Long noncoding RNAs expression profile and long noncoding RNA-mediated competing endogenous RNA network in nonobstructive azoospermia patients

References

• Yao C , YuanQ , NiuMet al. Distinct expression profiles and novel targets of micrornas in human spermatogonia, pachytene spermatocytes, and round spermatids between oa patients and noa patients. Mol. Ther. Nucleic Acids9, 182–194 (2017).
   PubMedGoogle Scholar
• Wosnitzer M , GoldsteinM , HardyMP. Review of azoospermia. Spermatogenesis4, e28218 (2014).
   PubMedGoogle Scholar
• Maduro MR , LambDJ. Understanding new genetics of male infertility. J. Urol.168(5), 2197–2205 (2002).
   PubMed Web of Science ®Google Scholar
• Bashamboo A , Ferraz-De-SouzaB , LourencoDet al. Human male infertility associated with mutations in NR5A1 encoding steroidogenic factor 1. Am. J. Hum. Genet.87(4), 505–512 (2010).
   PubMed Web of Science ®Google Scholar
• Hu Z , XiaY , GuoXet al. A genome-wide association study in Chinese men identifies three risk loci for non-obstructive azoospermia. Nat. Genet.44(2), 183–186 (2011).
   PubMed Web of Science ®Google Scholar
• Zhao H , XuJ , ZhangHet al. A genome-wide association study reveals that variants within the HLA region are associated with risk for nonobstructive azoospermia. Am. J. Hum. Genet.90(5), 900–906 (2012).
   PubMed Web of Science ®Google Scholar
• Song WY , MengH , WangXGet al. Reduced microRNA-188-3p expression contributes to apoptosis of spermatogenic cells in patients with azoospermia. Cell Prolif.50(1), e12297 (2017).
   PubMed Web of Science ®Google Scholar
• Tian D , SunS , LeeJT. The long noncoding RNA, Jpx, is a molecular switch for X chromosome inactivation. Cell143(3), 390–403 (2010).
   PubMed Web of Science ®Google Scholar
• Engreitz JM , Pandya-JonesA , McdonelPet al. The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome. Science341(6147), 1237973 (2013).
   PubMed Web of Science ®Google Scholar
• Carrieri C , CimattiL , BiagioliMet al. Long non-coding antisense RNA controls Uchl1 translation through an embedded SINEB2 repeat. Nature491(7424), 454–457 (2012).
   PubMed Web of Science ®Google Scholar
• Gupta RA , ShahN , WangKCet al. Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis. Nature464(7291), 1071–1076 (2010).
   PubMed Web of Science ®Google Scholar
• Yuan JH , YangF , WangFet al. A long noncoding RNA activated by TGF-beta promotes the invasion-metastasis cascade in hepatocellular carcinoma. Cancer Cell25(5), 666–681 (2014).
   PubMed Web of Science ®Google Scholar
• Zhao X , SuL , HeX , ZhaoB , MiaoJ. Long noncoding RNA CA7-4 promotes autophagy and apoptosis via sponging MIR877-3P and MIR5680 in high glucose-induced vascular endothelial cells. Autophagy16(1), 70–85 (2019).
   PubMed Web of Science ®Google Scholar
• Johnsen SG . Testicular biopsy score count--a method for registration of spermatogenesis in human testes: normal values and results in 335 hypogonadal males. Hormones1(1), 2–25 (1970).
   PubMedGoogle Scholar
• Chalmel F , LardenoisA , EvrardBet al. Global human tissue profiling and protein network analysis reveals distinct levels of transcriptional germline-specificity and identifies target genes for male infertility. Hum. Reprod.27(11), 3233–3248 (2012).
   PubMed Web of Science ®Google Scholar
• Spiess AN , FeigC , SchulzeWet al. Cross-platform gene expression signature of human spermatogenic failure reveals inflammatory-like response. Hum. Reprod.22(11), 2936–2946 (2007).
   PubMed Web of Science ®Google Scholar
• Malcher A , RozwadowskaN , StokowyTet al. Potential biomarkers of nonobstructive azoospermia identified in microarray gene expression analysis. Fertil Steril.100(6), 1686–1694 (2013).
   PubMed Web of Science ®Google Scholar
• Ritchie ME , PhipsonB , WuDet al. Limma powers differential expression analyses for RNA-sequencing and microarray studies. Nucleic Acids Res.43(7), e47 (2015).
   PubMed Web of Science ®Google Scholar
• Bo H , LiuZ , TangRet al. Testicular biopsies microarray analysis reveals circRNAs are involved in the pathogenesis of non-obstructive azoospermia. Aging12(3), 2610–2625 (2020).
   PubMedGoogle Scholar
• Zhuang X , LiZ , LinHet al. Integrated miRNA and mRNA expression profiling to identify mRNA targets of dysregulated miRNAs in non-obstructive azoospermia. Sci. Rep.5, 7922 (2015).
   PubMed Web of Science ®Google Scholar
• Zhou Y , ZhouB , PacheLet al. Metascape provides a biologist-oriented resource for the analysis of systems-level datasets. Nat. Commun.10(1), 1523 (2019).
   PubMed Web of Science ®Google Scholar
• Rolland AD , EvrardB , DardeTAet al. RNA profiling of human testicular cells identifies syntenic lncRNAs associated with spermatogenesis. Hum. Reprod.34(7), 1278–1290 (2019).
   PubMed Web of Science ®Google Scholar
• Wen K , YangL , XiongTet al. Critical roles of long noncoding RNAs in Drosophila spermatogenesis. Genome Res.26(9), 1233–1244 (2016).
   PubMed Web of Science ®Google Scholar
• Bao J , WuJ , SchusterAS , HennigGW , YanW. Expression profiling reveals developmentally regulated lncRNA repertoire in the mouse male germline. Biol. Reprod.89(5), 107 (2013).
   PubMed Web of Science ®Google Scholar
• Liang M , LiW , TianHet al. Sequential expression of long noncoding RNA as mRNA gene expression in specific stages of mouse spermatogenesis. Sci. Rep.4, 5966 (2014).
   PubMed Web of Science ®Google Scholar
• Sun J , LinY , WuJ. Long non-coding RNA expression profiling of mouse testis during postnatal development. PLoS ONE8(10), e75750 (2013).
   PubMed Web of Science ®Google Scholar
• Chalmel F , LardenoisA , EvrardBet al. High-resolution profiling of novel transcribed regions during rat spermatogenesis. Biol. Reprod.91(1), 5 (2014).
   PubMed Web of Science ®Google Scholar
• Wichman L , SomasundaramS , BreindelCet al. Dynamic expression of long noncoding RNAs reveals their potential roles in spermatogenesis and fertility. Biol. Reprod.97(2), 313–323 (2017).
   PubMed Web of Science ®Google Scholar
• Jan SZ , VormerTL , JongejanAet al. Unraveling transcriptome dynamics in human spermatogenesis. Development144(20), 3659–3673 (2017).
   PubMed Web of Science ®Google Scholar
• Lu M , TianH , CaoYXet al. Downregulation of miR-320a/383-sponge-like long non-coding RNA NLC1-C (narcolepsy candidate-region 1 genes) is associated with male infertility and promotes testicular embryonal carcinoma cell proliferation. Cell Death Dis.6, e1960 (2015).
   PubMed Web of Science ®Google Scholar
• Vasileva A , TiedauD , FiroozniaA , Muller-ReichertT , JessbergerR. Tdrd6 is required for spermiogenesis, chromatoid body architecture, and regulation of miRNA expression. Curr. Biol.19(8), 630–639 (2009).
   PubMed Web of Science ®Google Scholar
• Akpinar M , LescheM , FanourgakisGet al. TDRD6 mediates early steps of spliceosome maturation in primary spermatocytes. PLoS Genet.13(3), e1006660 (2017).
   PubMed Web of Science ®Google Scholar
• Sha YW , WangX , SuZYet al. TDRD6 is associated with oligoasthenoteratozoospermia by sequencing the patient from a consanguineous family. Gene659, 84–88 (2018).
   PubMed Web of Science ®Google Scholar
• Liu Y , DeboerK , DeKretser DMet al. LRGUK-1 is required for basal body and manchette function during spermatogenesis and male fertility. PLoS Genet.11(3), e1005090 (2015).
   PubMed Web of Science ®Google Scholar
• Atmadibrata B , LiuPY , SokolowskiNet al. The novel long noncoding RNA linc00467 promotes cell survival but is down-regulated by N-Myc. PLoS ONE9(2), e88112 (2014).
   PubMed Web of Science ®Google Scholar
• Cai K , LiT , GuoLet al. Long non-coding RNA LINC00467 regulates hepatocellular carcinoma progression by modulating miR-9-5p/PPARA expression. Open Biol.9(9), 190074 (2019).
   PubMed Web of Science ®Google Scholar