Microarchitectures of Barrett’s Esophagus Associated with DNA Methylation Status

References

• Gavin AT , FrancisciS , FoschiRet al. Oesophageal cancer survival in Europe: a EUROCARE-4 study. Cancer Epidemiol.36(6), 505–512 (2012).
   PubMed Web of Science ®Google Scholar
• Pohl H , WelchHG. The role of overdiagnosis and reclassification in the marked increase of esophageal adenocarcinoma incidence. J. Natl Cancer Inst.97(2), 142–146 (2005).
   PubMed Web of Science ®Google Scholar
• Everhart JE , RuhlCE. Burden of digestive diseases in the United States part I: overall and upper gastrointestinal diseases. Gastroenterology136(2), 376–386 (2009).
   PubMed Web of Science ®Google Scholar
• Tachimori Y , OzawaS , NumasakiHet al. Comprehensive Registry of Esophageal Cancer in Japan, 2006. Esophagus11, 21–47 (2014).
   Web of Science ®Google Scholar
• Masuda M , KuwanoH , OkumuraMet al. Thoracic and cardiovascular surgery in Japan during 2012: annual report by The Japanese Association for Thoracic Surgery. Gen. Thorac. Cardiovasc. Surg.62(12), 734–764 (2014).
   PubMedGoogle Scholar
• Spechler SJ , GoyalRK. Barrett’s esophagus. N. Engl. J. Med.315(6), 362–371 (1986).
   PubMed Web of Science ®Google Scholar
• Barrett NR . The lower esophagus lined by columnar epithelium. Surgery41(6), 881–894 (1957).
   PubMed Web of Science ®Google Scholar
• Caygill CP , RoystonC , CharlettAet al. Mortality in Barrett’s esophagus: three decades of experience at a single center. Endoscopy44(10), 892–898 (2012).
   PubMedGoogle Scholar
• Jones PA , BaylinSB. The epigenomics of cancer. Cell128(4), 683–692 (2007).
   PubMed Web of Science ®Google Scholar
• Issa JP . Aging and epigenetic drift: a vicious cycle. J. Clin. Invest.124(1), 24–29 (2014).
   PubMed Web of Science ®Google Scholar
• Jammula S , Katz-SummercornAC , LiXet al. Identification of subtypes of Barrett’s esophagus and esophageal adenocarcinoma based on DNA methylation profiles and integration of transcriptome and genome data. Gastroenterology158(6), 1682–1697 (2020).
   PubMed Web of Science ®Google Scholar
• Yu M , MadenSK , StachlerMet al. Subtypes of Barrett’s oesophagus and oesophageal adenocarcinoma based on genome-wide methylation analysis. Gut68(3), 389–399 (2019).
   PubMed Web of Science ®Google Scholar
• Yamashita N , MinamotoT , OchiaiAet al. Frequent and characteristic K-ras activation and absence of p53 protein accumulation in aberrant crypt foci of the colon. Gastroenterology108(2), 434–440 (1995).
   PubMed Web of Science ®Google Scholar
• Tahara T , ArisawaT. DNA methylation as a molecular biomarker in gastric cancer. Epigenomics7(3), 475–486 (2015).
   PubMed Web of Science ®Google Scholar
• Tahara T , YamazakiJ , TaharaSet al. Magnifying narrow-band imaging of gastric mucosal morphology predicts the H. pylori-related epigenetic field defect. Sci. Rep.7(1), 3090 (2017).
   PubMedGoogle Scholar
• Tahara S , TaharaT , TuskamotoTet al. Morphologic characterization of residual DNA methylation in the gastric mucosa after Helicobacter pylori eradication. Cancer Med.6(7), 1730–1737 (2017).
   PubMed Web of Science ®Google Scholar
• Goda K , TajiriH , IkegamiMet al. Usefulness of magnifying endoscopy with narrow-band imaging for the detection of specialized intestinal metaplasia in columnar-lined esophagus and Barrett’s adenocarcinoma. Gastrointest. Endosc.65(1), 36–46 (2007).
   PubMed Web of Science ®Google Scholar
• Sharma P , BansalA , MathurSet al. The utility of a novel narrow band imaging endoscopy system in patients with Barrett’s esophagus. Gastrointest. Endosc.64(2), 167–175 (2006).
   PubMed Web of Science ®Google Scholar
• Nakayoshi T , TajiriH , MatsudaKet al. Magnifying endoscopy combined with narrow band imaging system for early gastric cancer: correlation of vascular pattern with histopathology (including video). Endoscopy36(12), 1080–1084 (2004).
   PubMed Web of Science ®Google Scholar
• Machida H , SanoY , HamamotoYet al. Narrow-band imaging in the diagnosis of colorectal mucosal lesions: a pilot study. Endoscopy36(12), 1094–1098 (2004).
   PubMed Web of Science ®Google Scholar
• Armstrong D , BennettJR , BlumALet al. The endoscopic assessment of esophagitis, a progress report on observer agreement. Gastroenterology111(1), 85–92 (1996).
   PubMed Web of Science ®Google Scholar
• Kimura K , TakemotoT. An endoscopic recognition of atrophic border and its significance in chronic gastritis. Endoscopy1(3), 87–97 (1969).
   Google Scholar
• Shijimaya T , TaharaT , YamazakiJet al. Comprehensive DNA methylation profiling of Barrett’s esophagus and esophageal adenocarcinoma in Japanese patients. Mol. Carcinog.62(8), 1191–1200 (2023).
   PubMed Web of Science ®Google Scholar
• Asada K , NakajimaT , ShimazuTet al. Demonstration of the usefulness of epigenetic cancer risk prediction by a multicentre prospective cohort study. Gut64(3), 388–396 (2015).
   PubMed Web of Science ®Google Scholar
• Toiyama Y , OkugawaY , TanakaKet al. A panel of methylated microRNA biomarkers for identifying high-risk patients with ulcerative colitis-associated colorectal cancer. Gastroenterology153(6), 1634–1646.e8 (2017).
   PubMed Web of Science ®Google Scholar
• Suzuki R , YamamotoE , NojimaMet al. Aberrant methylation of microRNA-34b/c is a predictive marker of metachronous gastric cancer risk. J. Gastroenterol.49(7), 1135–1144 (2014).
   PubMed Web of Science ®Google Scholar
• Ueda Y , AndoT , NanjoSet al. DNA methylation of microRNA-124a is a potential risk marker of colitis-associated cancer in patients with ulcerative colitis. Dig. Dis. Sci.59(10), 2444–2451 (2014).
   PubMed Web of Science ®Google Scholar
• Chung W , Kwabi-AddoB , IttmannMet al. Identification of novel tumor markers in prostate, colon and breast cancer by unbiased methylation profiling. PLOS ONE3(4), e2079 (2008).
   PubMed Web of Science ®Google Scholar
• Shen L , ToyotaM , KondoYet al. Integrated genetic and epigenetic analysis identifies three different subclasses of colon cancer. Proc. Natl Acad. Sci. USA104(47), 18654–18659 (2007).
   PubMed Web of Science ®Google Scholar
• Spechler SJ , SharmaP , SouzaRFet al. American Gastroenterological Association technical review on the management of Barrett’s esophagus. Gastroenterology140(3), e18–52 (2011).
   PubMed Web of Science ®Google Scholar
• Shaheen NJ , FalkGW , IyerPGet al. American College of Gastroenterology. ACG Clinical Guideline: Diagnosis and Management of Barrett’s Esophagus. Am. J. Gastroenterol.111(1), 30–50 (2016).
   PubMed Web of Science ®Google Scholar
• Chandrasekar VT , HamadeN , DesaiMet al. Significantly lower annual rates of neoplastic progression in short- compared to long-segment non-dysplastic Barrett’s esophagus: a systematic review and meta-analysis. Endoscopy51(7), 665–672 (2019).
   PubMed Web of Science ®Google Scholar
• Andrici J , TioM , CoxMR , EslickGD. Hiatal hernia and the risk of Barrett’s esophagus.J. Gastroenterol. Hepatol.28(3), 415–431 (2013).
   PubMed Web of Science ®Google Scholar
• Kimura T , YamamotoE , YamanoHet al. A novel pit pattern identifies the precursor of colorectal cancer derived from sessile serrated adenoma. Am. J. Gastroenterol.107(3), 460–469 (2012).
   PubMed Web of Science ®Google Scholar
• Goda K , FujisakiJ , IshiharaRet al. Newly developed magnifying endoscopic classification of the Japan Esophageal Society to identify superficial Barrett’s esophagus-related neoplasms. Esophagus15(3), 153–159 (2018).
   PubMed Web of Science ®Google Scholar