85
Views
0
CrossRef citations to date
0
Altmetric
Special Report

Novel Tools for Unbiased Dna Differential Methylation Screening

, , , &
Pages 325-333 | Published online: 14 Apr 2010

Bibliography

  • Esteller M : DNA Methylation: Approaches, Methods and Applications. CRC Press, FL, USA, 73–212 (2005).
  • Zuo T , TyckoB, Liu T-M, Lin H-JL, Huang TH-M: Methods in DNA methylation profiling. Epigenomics1(2) , 331–345 (2009).
  • Hamada T , MurasawaS, AsaharaT: Simple screening method for differentially methylated regions of the genome using a small number of cells.Biochem. Biophys. Res. Commun.353(2) , 275–279 (2007).
  • Chango A , Abdennebi-NajarL, TessierFet al.: Quantitative methylation-sensitive arbitrarily primed PCR method to determine differential genomic DNA methylation in Down Syndrome.Biochem. Biophys. Res. Commun.349(2) , 492–496 (2006).
  • Matsuyama T , KimuraMT, KoikeKet al.: Global methylation screening in the Arabidopsis thaliana and Mus musculus genome: applications of virtual image restriction landmark genomic scanning (Vi-RLGS).Nucleic Acids Res.31 , 4490–4496 (2003).
  • Phillips JM , GoodmanJI: Identification of genes that may play critical roles in phenobarbital (PB)-induced liver tumorigenesis due to altered DNA methylation.Toxicol. Sci.104 , 86–99 (2008).
  • Bock C : Epigenetic biomarker development.Epigenomics1(1) , 99–110 (2009).
  • Kuznetsova EB , KekeevaTV, LarinSSet al.: [Novel methylation and expression markers associated with breast cancer].Mol. Biol. (Mosk.)41(4) , 624–633 (2007).
  • Lodygin D , EpanchintsevA, MenssenA, DieboldJ, HermekingH: Functional epigenomics identifies genes frequently silenced in prostate cancer.Cancer Res.65 , 4218–4227 (2005).
  • Kuznetsova EB , KekeevaTV, LarinSSet al.: Methylation of the BIN1 gene promoter CpG island associated with breast and prostate cancer.J. Carcinog.6 , 9 (2007).
  • Zemliakova VV , Strel‘nikovVV, ZborovskaiaIBet al.: [Abnormal methylation of p16/CDKN2A AND p14/ARF genes GpG Islands in non-small cell lung cancer and in acute lymphoblastic leukaemia].Mol. Biol. (Mosk.)38(6) , 966–972 (2004).
  • Ushijima T : Detection and interpretation of altered methylation patterns in cancer cells.Nat. Rev. Cancer5(3) , 223–231 (2005).
  • Frigola J , RibasM, RisquesR, PeinadoMA: Methylome profiling of cancer cells by amplification of inter-methylated sites (AIMS).Nucleic Acids Res.30(7) , E28 (2002).
  • Tanas AS , ShkarupoVV, KuznetsovaEB, ZaletaevDV, StrelnikovVV: Amplification of intermethylated sites experimental design and results analysis with AIMS in silico computer software.Mol. Biol. (Mosk.)44(2) , 317–325 (2010).
  • Rodriguez J , VivesL, JordàMet al.: Genome-wide tracking of unmethylated DNA Alu repeats in normal and cancer cells.Nucleic Acids Res.36 , 770–784 (2008).
  • Brown CG : The DNA sequencing renaissance and its implications for epigenomics.Epigenomics1(1) , 5–8 (2009).
  • Frigola J , SoléX, PazMFet al.: Differential DNA hypermethylation and hypomethylation signatures in colorectal cancer.Hum. Mol. Genet.14 , 319–326 (2005).

▪ Websites

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.