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Articles

Jacksonvillea apiculata (Oscillatoriales, Cyanobacteria) gen. & sp. nov.: a new genus of filamentous, epipsamic cyanobacteria from North Florida

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Pages 284-295 | Received 04 May 2016, Accepted 25 Nov 2016, Published online: 21 Mar 2019

REFERENCES

  • Boyer S.L., Fletchner V. & Johansen J.R. 2001. Is the 16S–23S rRNA internal transcribed spacer (ITS) region a good tool for use in molecular systematics and population genetics? A case study in cyanobacteria. Molecular Biology and Evolution 18: 1057–1069.
  • Boyer S.L., Johansen J.R. & Howard G.L. 2002. Phylogeny and genetic variance in terrestrial Microcoleus (Cyanophyceae) species based on sequence analysis of the 16S rRNA gene and associated 16S–23S ITS region. Journal of Phycology 38: 1222–1225.
  • Casamatta D.A., Vis M.L. & Sheath R.G. 2003. Cryptic species in cyanobacterial systematics: a case study of Phormidium retzii (Oscillatoriales) using RAPD molecular markers and 16S rDNA gene sequence data. Aquatic Botany 77: 295–309.
  • Casamatta D.A., Stanić M., Gantar M. & Richardson L.L. 2012. Characterization of Roseofilum reptotaenium (Oscillatoriales, Cyanobacteria) gen. et sp. nov. isolated from Caribbean black band disease. Phycologia 51: 489–499.
  • Chatchawan T., Komárek J., Strunecký O., Šmarda J. & Peerapornpisal Y. 2012. Oxynema, a new genus separated from the genus Phormidium (Cyanophyta). Cryptogamie, Algologie 33: 41–59.
  • Copeland J.J. 1936. Yellowstone thermal Myxophyceae. Annals of the New York Academy of Sciences 36: 1–232.
  • Dadheech P.K., Abed R.M.M., Mahmoud H., Mohan M.K. & Krienitz L. 2012. Polyphasic characterization of cyanobacteria isolated from desert crusts, and the description of Desertifilum tharense gen. et sp. nov. (Oscillatoriales). Phycologia 51: 260–270.
  • Dadheech P.K., Mahmoud H., Kotut K. & Krienitz L. 2014. Desertifilum fontinale sp. nov. (Oscillatoriales, Cyanobacteria) from a warm spring in East Africa, based on conventional and molecular studies. Fottea 14: 129–140.
  • Desikachary T.V. 1959. Cyanophyta. Indian Council of Agricultural Research, New Delhi. 686 pp.
  • Dunn A.E., Dobberfuhl D.R. & Casamatta D.A. 2008. A survey of algal epiphytes from Vallisneria americana Michx. (Hydrochaitaceae) in the Lower St. Johns River, Florida. Southeastern Naturalist 7: 229–244.
  • Dvořák P., Hašler P. & Poulíčková A. 2012. Phylogeography of the Microcoleus vaginatus (cyanobacteria) from three continents – a spatial and temporal characterization. PLoS ONE 7: e40153. DOI:10.1371/journal.pone.0040153.
  • Dvořák P., Hindaă F., Hašler P., Handáková A. & Poulíčková A. 2014. Morphological and molecular studies of Neosynechococcus sphagnicola, gen. et sp. nov. (Cyanobacteria, Synechococcales). Phytotaxa 170: 24–34.
  • Edgar R.C. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research 32: 1792–1797.
  • Engene N., Rottacker E.C., Kaštovský J., Byrum T., Choi H., Ellisman M.H., Komárek J. & Gerwick W.H. 2012. Moorea producens gen. nov., sp. nov. and Moorea bouillonii comb. nov., tropical marine cyanobacteria rich in bioactive secondary metabolites. International Journal of Systematic and Evolutionary Microbiology 62: 1171–1178.
  • Felsenstein J. & Churchill G.A. 1996. A hidden Markov model approach to variation among sites in rate of evolution. Molecular Biology and Evolution 13: 93–104.
  • Frémy A.P. 1930. Les Myxophycées de l'Afrique équatoriale française. Archives de Botanique, Mémoires 3: 1–508.
  • Gama W.A. Jr.,Azevedo M.T.D., Komárková-Legnerová J. & Sant'Anna C.L. 2012. A new species of Lemmermanniella (Cyanobacteria) from the Atlantic Rainforest, Brazil. Brazilian Journal of Botany 35: 319–324.
  • Gama W.A. Jr.,Laughinghouse H.D. & Sant'Anna C.L. 2014. How diverse are coccoid cyanobacteria? A case study of terrestrial habitats from the Atlantic Rainforest (São Paulo, Brazil). Phytotaxa 178: 61–97.
  • Gardner N.L. 1927. New Myxophyceae from Porto Rico. Memoirs of the New York Botanical Garden 7: 1–144.
  • Geitler L. 1932. Cyanophyceae. In: Rabenhorst's Kryptogamenflora (Ed. by R. Kolkwitz), vol. 14. Akademische Verlagsgesselschaft, Leipzig. 1196 pp.
  • Gold-Morgan M., Montejano G. & Komárek J. 1994. Freshwater epiphytic cyanoprokaryotes from central Mexico. 2. Heterogeneity of the genus Xenococcus. Archiv für Protistenkunde 144: 398–411.
  • Hašler P., Štěpánková J., Špačková J., Neustupa J., Kitner M., Hekera P., Veselá J., Burian J. & Poulíčková A. 2008. Epipelic cyanobacteria and algae: a case study from Czech ponds. Fottea 8: 133–146.
  • Hašler P., & Pouličková A. 2010. Diversity, taxonomy and autecology of autochtonous epipelic cyanobacteria of the genus Komvophoron (Borziaceae, Oscillatoriales): a study on populations from the Czech Republic and British Isles. Biologia 65: 7–16.
  • Hašler P., Dvořák P., Johansen J.R., Kitner M., Ondřej V. & Poulíčková A. 2012. Morphological and molecular study of epipelic filamentous genera Phormidium, Microcoleus and Geitlerinema (Oscillatoriales, Cyanophyta/Cyanobacteria). Fottea 12: 341–356.
  • Hašler P., Dvořák P., Poulíčková A. & Casamatta D.A. 2014. A novel genus Ammassolinea gen. nov. (Cyanobacteria) isolated from sub-tropical epipelic habitats. Fottea 14: 241–248.
  • Hentschke G.S., Johansen J.R., Pietrasiak N., Fiore M.F., Rigonato J., Sant'anna C.L. & Komaărek J. 2016. Phylogenetic placement of Dapisostemon gen. nov. and Streptostemon, two tropical heterocytous genera (Cyanobacteria). Phytotaxa 245: 129–143.
  • Johansen J.R. & Casamatta D.A. 2005. Recognizing cyanobacterial diversity through adoption of a new species paradigm. Algological Studies 117: 71–93.
  • Jungblut A.D., Lovejoy C. & Vincent W.F. 2010. Global distribution of cyanobacterial ecotypes in the cold biosphere. ISME Journal 4: 191–202.
  • Komárek J. 1985. Do all cyanophytes have a cosmopolitan distribution? Survey of the freshwater cyanophyte flora of Cuba. Archiv für Hydrobiologie/Algological Studies 38–39: 359–386.
  • Komárek J. 1989 a. Studies on the Cyanophytes of Cuba 4–6. Folia Geobotanica Phytotaxonomica 24: 57–97.
  • Komárek J. 1989 b. Studies on the Cyanophytes of Cuba 7–9. Folia Geobotanica Phytotaxonomica 24: 171–206.
  • Komárek J. 1993. Validation of the genera Gloeocapsopsis and Asterocapsa (Cyanoprokaryota) with regard to species from Japan, Mexico and Himalayas. Bulletin of the National Science Museum, Tokyo, Series B, Botany 19: 19–37.
  • Komárek J. 2003 a. Problem of the taxonomic category “species” in cyanobacteria. Algological Studies 109: 281–297.
  • Komárek J. 2003 b. Two Camptylonemopsis species (Cyanoprokaryotes) from Mata Atlantica in coastal Brazil. Preslia 75: 223–232.
  • Komárek J. 2005. Studies on the Cyanophytes (Cyanobacteria, Cyanoprokaryota) of Cuba: (11) Freshwater Anabaena species. Preslia 77: 11–234.
  • Komárek J & Anagnostidis K. 2005. Cyanoprokaryota. 2. Teil: Oscillatoriales. In: Süsswasserflora von Mitteleuropa (Ed. by B. Büdel, G. Gärtner, L. Krienitz & M. Schagerl), vol. 19/2. Elsevier, München. 759 pp.
  • Komárek J. & Komárková-Legnerová J. (2002): Contribution to the knowledge of natural populations of planktic cyanoprokaryotes from central Mexico. Preslia 74: 207–233.
  • Komárek J. & Komárková-Legnerová J. 2007 a. Taxonomic evaluation of cyanobacterial microflora from alkaline marshes of northern Belize. 1. Phenotypic diversity of coccoid morphotypes. Nova Hedwigia 84: 65–111.
  • Komárek J. & Komárková-Legnerová J. 2007 b. Several rare freshwater planktic cyanobacteria (cyanoprokaryotes) from reservoirs in South America. Hoehnea 34: 49–58.
  • Komárek J., Montejano G., Gold-Morgan M. & Tavera R. 1996. Taxonomic identity and distribution of tropical cyanoprokaryotes (Cyanophyta, Cyanobacteria): an example from central Mexico. Beihefte zur Nova Hedwigia 112: 49–54.
  • Komárek J., Ventura S., Turicchia S., Komárková J., Mascalchi C. & Soldati E. 2005. Cyanobacterial diversity in alkaline marshes of northern Belize (Central America). Archiv für Hydrobiologie/Algological Studies 117: 251–264.
  • Komárek J., Zapomělová E., Šmarda J., Kopecký J., Rejmánková E., Woodhaouse J., Neilan B.A. & Komárková J. 2013. Polyphasic evaluation of Limnoraphis robusta a water-bloom forming cyanobacterium from Lake Atitlán, Guatemala, with a description of Limnoraphis gen. nov. Fottea 13: 39–52.
  • Komárek J., Kaštovský J., Mareš J. & Johansen J.R. 2014. Taxonomic classification of cyanoprokaryotes (cyanobacterial genera) 2014 using a polyphasic approach. Preslia 86: 295–335.
  • Larkin M.A., Blackshields G., Brown N.P., Chenna R., McGettigan P.A., McWilliam H., Valentin F., Wallace I.M., Wilm A., Lopez R., Thompson J.D., Gibson T.J. & Higgins D.G. 2007. Clustal W and Clustal X version 2.0. Bioinformatics 23: 2947–2948.
  • McGregor G.B. & Sendall B.C. 2013. Komvophoron kgarii sp. nov. (Oscillatoriales), a new epipelic cyanobacterium from subtropical eastern Australia. Phycologia 52: 472–480.
  • Montejano G., Gold-Morgan M. & Komárek J. 1993. Freshwater epiphytic Cyanoprokaryotes from central Mexico. 1. Cyanocystis and Xenococcus. Archiv für Protistenkunde 143: 237–247.
  • Perkerson R.B., Perkerson E.A. & Casamatta D.A. 2010. Phylogenetic examination of the cyanobacterial genera Geitlerinema and Limnothrix (Pseudanabaenaceae) using 16S rDNA gene sequence data. Algological Studies 134: 1–16.
  • Posada D. 2008. jModelTest: phylogenetic model averaging. Molecular Biology and Evolution 25: 1253–1256.
  • Rejmánková E., Komárek J. & Komárková J. 2004. Cyanobacteria a neglected component of biodiversity: patterns of species diversity in inland marshes of northern Belize (Central America). Diversity and Distributions 10: 189–199.
  • Rippka R., Deruelles J., Waterbury J.B., Herdmann M. & Stanier R.Y. 1979. Generic assignments, strain histories, and properties of pure cultures of cyanobacteria. Journal of General Microbiology 111: 1–61.
  • Ronquist F. & Huelsenbeck J.P. 2003. MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572–1574.
  • Round F.E. 1953. An investigation of two benthic algal communities in Malhalm Tarn, Yorkshire. Journal of Ecology 41: 174–197.
  • Sant'Anna C.L., Azevedo T.M.P., Kaštovský J. & Komárek J. 2010. Two form-genera of aerophytic heterocytous cyanobacteria from Brasilian rainy forest “Mata Atlântica”. Fottea 10: 217–228.
  • Sant'Anna C.L., Branco L.H.Z., Gama Junior W.A. & Werner V.R. 2011. Checklist of Cyanobacteria from São Paulo State, Brazil. Biota Neotropica 11: 455–495.
  • Sheath R.G. & Cole K.M. 1992. Biogeography of stream macroalgae in North America. Journal of Phycology 28: 448–460.
  • Sherwood A.R., Carlile A.L., Neumann J.M., Kociolek J.P., Johansen J.R., Lowe R.L., Conklin K.Y. & Presting G.G. 2014. The Hawaiian freshwater algae biodiversity survey (2009–2014): systematic and biogeographic trends with an emphasis on the macroalgae. BMC Ecology DOI:10.1186/s12898-014-0028-2.
  • Stamatakis A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688–2690.
  • Staub R. 1961. Research on physiology of nutrients of the planktonic cyanobacterium Oscillatoria rubescens. Schweizerische Zeitschrift für Hydrologie 23: 83–198.
  • Stocks H.S. 2014. A survey of the taxonomy of the cyanobacteria from Northeast Florida, descriptions of novel taxa, and an investigation into the factors which influence the epibenthic cyanobacterial community. M.S. Thesis, University of North Florida, 85 pp.
  • Stocks H.S., Hašler P. & Casamatta D.A. 2013. A survey of benthic, planktonic, epilithic and epiphytic cyanobacteria from Northeast Florida, USA. In: The 19th Symposium of the International Society for Cyanophyte Research (Ed. by Johansen J. R.), p. 91. John Carrol University, Cleveland, Ohio.
  • Strunecký O., Komárek J. & Šmarda J. 2014. Kamptonema (Microcoleaceae, Cyanobacteria), a new genus derived from the polyphyleticPhormidium on the basis of combined molecular and cytomorphological markers. Preslia 86: 193–207.
  • Swofford D.L. 2002. PAUP*: phylogenetic analysis using parsimony (*and other methods), version 4. Sinauer Associates, Sunderland, Massachusetts.
  • Tamura K., Stecher G., Peterson D., Filipski A. & Kumar S. 2013. MEGA6: molecular evolutionary genetics analysis version 6.0. Molecular Biology and Evolution 30: 2725–2729.
  • Taton A., Grubisic S., Brambilla E., De Wit R. & Wilmotte A. 2003. Cyanobacterial diversity in natural and artificial microbial mats of Lake Fryxell (McMurdo Dry Valleys, Antarctica): a morphological and molecular approach. Applied and Environmental Microbiology 69: 5157–5169.
  • Taton A., Grubisic S., Balthasart P., Hodgson D.A., Laybourn-Parry J. & Wilmotte A. 2006. Biogeographical distribution and ecological ranges of benthic cyanobacteria in East Antarctic lakes. FEMS Microbiology Ecology 57: 272–289.
  • Tavera R. & Komárek J. 1996. Cyanoprokaryotes in the volcanic lake of Alchichica, Puebla State, Mexico. Archiv für Hydrobiologie/Algological Studies 83: 511–539.
  • Tavera R., Novelo E. & López S. 2013. Cyanoprokaryota (Cyanobacteria) in karst environments in Yucatán, Mexico. Botanical Sciences 91: 27–52.
  • Tilden J.E. 1910. Minnesota algae. Volume 1. The Myxophyceae of North America and adjacent regions including Central America, Greenland, Bermuda, the West Indies and Hawaii. Report of the Survey, Botanical Series 8: 1–328.
  • Tuimala J. 2006. A primer to phylogenetic analysis using the PHYLIP package. Cambridge, UK: CSC – Scientific Computing Ltd. 55 pp.
  • Turicchia S., Ventura S., Komárková J. & Komárek J. 2009. Taxonomic evaluation of cyanobacterial microflora from alkaline marshes of northern Belize. 2. Diversity of oscillatorialean genera. Nova Hedwigia 89: 165–200.
  • Yarza P., Yilmaz P., Pruesse E., Glöckner F.O., Ludwig W., Schleifer K.-H., Whitman W.B., Euzéby J., Amann R. & Rosselló-Móra R. 2014. Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences. Nature Reviews, Microbiology 12: 635–645.
  • Zucker M. 2003. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Research 31: 3406–3415.

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