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Articles

Toward resolution of species diversity and distribution in the calcified red algal genera Corallina and Ellisolandia (Corallinales, Rhodophyta)

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Pages 2-11 | Received 11 Mar 2014, Accepted 27 Oct 2014, Published online: 21 Mar 2019

REFERENCES

  • Areschoug J.E. 1852. Ordo XII Corallineae. In: Agardh JG [Ed.] Species genera et ordines algarum, seu descriptiones succinctae specierum, generum et ordinum, quibus algarum regnum constituitur. Volumis secundi: Algas florideas complectens. Lundae [Lund], Sweden, pp. 506 – 576.
  • Bailey J.C. & Chapman R.L. 1998. A phylogenetic study of the Corallinales (Rhodophyta) based on nuclear small-subunit rRNA gene sequences. Journal of Phycology 34: 692 – 705.
  • Bittner L., Payri C.E., Maneveldt G.W., Couloux A., Cruaud C., de Reviers B. & Le Gall L. 2011. Evolutionary history of the Corallinales (Corallinophycidae, Rhodophyta) inferred from nuclear, plastidial and mitochondrial genomes. Molecular Phylogenetics and Evolution 61: 697–713.
  • Brodie J. & Zuccarello G.C. 2007. Systematics of the species rich algae: red algal classification, phylogeny and speciation. In: Reconstructing the tree of life: taxonomy and systematics of species rich taxa (Ed. by T.R. Hodkinson & J.A.N. Parnell), pp. 323–336. CRC Press, Taylor and Francis Group, Boca Raton, Florida.
  • Brodie J., Walker R.H., Williamson C. & Irvine L.M. 2013. Epitypification and redescription of Corallina officinalis L., the type of the genus, and C. elongata Ellis et Solander (Corallinales, Rhodophyta). Cryptogamie, Algologie 34: 49–56.
  • Collén J., Porcel B., Carré W., Ball S.G., Chaparro C., Tonon T., Barbeyron T., Michel G., Noel B., Valentin K., Elias M., Artiguenave F., Arun A., Aury J.M., Barbosa-Neto J.F., Bothwell J.H., Bouget F.Y., Brillet L., Cabello-Hurtado F., Capella-Gutiérrez S., Charrier B., Cladière L., Cock J.M., Coelho S.M., Colleoni C., Czjzek M., Da Silva C., Delage L., Denoeud F., Deschamps P., Dittami S.M., Gabaldón T., Gachon C.M., Groisillier A., Hervé C., Jabbari K., Katinka M., Kloareg B., Kowalczyk N., Labadie K., Leblanc C., Lopez P.J., McLachlan D.H., Meslet-Cladiere L., Moustafa A., Nehr Z., Nyvall Collén P., Panaud O., Partensky F., Poulain J., Rensing S.A., Rousvoal S., Samson G., Symeonidi A., Weissenbach J., Zambounis A., Wincker P. & Boyen C. 2013. Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida. Proceedings of the National Academy of Sciences of the United States of America 110: 5247–5252.
  • Darriba D., Taboada G.L., Doallo R. & Posada D. 2012. jModelTest2: more models, new heuristics and parallel computing. Nature Methods 9: 772.
  • Farris J.S., Kallersjo M., Kluge A.G. & Bult C. 1995. Testing significance of incongruence. Cladistics 10: 315–319.
  • Freshwater D.W. & Rueness J. 1994. Phylogenetic relationships of some European Gelidium (Gelidiales, Rhodophyta) species, based on rbcL nucleotide-sequence analysis. Phycologia 33: 187–194.
  • Gabrielson P.W., Miller K.A. & Martone P.T. 2011. Morphometric and molecular analyses confirm two distinct species of Calliarthron (Corallinales, Rhodophyta), a genus endemic to the northeast Pacific. Phycologia 50: 298–316.
  • Garbary D.J. & Johansen H.W. 1982. Scanning electron microscopy of Corallina and Haliptilon (Corallinaceae, Rhodophyta): surface features and their taxonomic implications. Journal of Phycology 18: 211–219.
  • Guiry M.D. & Guiry G.M. 2014. AlgaeBase. World-wide electronic publication, National University of Ireland, Galway.http://www.algaebase.org; searched on 10 February 2014.
  • Hind K., Gabrielson P., Lindstrom S. & Martone P. 2014. Misleading morphologies and the importance of sequencing type specimens for resolving coralline taxonomy (Corallinales, Rhodophyta): Pachyarthron cretaceum is Corallina officinalis. Journal of Phycology 50: 760–764.
  • Hind K.R. & Saunders G.W. 2013a. Molecular markers from three organellar genomes unravel complex taxonomic relationships within the coralline algal genus Chiharaea (Corallinales, Rhodophyta). Molecular Phylogenetics and Evolution 67: 529–540.
  • Hind K.R. & Saunders G.W. 2013b. A molecular phylogenetic study of the tribe Corallineae (Corallinales, Rhodophyta) with an assessment of genus-level taxonomic features and descriptions of novel genera. Journal of Phycology 49: 103–114.
  • Hughey J.R. & Hommersand M.H. 2008. Morphological and molecular systematic study of Chondracanthus (Gigartinaceae, Rhodophyta) from Pacific North America. Phycologia 47: 124–155.
  • Irvine L.M. & Chamberlain Y.M. 1994. Seaweeds of the British Isles, vol. 1 Rhodophyta Pt. 2B. Corallinales, Hildenbrandiales. HMSO, London. 276 pp.
  • Johansen H.W. 1981. Coralline algae: a first synthesis. CRC Press, Boca Raton, Florida. 239 pp.
  • Johnson H.W. 1970. The diagnostic value of reproductive organs in some genera of articulated coralline red algae. British Phycological Journal 5: 79–86.
  • Kato A., Baba M. & Suda S. 2011. Revision of the Mastophoroideae (Corallinales, Rhodophyta) and polyphyly in nongeniculate species widely distributed on Pacific coral reefs. Journal of Phycology 47: 662–672.
  • Kim J.H., Guiry M.D., Oak J.H., Choi D.-S., Kang S.-H., Chung H. & Choi H.-G. 2007. Phylogenetic relationships within the tribe Janieae (Corallinales, Rhodophyta) based on molecular and morphological data: a reappraisal of Jania. Journal of Phycology 43: 1310–1319.
  • Leliaert F., Verbruggen H., Vanormelingen P., Steen F., Lopez-Bautista J.M., Zuccarello G.C. & De Clerck O. 2014. DNA-based species delimitation in algae. European Journal of Phycology 49: 179–196.
  • Lindstrom S.C., Hughey J.R. & Martone P.T. 2011. New, resurrected and redefined species of Mastocarpus (Phyllophoraceae, Rhodophyta) from the northeast Pacific. Phycologia 50: 661–683.
  • Martone P.T., Lindstrom S.C., Miller K.A. & Gabrielson P.W. 2012. Chiharaea and Yamadaia (Corallinales, Rhodophyta) represent reduced and recently derived articulated coralline morphologies. Journal of Phycology 48: 859–868.
  • Mols-Mortensen A., Neefus C.D., Nielsen R., Gunnarsson K., Egilsdottir S., Pedersen P.M. & Brodie J. 2012. New insights into the biodiversity and generic relationships of foliose Bangiales (Rhodophyta) in Iceland and the Faroe Islands. European Journal of Phycology 47: 146–159.
  • Nelson W.A. 2009. Calcified macroalgae – critical to coastal ecosystems and vulnerable to change: a review. Marine and Freshwater Research 60: 787.
  • Rambaut A. & Drummond A.J. 2007. Tracer v1.5. http://tree.bio.ed.ac.uk/software/tracer/.
  • Robba L., Russell S., Barker G. & Brodie J. 2006. The use of the mitochondrial cox 1 marker for use in DNA barcoding of red algae (Rhodophyta). American Journal of Botany 93: 1101–1108.
  • Rogers S.O., Bendich A.J., Hall G.E. Jr., Spiker S., Mackenzie S.A., Price C.A. & Bissling T. 1994. Nucleic acid extraction from plant tissue. In: Plant molecular biology manual (Ed. by S.B. Gelvin & R.A. Schilperoort), pp. 1–11. Kluwer, London.
  • Ronquist F., Teslenko M., van der Mark P., Ayres D.L., Darling A., Höhna S., Larget B., Liu L., Suchard M.A. & Huelsenbeck J.P. 2012. MrBayes 3.2: efficient bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539–542.
  • Saunders G.W. 2005. Applying DNA barcoding to red macroalgae: a preliminary appraisal holds promise for future applications. Philosophical Transactions of the Royal Society London B Biological Sciences 360: 1879 –1888.
  • Silva P.C. & Johansen H.W. 1986. A reappraisal of the order Corallinales (Rhodophyceae). British Phycological Journal 21: 245–254.
  • Steneck R.S. & Paine R.T. 1986. Ecological and taxonomic studies of shallow-water encrusting Corallinaceae (Rhodophyta) of the boreal northeastern Pacific. Phycologia 25: 221–240.
  • Sutherland J.E., Lindstrom S.C., Nelson W.A., Brodie J., Lynch M.D.J., Hwang M.S., Choi H.-G., Miyata M., Kikuchi N., Oliveira M.C., Farr T., Neefus C., Mols-Mortensen A., Milstein D. & Müller K.M. 2011. A new look at an ancient order: generic revision of the Bangiales (Rhodophyta). Journal of Phycology 47: 1131–1151.
  • Swofford D.L. 2003. PAUP*. Phylogenetic Analysis Using Parsimony (*and other methods). Version 4. Sinauer Associates, Sunderland, Massachusetts.
  • Vergés A., Comalada N., Sanchez N. & Brodie J. 2013. A reassessment of the foliose Bangiales (Rhodophyta) in the Balearic Islands including the proposed synonymy of Pyropia olivii with Pyropia koreana. Botanica Marina 56: 229–240.
  • Walker R.H., Brodie J., Russell S., Irvine L.M. & Orfanidis S. 2009. Biodiversity of coralline algae in the northeastern Atlantic including Corallina caespitosa sp. nov. (Corallinoideae, Rhodophyta). Journal of Phycology 45: 287–297.
  • Woelkerling W.J. 1988. The coralline red algae: an analysis of the genera and subfamilies of non-geniculate Corallinaceae. British Museum (Natural History), London, and Oxford University Press, Oxford, UK. 268 pp.
  • Womersley H.B.S & Johansen H.W. 1996. Subfamily Corallinoideae (Areschoug) Foslie 1908: 19. In: The marine benthic flora of southern Australia – Part IIIB – Gracilariales, Rhodymeniales, Corallinales and Bonnemaisoniales (Ed. by H.B.S. Womersley), pp. 288–317. Australian Biological Resources Study and the State herbarium of South Australia, Adelaide & Canberra.
  • Zwickl D.J. 2006. Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion. Ph.D dissertation, The University of Texas at Austin.

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