcus pneumoniae isolates in Asian countries: an Asian Network for Surveillance of Resistant Pathogens (ANSORP) study. Antimicrob Agents Chemother. 2012;56(3):1418–1426. doi:10.1128/AAC.05658-1122232285
   PubMed Web of Science ®Google Scholar
• Azadegan A, Ahmadi A, Lari AR, Talebi M. Detection of the efflux-mediated erythromycin resistance transposon in Streptococcus pneumoniae. Ann Lab Med. 2015;35(1):57–61. doi:10.3343/alm.2015.35.1.5725553281
   PubMed Web of Science ®Google Scholar
• Cassiolato AP, Almeida SCG, Andrade AL, Minamisava R, Brandileone MCC. Expansion of the multidrug-resistant clonal complex 320 among invasive Streptococcus pneumoniae serotype 19A after the introduction of a ten-valent pneumococcal conjugate vaccine in Brazil. PLoS One. 2018;13(11):e0208211. doi:10.1371/journal.pone.020821130496296
   PubMed Web of Science ®Google Scholar