Phenotypic and Genotypic Identification of Human Pathogenic asPergilli

• Baddley JW , PappasPG, SmithAC, Moser SA: Epidemiology of Aspergillus terreus at a university hospital. J. Clin. Microbiol.41(12) , 5525–5529 (2003).
   PubMed Web of Science ®Google Scholar
• Hachem RY , KontoyiannisDP, Boktour MR et al.: Aspergillus terreus: an emerging amphotericin B-resistant opportunistic mold in patients with hematologic malignancies. Cancer101(7) , 1594–1600 (2004).
   PubMed Web of Science ®Google Scholar
• Iwen PC , RuppME, LangnasAN, Reed EC, Hinrichs SH: Invasive pulmonary aspergillosis due to Aspergillus terreus: 12-year experience and review of the literature. Clin. Infect. Dis.26(5) , 1092–1097 (1998).
   PubMed Web of Science ®Google Scholar
• Lass-Florl C , GriffK, MayrA et al.: Epidemiology and outcome of infections due to Aspergillus terreus: 10-year single-centre experience.Br. J. Haematol.131(2) , 201–207 (2005).
   PubMed Web of Science ®Google Scholar
• Torres HA , RiveroGA, LewisRE, Hachem R, Raad II, Kontoyiannis DP: Aspergillosis caused by non-fumigatus Aspergillus species: risk factors and in vitro susceptibility compared with Aspergillus fumigatus. Diagn. Microbiol. Infect. Dis.46(1) , 25–28 (2003).
   PubMed Web of Science ®Google Scholar
• Peterson SW : Phylogenetic relationships in Aspergillus based upon rDNA sequence analysis. In:Integration of Modern Taxonomic Methods For Penicillium and Aspergillus Classification. Samson RA, Pitt JI (Eds). Harwood Academic Publishers, Amsterdam, The Netherlands, 323–355 (2000).
   Google Scholar
• Balajee SA , NickleD, VargaJ, MarrKA: Molecular studies reveal frequent misidentification of Aspergillus fumigatus by morphotyping.Eukaryot. Cell5(10) , 1705–1712 (2006).
   PubMedGoogle Scholar
• Balajee SA , GribskovJ, BrandtM, ItoJ, FothergillA, MarrKA: Mistaken identity: Neosartorya pseudofischeri and its anamorph masquerading as Aspergillus fumigatus.J. Clin. Microbiol.43(12) , 5996–5999 (2005).
   PubMed Web of Science ®Google Scholar
• Balajee SA , GribskovJL, HanleyE, Nickle D, Marr KA: Aspergillus lentulus sp. nov., a new sibling species of A. fumigatus. Eukaryot. Cell4(3) , 625–632 (2005).
   PubMedGoogle Scholar
• Klich MA : Identification of common Aspergillus species. In:Centralbureau voor Schimmelcultures, Volume 1. Utrecht, The Netherlands (2002).
   Google Scholar
• McClenny N : Laboratory detection and identification of Aspergillus species by microscopic observation and culture: the traditional approach.Med. Mycol.43(Suppl. 1) , S125–S128 (2005).
   PubMed Web of Science ®Google Scholar
• Kozakakiewicz Z : Aspergillus Species in Stored Products. C.A.B International Mycoloigal Institute (CMI), Ferry Lane, Kew, Surrey, UK (1989).
   Google Scholar
• Raper BK , FennellDI: The Genus Aspergillus. The Williams and Wilkins Company, Baltimore, MD, USA (1965).
   Google Scholar
• Hong SB , ChoHS, ShinHD, FrisvadJC, SamsonRA: Novel Neosartorya species isolated from soil in Korea.Int. J. Syst. Evol. Microbiol.56(Pt 2) , 477–486 (2006).
   PubMed Web of Science ®Google Scholar
• Hong SB , GoSJ, ShinHD, FrisvadJC, SamsonRA: Polyphasic taxonomy of Aspergillus fumigatus and related species.Mycologia6(97) , 1342–1355 (2006).
   Google Scholar
• Guarro J , GeneJ, StchigelAM: Developments in fungal taxonomy.Clin. Microbiol. Rev.12(3) , 454–500 (1999).
   PubMed Web of Science ®Google Scholar
• Taylor JW , GeiserDM, BurtA, Koufopanou V: The evolutionary biology and population genetics underlying fungal strain typing. Clin. Microbiol. Rev.12(1) , 126–146 (1999).
   PubMed Web of Science ®Google Scholar
• Iwen PC , HinrichsSH, RuppME: Utilization of the internal transcribed spacer regions as molecular targets to detect and identify human fungal pathogens.Med. Mycol.40(1) , 87–109 (2002).
   PubMed Web of Science ®Google Scholar
• Lott TJ , KuykendallRJ, ReissE: Nucleotide sequence analysis of the 5.8S rDNA and adjacent ITS2 region of Candida albicans and related species.Yeast9(11) , 1199–1206 (1993).
   PubMed Web of Science ®Google Scholar
• Hinrikson HP , HurstSF, LottTJ, Warnock DW, Morrison CJ: Assessment of ribosomal large-subunit D1-D2, internal transcribed spacer 1, and internal transcribed spacer 2 regions as targets for molecular identification of medically important Aspergillus species. J. Clin. Microbiol.43(5) , 2092–2103 (2005).
   PubMed Web of Science ®Google Scholar
• Henry T , IwenPC, HinrichsSH: Identification of Aspergillus species using internal transcribed spacer regions 1 and 2.J. Clin. Microbiol.38(4) , 1510–1515 (2000).
   PubMed Web of Science ®Google Scholar
• Nikkuni S , NakajimaH, HoshinaSI et al.: Evolutionary relationships among Aspergillus oryzae and related species based on the sequences of 18S rRNA genes and internal transcribed spacers.J. Gen. Appl. Microbiol.44(3) , 225–230 (1998).
   PubMed Web of Science ®Google Scholar
• Pryce TM , PalladinoS, PriceDM et al.: Rapid identification of fungal pathogens in BacT/ALERT, BACTEC, and BBL MGIT media using polymerase chain reaction and DNA sequencing of the internal transcribed spacer regions.Diagn. Microbiol. Infect. Dis.54(4) , 289–297 (2006).
   PubMed Web of Science ®Google Scholar
• Rigo K , VargaJ, TothB, TerenJ, MesterhazyA, KozakiewiczZ: Evolutionary relationships within Aspergillus section Flavi based on sequences of the intergenic transcribed spacer regions and the 5.8S rRNA gene.J. Gen. Appl. Microbiol.48(1) , 9–16 (2002).
   PubMed Web of Science ®Google Scholar
• Sugita C , MakimuraK, UchidaK, YamaguchiH, NagaiA: PCR identification system for the genus Aspergillus and three major pathogenic species: Aspergillus fumigatus, Aspergillus flavus and Aspergillus niger.Med. Mycol.42(5) , 433–437 (2004).
   PubMed Web of Science ®Google Scholar
• Varga J , TothB, KocsubeS et al.: Evolutionary relationships among Aspergillus terreus isolates and their relatives.Antonie Van Leeuwenhoek88(2) , 141–150 (2005).
   PubMed Web of Science ®Google Scholar
• Radford SA , JohnsonEM, Leeming JPet al.: Molecular epidemiological study of Aspergillus fumigatus in a bone marrow transplantation unit by PCR amplification of ribosomal intergenic spacer sequences. J. Clin. Microbiol.36(5) , 1294–1299 (1998).
   PubMed Web of Science ®Google Scholar
• Makimura K , HanazawaR, TakatoriK et al: Fungal flora on board the Mir-Space Station, identification by morphological features and ribosomal DNA sequences.Microbiol. Immunol.45(5) , 357–363 (2001).
   PubMed Web of Science ®Google Scholar
• Verweij PE , MeisJF, van den Hurk P, Zoll J, Samson RA, Melchers WJ: Phylogenetic relationships of five species of Aspergillus and related taxa as deduced by comparison of sequences of small subunit ribosomal RNA. J. Med. Vet. Mycol.33(3) , 185–190 (1995).
   PubMed Web of Science ®Google Scholar
• de Aguirre L , HurstSF, ChoiJS, ShinJH, HinriksonHP, MorrisonCJ: Rapid differentiation of Aspergillus species from other medically important opportunistic molds and yeasts by PCR-enzyme immunoassay.J. Clin. Microbiol.42(8) , 3495–3504 (2004).
   PubMed Web of Science ®Google Scholar
• Erali M , PounderJI, WoodsGL, PettiCA, WittwerCT: Multiplex single-color PCR with amplicon melting analysis for identification of Aspergillus species.Clin. Chem.52(7) , 1443–1445 (2006).
   PubMed Web of Science ®Google Scholar
• Leinberger DM , SchumacherU, Autenrieth IB, Bachmann TT: Development of a DNA microarray for detection and identification of fungal pathogens involved in invasive mycoses. J. Clin. Microbiol.43(10) , 4943–4953 (2005).
   PubMed Web of Science ®Google Scholar
• Kumeda Y , AsaoT: Single-strand conformation polymorphism analysis of PCR-amplified ribosomal DNA internal transcribed spacers to differentiate species of Aspergillus sectionFlavi. Appl. Environ. Microbiol.62(8) , 2947–2952 (1996).
   Web of Science ®Google Scholar
• Kumeda Y , AsaoT: Heteroduplex panel analysis, a novel method for genetic identification of Aspergillus Section Flavi strains.Appl. Environ. Microbiol.67(9) , 4084–4090 (2001).
   PubMed Web of Science ®Google Scholar
• Wang L , YokoyamaK, TakahasiH et al.: Identification of species in Aspergillus section Flavi based on sequencing of the mitochondrial cytochrome B gene.Int. J. Food Microbiol.71(1) , 75–86 (2001).
   PubMed Web of Science ®Google Scholar
• Balajee SA , WeaverM, ImhofA, GribskovJ, MarrKA: Aspergillus fumigatus variant with decreased susceptibility to multiple antifungals.Antimicrob. Agents Chemother.48(4) , 1197–1203 (2004).
   Google Scholar
• Wang L , YokoyamaK, MiyajiM, Nishimura K: Mitochondrial cytochrome b gene analysis of Aspergillus fumigatus and related species. J. Clin. Microbiol.38(4) , 1352–1358 (2000).
   PubMed Web of Science ®Google Scholar
• Yokoyama K , WangL, MiyajiM, Nishimura K: Identification, classification and phylogeny of the Aspergillus section Nigri inferred from mitochondrial cytochrome B gene. FEMS Microbiol. Lett.200(2) , 241–246 (2001).
   PubMed Web of Science ®Google Scholar
• Liu YJ , HallBD: Body plan evolution of ascomycetes, as inferred from an RNA polymerase II phylogeny.Proc. Natl Acad. Sci. USA101(13) , 4507–4512 (2004).
   PubMed Web of Science ®Google Scholar
• Liu M , ChaverriP, HodgeKT: A taxonomic revision of the insect biocontrol fungus Aschersonia aleyrodis, its allies with white stromata and their Hypocrella sexual states.Mycol. Res.110(Pt 5) , 537–554 (2006).
   PubMedGoogle Scholar
• Liu YJ , WhelenS, HallBD: Phylogenetic relationships among ascomycetes: evidence from an RNA polymerse II subunit.Mol. Biol. Evol.16(12) , 1799–1808 (1999).
   PubMed Web of Science ®Google Scholar
• Matheny PB : Improving phylogenetic inference of mushrooms with RPB1 and RPB2 nucleotide sequences (Inocybe; Agaricales).Mol. Phylogenet. Evol.35(1) , 1–20 (2005).
   PubMed Web of Science ®Google Scholar
• Shenoy BD , JeewonR, WuWP, BhatDJ, HydeKD: Ribosomal and RPB2 DNA sequence analyses suggest that Sporidesmium and morphologically similar genera are polyphyletic.Mycol. Res.110(8) , 916–928 (2006).
   PubMedGoogle Scholar
• Maiden MC , BygravesJA, FeilE et al: Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms. Proc. Natl Acad. Sci. USA95(6) , 3140–3145 (1998).
   PubMed Web of Science ®Google Scholar
• Spratt BG : Multilocus sequence typing: molecular typing of bacterial pathogens in an era of rapid DNA sequencing and the internet.Curr. Opin. Microbiol.2(3) , 312–316 (1999).
   PubMed Web of Science ®Google Scholar
• Bougnoux ME , AanensenDM, MorandS et al.: Multilocus sequence typing of Candida albicans: strategies, data exchange and applications. Infect. Genet. Evol.4(3) , 243–252 (2004).
   PubMed Web of Science ®Google Scholar
• Bougnoux ME , DiogoD, FrancoisN et al.: Multilocus sequence typing reveals intrafamilial transmission and microevolutions of Candida albicans isolates from the human digestive tract.J. Clin. Microbiol.44(5) , 1810–1820 (2006).
   PubMed Web of Science ®Google Scholar
• Bougnoux ME , MorandS, d’EnfertC: Usefulness of multilocus sequence typing for characterization of clinical isolates of Candida albicans.J. Clin. Microbiol.40(4) , 1290–1297 (2002).
   PubMed Web of Science ®Google Scholar
• Bougnoux ME , TavantiA, BouchierC et al.: Collaborative consensus for optimized multilocus sequence typing of Candida albicans.J. Clin. Microbiol.41(11) , 5265–5266 (2003).
   PubMed Web of Science ®Google Scholar
• Robles JC , KoreenL, ParkS, PerlinDS: Multilocus sequence typing is a reliable alternative method to DNA fingerprinting for discriminating among strains of Candida albicans.J. Clin. Microbiol.42(6) , 2480–2488 (2004).
   PubMed Web of Science ®Google Scholar
• Tavanti A , CampaD, BertozziA et al.: Candida albicans isolates with different genomic backgrounds display a differential response to macrophage infection.Microbes Infect.8(3) , 791–800 (2006).
   PubMed Web of Science ®Google Scholar
• Tavanti A , DavidsonAD, FordyceMJ, Gow NA, Maiden MC, Odds FC: Population structure and properties of Candida albicans, as determined by multilocus sequence typing. J. Clin. Microbiol.43(11) , 5601–5613 (2005).
   PubMed Web of Science ®Google Scholar
• Tavanti A , DavidsonAD, JohnsonEM et al.: Multilocus sequence typing for differentiation of strains of Candida tropicalis. J. Clin. Microbiol.43(11) , 5593–5600 (2005).
   PubMed Web of Science ®Google Scholar
• Dodgson AR , PujolC, DenningDW, Soll DR, Fox AJ: Multilocus sequence typing of Candida glabrata reveals geographically enriched clades. J. Clin. Microbiol.41(12) , 5709–5717 (2003).
   PubMed Web of Science ®Google Scholar
• Tavanti A , DavidsonAD, GowNA, Maiden MC, Odds FC: Candida orthopsilosis and Candida metapsilosis spp. nov. to replace Candida parapsilosis groups II and III. J. Clin. Microbiol.43(1) , 284–292 (2005).
   PubMed Web of Science ®Google Scholar
• Blaxter ML : The promise of a DNA taxonomy.Philos. Trans. R. Soc. Lond. B. Biol. Sci.359(1444) , 669–679 (2004).
   PubMed Web of Science ®Google Scholar
• Taylor JW , JacobsonDJ, KrokenS et al.: Phylogenetic species recognition and species concepts in fungi.Fungal Genet Biol31(1) , 21–32 (2000).
   Google Scholar
• Koufopanou V , BurtA, SzaroT, TaylorJW: Gene genealogies, cryptic species, and molecular evolution in the human pathogen Coccidioides immitis and relatives (Ascomycota, Onygenales).Mol. Biol. Evol.18(7) , 1246–1258 (2001).
   PubMed Web of Science ®Google Scholar
• Koufopanou V , BurtA, TaylorJW: Concordance of gene genealogies reveals reproductive isolation in the pathogenic fungus Coccidioides immitis.Proc. Natl Acad. Sci. USA94(10) , 5478–5482 (1997).
   PubMed Web of Science ®Google Scholar
• Litvintseva AP , ThakurR, VilgalysR, Mitchell TG: Multilocus sequence typing reveals three genetic subpopulations of Cryptococcus neoformans var. grubii (serotype A), including a unique population in Botswana. Genetics172(4) , 2223–2238 (2006).
   PubMed Web of Science ®Google Scholar
• Gueho E , LeclercMC, de Hoog GS, Dupont B: Molecular taxonomy and epidemiology of Blastomyces and Histoplasmaspecies. Mycoses40(3–4) , 69–81 (1997).
   PubMed Web of Science ®Google Scholar
• Franzot SP , HamdanJS, CurrieBP, Casadevall A: Molecular epidemiology of Cryptococcus neoformans in Brazil and the United States: evidence for both local genetic differences and a global clonal population structure. J. Clin. Microbiol.35(9) , 2243–2251 (1997).
   PubMed Web of Science ®Google Scholar
• Geiser DM , PittJI, TaylorJW: Cryptic speciation and recombination in the aflatoxin-producing fungus Aspergillus flavus.Proc. Natl Acad. Sci. USA95(1) , 388–393 (1998).
   PubMed Web of Science ®Google Scholar
• Savelkoul PH , AartsHJ, de Haas J et al.: Amplified-fragment length polymorphism analysis: the state of an art. J. Clin. Microbiol.37(10) , 3083–3091 (1999).
   PubMed Web of Science ®Google Scholar
• Vos P , HogersR, BleekerM et al.: AFLP: a new technique for DNA fingerprinting.Nucleic Acids Res.23(21) , 4407–4414 (1995).
   PubMed Web of Science ®Google Scholar
• Warris A , KlaassenCH, Meis JFet al.: Molecular epidemiology of Aspergillus fumigatus isolates recovered from water, air, and patients shows two clusters of genetically distinct strains. J. Clin. Microbiol.41(9) , 4101–4106 (2003).
   PubMed Web of Science ®Google Scholar
• Scully LR , BidochkaMJ: The host acts as a genetic bottleneck during serial infections: an insect-fungal model system.Curr. Genet. (2006).
   PubMed Web of Science ®Google Scholar
• Tautz D , RenzM: Simple sequences are ubiquitous repetitive components of eukaryotic genomes.Nucleic Acids Res.12(10) , 4127–4138 (1984).
   PubMed Web of Science ®Google Scholar
• Levinson G , GutmanGA: Slipped-strand mispairing: a major mechanism for DNA sequence evolution.Mol. Biol. Evol.4(3) , 203–221 (1987).
   PubMed Web of Science ®Google Scholar
• Schlotterer C , TautzD: Slippage synthesis of simple sequence DNA.Nucleic Acids Res.20(2) , 211–215 (1992).
   PubMed Web of Science ®Google Scholar
• Bart-Delabesse E , CordonnierC, Bretagne S: Usefulness of genotyping with microsatellite markers to investigate hospital-acquired invasive aspergillosis. J. Hosp. Infect.42(4) , 321–327 (1999).
   PubMed Web of Science ®Google Scholar
• Bart-Delabesse E , HumbertJF, DelabesseE, BretagneS: Microsatellite markers for typing Aspergillus fumigatus isolates.J. Clin. Microbiol.36(9) , 2413–2418 (1998).
   PubMed Web of Science ®Google Scholar
• Bart-Delabesse E , SarfatiJ, DebeaupuisJP et al.: Comparison of restriction fragment length polymorphism, microsatellite length polymorphism, and random amplification of polymorphic DNA analyses for fingerprinting Aspergillus fumigatus isolates. J. Clin. Microbiol.39(7) , 2683–2686 (2001).
   PubMed Web of Science ®Google Scholar
• Bertout S , RenaudF, BartonR et al: Genetic polymorphism of Aspergillus fumigatus in clinical samples from patients with invasive aspergillosis: investigation using multiple typing methods. J. Clin. Microbiol.39(5) , 1731–1737 (2001).
   PubMed Web of Science ®Google Scholar
• Guarro J , SoleM, CastanyR et al.: Use of random amplified microsatellites to type isolates from an outbreak of nosocomial aspergillosis in a general medical ward.Med. Mycol.43(4) , 365–371 (2005).
   PubMed Web of Science ®Google Scholar
• Lair-Fulleringer S , GuillotJ, DesterkeC et al.: Differentiation between isolates of Aspergillus fumigatus from breeding turkeys and their environment by genotyping with microsatellite markers. J. Clin. Microbiol.41(4) , 1798–1800 (2003).
   PubMed Web of Science ®Google Scholar
• Lasker BA : Evaluation of performance of four genotypic methods for studying the genetic epidemiology of Aspergillus fumigatus isolates.J. Clin. Microbiol.40(8) , 2886–2892 (2002).
   PubMed Web of Science ®Google Scholar
• Rosehart K , RichardsMH, BidochkaMJ: Microsatellite analysis of environmental and clinical isolates of the opportunist fungal pathogen Aspergillus fumigatus.J. Med. Microbiol.51(12) , 1128–1134 (2002).
   PubMed Web of Science ®Google Scholar
• Tran-Dinh N , CarterD: Characterization of microsatellite loci in the aflatoxigenic fungi Aspergillus flavus and Aspergillus parasiticus.Mol Ecol9(12) , 2170–2172 (2000).
   Google Scholar
• de Valk HA , MeisJF, CurfsIM, MuehlethalerK, MoutonJW, KlaassenCH: Use of a novel panel of nine short tandem repeats for exact and high-resolution fingerprinting of Aspergillus fumigatus isolates.J. Clin. Microbiol.43(8) , 4112–4120 (2005).
   PubMed Web of Science ®Google Scholar
• Pringle A , BakerDM, PlattJL, WaresJP, LatgeJP, TaylorJW: Cryptic speciation in the cosmopolitan and clonal human pathogenic fungus Aspergillus fumigatus.Evolution Int. J. Org. Evolution59(9) , 1886–1899 (2005).
   PubMed Web of Science ®Google Scholar
• Nielsen J , OliverS: The next wave in metabolome analysis.Trends Biotechnol.23(11) , 544–546 (2005).
   PubMed Web of Science ®Google Scholar
• Smedsgaard J , NielsenJ: Metabolite profiling of fungi and yeast: from phenotype to metabolome by MS and informatics.J. Exp. Bot.56(410) , 273–286 (2005).
   PubMed Web of Science ®Google Scholar
• Jewett MC , HofmannG, NielsenJ: Fungal metabolite analysis in genomics and phenomics.Curr. Opin. Biotechnol.17(2) , 191–197 (2006).
   PubMed Web of Science ®Google Scholar
• Karlshoj K , LarsenTO: Differentiation of species from the Penicillium roqueforti group by volatile metabolite profiling.J. Agric. Food Chem.53(3) , 708–715 (2005).
   PubMed Web of Science ®Google Scholar
• Christensen KB , Van Klink JW, Weavers RT, Larsen TO, Andersen B, Phipps RK: Novel chemotaxonomic markers of the Alternaria infectoria species-group. J. Agric. Food Chem.53(24) , 9431–9435 (2005).
   PubMed Web of Science ®Google Scholar
• Parenicova L , SkouboeP, FrisvadJ et al.: Combined molecular and biochemical approach identifies Aspergillus japonicus and Aspergillus aculeatus as two species.Appl. Environ. Microbiol.67(2) , 521–527 (2001).
   PubMed Web of Science ®Google Scholar
• Frisvad JC , SamsonRA: Chemotaxonomy and morphology of Aspergillus fumigatus and related taxa. In:Modern Concepts in Pencillium and Aspergillus Classification. Samson RA, Pitt JI (Eds). Plenum Press, NY, USA, 201–208 (1990).
   Google Scholar
• Millar BC , JiruX, WalkerMJ, EvansJP, MooreJE: False identification of Coccidioides immitis: do molecular methods always get it right?J. Clin. Microbiol.41(12) , 5778–5780 (2003).
   PubMed Web of Science ®Google Scholar
• Rakeman JL , BuiU, LafeK, ChenYC, HoneycuttRJ, CooksonBT: Multilocus DNA sequence comparisons rapidly identify pathogenic molds.J. Clin. Microbiol.43(7) , 3324–3333 (2005).
   PubMed Web of Science ®Google Scholar
• Hall L , WohlfielS, RobertsGD: Experience with the MicroSeq D2 large-subunit ribosomal DNA sequencing kit for identification of filamentous fungi encountered in the clinical laboratory.J. Clin. Microbiol.42(2) , 622–626 (2004).
   PubMed Web of Science ®Google Scholar
• Raoult D , FournierPE, DrancourtM: What does the future hold for clinical microbiology?Nat. Rev. Microbiol.2(2) , 151–159 (2004).
   PubMed Web of Science ®Google Scholar
• Bau M , CastellaG, BragulatMR, Cabanes FJ: DNA-based characterization of ochratoxin-A-producing and non-producing Aspergillus carbonarius strains from grapes. Res. Microbiol.156(3) , 375–381 (2005).
   PubMed Web of Science ®Google Scholar
• Hamari Z , KeveiF, KovacsE, VargaJ, KozakiewiczZ, CroftJH: Molecular and phenotypic characterization of Aspergillus japonicus and Aspergillus aculeatus strains with special regard to their mitochondrial DNA polymorphisms.Antonie Van Leeuwenhoek72(4) , 337–347 (1997).
   PubMed Web of Science ®Google Scholar
• Peterson SW , ItoY, HornBW, GotoT: Aspergillus bombycis, a new aflatoxigenic species and genetic variation in its sibling species,A. nomius. Mycologia93 , 689–703 (2001).
   Web of Science ®Google Scholar
• Serra R , CabanesFJ, PerroneG et al.: Aspergillus ibericus: a new species of section Nigri isolated from grapes.Mycologia98(2) , 295–306 (2006).
   PubMed Web of Science ®Google Scholar
• Diaz MR , BoekhoutT, TheelenB, Bovers M, Cabanes FJ, Fell JW: Microcoding and flow cytometry as a high-throughput fungal identification system for Malassezia species. J. Med. Microbiol.55(Pt 9) , 1197–1209 (2006).
   PubMed Web of Science ®Google Scholar
• Gharizadeh B , NorbergE, LofflerJ et al.: Identification of medically important fungi by the pyrosequencing technology.Mycoses47(1–2) , 29–33 (2004).
   PubMed Web of Science ®Google Scholar
• Klich MA : Identification of clinically relevant aspergilli.Med. Mycol.44(Suppl.) , S127–S131 (2006).
   PubMed Web of Science ®Google Scholar

Websites

• Institutes of the Royal Netherlands Academy of Arts and Sciences www.cbs.knaw.nl
   Google Scholar
• Multi locus sequence typing www.mlst.net
   Google Scholar
• Publicly accessible MLST http://pubmlst.org
   Google Scholar
• The Aspergillus website www.aspergillus.org.uk
   Google Scholar