Comparison of Phenotypic and Genotypic Patterns of Antimicrobial-Resistant Bacteroides fragilis Group Isolated from Healthy Individuals in Vietnam and Japan

References

• Nagy E, Urban E, Nord CE; ESCMID Study Group on Antimicrobial Resistance in Anaerobic Bacteria. Antimicrobial susceptibility of Bacteroides fragilis group isolates in Europe: 20 years of experience. Clin Microbiol Infect. 2011;17(3):371–379. doi:10.1111/j.1469-0691.2010.03256.x20456453
   PubMed Web of Science ®Google Scholar
• Hecht DW. Prevalence of antibiotic resistance in anaerobic bacteria: worrisome developments. Clin Infect Dis. 2004;39(1):92–97. doi:10.1086/42155815206059
   PubMed Web of Science ®Google Scholar
• Galvao BP, Meggersee RL, Abratt VR. Antibiotic resistance and adhesion potential of Bacteroides fragilis clinical isolates from Cape Town, South Africa. Anaerobe. 2011;17(4):142–146. doi:10.1016/j.anaerobe.2011.02.00921530667
   PubMed Web of Science ®Google Scholar
• Niestepski S, Harnisz M, Korzeniewska E, et al. The emergence of antimicrobial resistance in environmental strains of the Bacteroides fragilis group. Environ Int. 2019;124:408–419. doi:10.1016/j.envint.2018.12.05630682596
   PubMed Web of Science ®Google Scholar
• Kierzkowska M, Majewska A, Mlynarczyk G. Trends and impact in antimicrobial resistance among bacteroides and parabacteroides species in 2007–2012 compared to 2013–2017. Microb Drug Resist. 2020;26(12):1452–1457. doi:10.1089/mdr.2019.046232407191
   PubMed Web of Science ®Google Scholar
• Kierzkowska M, Majewska A, Szymanek-Majchrzak K, Sawicka-Grzelak A, Mlynarczyk A, Mlynarczyk G. In vitro effect of clindamycin against Bacteroides and Parabacteroides isolates in Poland. J Glob Antimicrob Resist. 2018;13:49–52. doi:10.1016/j.jgar.2017.11.00129129778
   PubMed Web of Science ®Google Scholar
• Wexler HM. Bacteroides: the good, the bad, and the nitty-gritty. Clin Microbiol Rev. 2007;20(4):593–621. doi:10.1128/CMR.00008-0717934076
   PubMed Web of Science ®Google Scholar
• Whittle G, Shoemaker NB, Salyers AA. The role of Bacteroides conjugative transposons in the dissemination of antibiotic resistance genes. Cell Mol Life Sci. 2002;59(12):2044–2054. doi:10.1007/s00018020000412568330
   PubMed Web of Science ®Google Scholar
• Shoemaker NB, Vlamakis H, Hayes K, Salyers AA. Evidence for extensive resistance gene transfer among Bacteroides spp. and among bacteroides and other genera in the human colon. Appl Environ Microbiol. 2001;67(2):561–568. doi:10.1128/AEM.67.2.561-568.200111157217
   PubMed Web of Science ®Google Scholar
• Stentz R, Horn N, Cross K, et al. Cephalosporinases associated with outer membrane vesicles released by Bacteroides spp. protect gut pathogens and commensals against beta-lactam antibiotics. J Antimicrob Chemother. 2015;70(3):701–709. doi:10.1093/jac/dku46625433011
   PubMed Web of Science ®Google Scholar
• Nahui Palomino RA, Vanpouille C, Costantini PE, Margolis L. Microbiota-host communications: bacterial extracellular vesicles as a common language. PLoS Pathog. 2021;17(5):e1009508. doi:10.1371/journal.ppat.100950833984071
   PubMed Web of Science ®Google Scholar
• Bui TM, Hirai I, Ueda S, et al. Carriage of Escherichia coli producing CTX-M-type extended-spectrum beta-lactamase in healthy vietnamese individuals. Antimicrob Agents Chemother. 2015;59(10):6611–6614. doi:10.1128/AAC.00776-1526195526
   PubMed Web of Science ®Google Scholar
• Yamamoto Y, Kawahara R, Fujiya Y, et al. Wide dissemination of colistin-resistant Escherichia coli with the mobile resistance gene mcr in healthy residents in Vietnam. J Antimicrob Chemother. 2019;74(2):523–524. doi:10.1093/jac/dky43530380052
   PubMed Web of Science ®Google Scholar
• Kawahara R, Fujiya Y, Yamaguchi T, et al. Most domestic livestock possess colistin-resistant commensal Escherichia coli harboring mcr in a rural community in Vietnam. Antimicrob Agents Chemother. 2019;63(6). doi:10.1128/AAC.00594-19
   Web of Science ®Google Scholar
• Clinical and Laboratory Standards Institute. Methods for Antimicrobial Susceptibility Testing for Anaerobic Bacteria, CLSI Standard M11 (Ninth Ed.). Clinical and Laboratory Standards Institute; 2018.
   Google Scholar
• Nakano V, Avila-Campos MJ. Survey of antimicrobial susceptibility patterns of the bacteria of the Bacteroides fragilis group isolated from the intestinal tract of children. Mem Inst Oswaldo Cruz. 2004;99(3):319–324. doi:10.1590/S0074-0276200400030001415273807
   PubMed Web of Science ®Google Scholar
• Boente RF, Ferreira LQ, Falcao LS, et al. Detection of resistance genes and susceptibility patterns in Bacteroides and Parabacteroides strains. Anaerobe. 2010;16(3):190–194. doi:10.1016/j.anaerobe.2010.02.00320159050
   PubMed Web of Science ®Google Scholar
• Narimani T, Douraghi M, Owlia P, et al. Heterogeneity in resistant fecal Bacteroides fragilis group collected from healthy people. Microb Pathog. 2016;95:1–6. doi:10.1016/j.micpath.2016.02.01726945562
   PubMed Web of Science ®Google Scholar
• Kulagina EV, Efimov BA, Maximov PY, Kafarskaia LI, Chaplin AV, Shkoporov AN. Species composition of Bacteroidales order bacteria in the feces of healthy people of various ages. Biosci Biotechnol Biochem. 2012;76(1):169–171. doi:10.1271/bbb.11043422232251
   PubMed Web of Science ®Google Scholar
• Ogane K, Tarumoto N, Kodana M, et al. Antimicrobial susceptibility and prevalence of resistance genes in Bacteroides fragilis isolated from blood culture bottles in two tertiary care hospitals in Japan. Anaerobe. 2020;64:102215. doi:10.1016/j.anaerobe.2020.10221532574601
   PubMed Web of Science ®Google Scholar
• Tran CM, Tanaka K, Watanabe K, Tanaka K, Watanabe K. PCR-based detection of resistance genes in anaerobic bacteria isolated from intra-abdominal infections. J Infect Chemother. 2013;19(2):279–290. doi:10.1007/s10156-012-0532-223338012
   PubMed Web of Science ®Google Scholar
• Parker AC, Smith CJ. Genetic and biochemical analysis of a novel Ambler class A beta-lactamase responsible for cefoxitin resistance in Bacteroides species. Antimicrob Agents Chemother. 1993;37(5):1028–1036. doi:10.1128/AAC.37.5.10288517690
   PubMed Web of Science ®Google Scholar
• Eitel Z, Sóki J, Urbán E, Nagy E. The prevalence of antibiotic resistance genes in Bacteroides fragilis group strains isolated in different European countries. Anaerobe. 2013;21:43–49. doi:10.1016/j.anaerobe.2013.03.00123500457
   PubMed Web of Science ®Google Scholar
• Kouhsari E, Mohammadzadeh N, Kashanizadeh MG, et al. Antimicrobial resistance, prevalence of resistance genes, and molecular characterization in intestinal Bacteroides fragilis group isolates. APMIS. 2019;127(6):454–461. doi:10.1111/apm.1294330803024
   PubMed Web of Science ®Google Scholar
• Liu CY, Huang YT, Liao CH, Yen LC, Lin HY, Hsueh PR. Increasing trends in antimicrobial resistance among clinically important anaerobes and Bacteroides fragilis isolates causing nosocomial infections: emerging resistance to carbapenems. Antimicrob Agents Chemother. 2008;52(9):3161–3168. doi:10.1128/AAC.00355-0818625771
   PubMed Web of Science ®Google Scholar
• Ulger Toprak N, Akgul O, Bilgin H, et al. Frequency and associated factors for carbapenem-non-susceptible Bacteroides fragilis group bacteria colonization in hospitalized patients: case control study in a university hospital in Turkey. Indian J Med Microbiol. 2021;39:518–522. doi:10.1016/j.ijmmb.2021.03.01833812722
   PubMed Web of Science ®Google Scholar
• Takesue Y, Kusachi S, Mikamo H, et al. Antimicrobial susceptibility of common pathogens isolated from postoperative intra-abdominal infections in Japan. J Infect Chemother. 2018;24(5):330–340. doi:10.1016/j.jiac.2018.02.01129555391
   PubMed Web of Science ®Google Scholar
• Jasemi S, Emaneini M, Ahmadinejad Z, et al. Antibiotic resistance pattern of Bacteroides fragilis isolated from clinical and colorectal specimens. Ann Clin Microbiol Antimicrob. 2021;20(1):27. doi:10.1186/s12941-021-00435-w33892721
   PubMed Web of Science ®Google Scholar
• Sood A, Ray P, Angrup A. Phenotypic and genotypic antimicrobial resistance in clinical anaerobic isolates from India. JAC Antimicrob Resist. 2021;3(2):dlab044. doi:10.1093/jacamr/dlab04434223113
   PubMedGoogle Scholar
• Sethi S, Shukla R, Bala K, Gautam V, Angrup A, Ray P. Emerging metronidazole resistance in Bacteroides spp. and its association with the nim gene: a study from North India. J Glob Antimicrob Resist. 2019;16:210–214. doi:10.1016/j.jgar.2018.10.01530342928
   PubMed Web of Science ®Google Scholar
• Veloo ACM, Baas WH, Haan FJ, Coco J, Rossen JW. Prevalence of antimicrobial resistance genes in Bacteroides spp. and Prevotella spp. Dutch clinical isolates. Clin Microbiol Infect. 2019;25(9):1156 e1159–1156 e1113. doi:10.1016/j.cmi.2019.02.017
   Web of Science ®Google Scholar
• Kierzkowska M, Majewska A, Szymanek-Majchrzak K, Sawicka-Grzelak A, Mlynarczyk A, Mlynarczyk G. The presence of antibiotic resistance genes and bft genes as well as antibiotic susceptibility testing of Bacteroides fragilis strains isolated from inpatients of the Infant Jesus Teaching Hospital, Warsaw during 2007–2012. Anaerobe. 2019;56:109–115. doi:10.1016/j.anaerobe.2019.03.00330844502
   PubMed Web of Science ®Google Scholar
• Gajdacs M, Spengler G, Urban E. Identification and antimicrobial susceptibility testing of anaerobic bacteria: rubik’s cube of clinical microbiology? Antibiotics (Basel). 2017;6(4). doi:10.3390/antibiotics6040025
   Web of Science ®Google Scholar
• Rong SMM, Rodloff AC, Stingu CS. Diversity of antimicrobial resistance genes in Bacteroides and Parabacteroides strains isolated in Germany. J Glob Antimicrob Resist. 2021;24:328–334. doi:10.1016/j.jgar.2021.01.00733508481
   PubMed Web of Science ®Google Scholar
• Wang Y, Wang GR, Shelby A, Shoemaker NB, Salyers AA. A newly discovered Bacteroides conjugative transposon, CTnGERM1, contains genes also found in gram-positive bacteria. Appl Environ Microbiol. 2003;69(8):4595–4603. doi:10.1128/AEM.69.8.4595-4603.200312902247
   PubMed Web of Science ®Google Scholar
• Jung JY, Ahn Y, Khare S, Gokulan K, Pineiro SA, Cerniglia CE. An in vitro study to assess the impact of tetracycline on the human intestinal microbiome. Anaerobe. 2018;49:85–94. doi:10.1016/j.anaerobe.2017.12.01129294359
   PubMed Web of Science ®Google Scholar
• Wu L, Xie X, Li Y, et al. Metagenomics-based analysis of the age-related cumulative effect of antibiotic resistance genes in gut microbiota. Antibiotics (Basel). 2021;10(8):1006.34439056
   PubMed Web of Science ®Google Scholar
• Snydman DR, Jacobus NV, McDermott LA, et al. In vitro activities of newer quinolones against bacteroides group organisms. Antimicrob Agents Chemother. 2002;46(10):3276–3279. doi:10.1128/AAC.46.10.3276-3279.200212234859
   PubMed Web of Science ®Google Scholar
• Tanaka K, Vu H, Hayashi M. In vitro activities and spectrum of lascufloxacinKRP-AM1977against anaerobes. J Infect Chemother. 2021;27(8):1265–1269. doi:10.1016/j.jiac.2021.03.02633867268
   PubMed Web of Science ®Google Scholar
• Rusu A, Lungu IA, Moldovan OL, Tanase C, Hancu G. Structural characterization of the millennial antibacterial (fluoro)quinolones-shaping the fifth generation. Pharmaceutics. 2021;13(8):1289. doi:10.3390/pharmaceutics1308128934452252
   PubMed Web of Science ®Google Scholar
• Luvsansharav UO, Hirai I, Niki M, et al. Prevalence of fecal carriage of extended-spectrum beta-lactamase-producing Enterobacteriaceae among healthy adult people in Japan. J Infect Chemother. 2011;17(5):722–725. doi:10.1007/s10156-011-0225-221359543
   PubMed Web of Science ®Google Scholar