MIRs are Present in Coding Regions of Human Genes

References

• Altshul S. F., Gish W., Miller W., Myers E. W., Lipman D. J. Basic local alignment search tool. J. Mol. Biol. 1990; 215: 403–410
   PubMed Web of Science ®Google Scholar
• Bach A. W., Lan N. C, Johnson D. L., Abell C. W., Bembenek M. E., Kwan S. W., Seeburg P. H., Shin J. C. cDNA cloning of human liver monoamine oxidase A and B: molecular basis of differences in enzymatic properties. Proc. Nat. Acad. Sci. USA 1988; 85: 4934–4938
   PubMed Web of Science ®Google Scholar
• Bonham K., Fujita D. J. Organization and analysis of the promoter region and 5′ non-coding exons of the human c-src proto-oncogene. Oncogene 1993; 8: 1973–1981
   PubMedGoogle Scholar
• Burt D. W., Dey B. R., Paton I. R., Morrice D. R., Law A. S. The chicken transforming growth factor-beta 3 gene: genomic structure, transcriptional analysis, and chromosomal location. DNA Cell Biol 1995; 14: 111–123
   PubMedGoogle Scholar
• Casey J. R., Petranka J. G., Kottra J., Fleenor D. E., Rosse W. F. The structure of the urokinase-type plasminogen activator receptor gene. Blood 1994; 84: 1151–1156
   PubMedGoogle Scholar
• Church R. L., Wang J. H. The human lens fiber-cell intrinsic membrane protein MP19 gene: isolation and sequence analysis. Curt. Eye. Res. 1993; 12: 1057–1065
   PubMed Web of Science ®Google Scholar
• Cooper D. A., Lu S. C, Viswanath R., Freiman R. N., Bensadoun A. The structure and complete nucleotide sequence of the avian lipoprotein lipase gene. Biochim. Biophys. Acta 1992; 1129: 166–171
   PubMed Web of Science ®Google Scholar
• Degen S. J., Davie E. W. Nucleotide sequence of the gene for human prothrombin. Biochemistry 1987; 26: 6165–6167
   PubMed Web of Science ®Google Scholar
• Donehower L. A., Slagle B. L., Wilde M., Daglington G., Buted J. S. Identification of a conserved sequence in the non-coding regions of many human genes. Nucl. Acids Res. 1989; 17: 699–722
   PubMed Web of Science ®Google Scholar
• Grimsby J., Chen K., Wang L. J., Lan N. C., Shih J. C. Human monoamine oxidase A and B genes exhibit identical exon-intron organization. Proc. Nat. Acad. Sci. USA, 88: 3637–3641
   PubMedGoogle Scholar
• Jurka J., Zietkiewicz E., Labuda D. Ubiquitous mammalian-wide interspersed repeats (MIRs) are molecular fossils from the mesozoic era. Nucl. Acids Res. 1995; 23: 170–175
   PubMed Web of Science ®Google Scholar
• Kobayashi K., Kurosawa Y., Fukita K., Nagatsu T. Human dopamine B-hydroxylase gene; two mRNA types having different 3′ terminal regions are prodused through alternative polyadenylation. Nucleic Acids Res. 1989; 17: 1089–1102
   PubMed Web of Science ®Google Scholar
• Korotkov E. V. Family of mirror-reflected Bl like sequences in human clones. Dokl. Akad. Nauk SSSR. 1990; 311: 238–242
   PubMedGoogle Scholar
• Korotkov E. V. New family of wide-spread MB1 repeats in human genome. Mol. Biol. ÿ5 ÿO(Russian) 1991; 25: 250–263
   PubMedGoogle Scholar
• Korotkov E. V. MB1 repeats in genomes of some mammals. Izvestia Akad. Nauk SSSR. Biological seria. 1992, 4: 660–672
   Google Scholar
• Korotkov E. V. Fast method of purine-pirimidine relation search between DNA sequences. DNA Sequence 1994; 4: 411–413
   Google Scholar
• Korotkov E. V., Korotkova M. A. Enlarged similarity of DNA sequences. DNA Research 1996; 3: 157–164
   PubMedGoogle Scholar
• Kraft H. J., Hendriks W., de Jong W. W., Lubsen N. H., Schoenmakers J. G. Duck lactate dehydrogenase B/epsilon-crystallin gene. Lens recruitment of a GC-promoter. J. Mol. Biol 1993; 229: 849–859
   PubMedGoogle Scholar
• Kullback S. Information theory and statistics. John Wiley and Sons, Inc. Press, New-York 1959
   Google Scholar
• Kasturi R., Pazirandeh Wakil S. J. Characterization of a genomic and cDNA clone coding for the thioesterase domain and 3′ non-coding region of the chicken liver fatty acid synthase gene. Biochemistry 1988; 27: 7778–7785
   PubMedGoogle Scholar
• Maraia R. J. Molecular intelligence unit in the impact of short interspersed elements (SINES) on the host genome. Springer-Verlag, Germany 1995
   Google Scholar
• Nagahashi S., Endoh H., Suzuki Y., Okada N. Characterization of a tandemly repeated DNA sequence family originally derived by retroposition of tRNA-Glu in the newt. J. Mol. Biol 1991; 222: 391–404
   PubMed Web of Science ®Google Scholar
• Nolan K. F., Kaluz S., Higgins J. M., Goundis D., Reid K. B. Characterisation of the human properdin gene. Biochem. J. 1992; 287: 291–297
   PubMed Web of Science ®Google Scholar
• Pearson W. R., Lipman D. J. Improved tolls for biological sequences comparison. Proc. Natl. Acad. Sci. USA 1988; 85: 2444–2448
   PubMed Web of Science ®Google Scholar
• Roberts W. M., Look A. T., Roussel M. F., Sherr C. J. Tandem linkage of human CSF-1 receptor (c-fms) and Pdgf receptor genes. Cell 1988; 55: 655–661
   PubMed Web of Science ®Google Scholar
• Rosati M., Marino M., Franze A., Tramontano A., Grimaldi G. Members of the zinc finger protein gene family sharing a conserved N-Terminal module. Nucleic Acids Res. 1991; 19: 5661–5667
   PubMedGoogle Scholar
• Sahr K. E., Taylor W. M., Daniels B. P., Rubin H. L., Jarolim P. The structure and organisation of the human erythroid anion exchanger (AE1) gene, (Unpublished)
   Google Scholar
• Shaw D. J., McCurrach M., Rundle S. A., Harley H. G., Crow S. R., Sohn R., Thition J. P., Harper P. S., Housman D. E., Brook J. D. Genomic organisation and transcriptional units at the myotonic dystrophy locus. Genomics 1993; 18: 673–679
   PubMedGoogle Scholar
• Seibold A., Brabet P., Rosental W., Birnbaumer M. Structure and chromosomal localization of the human antidiuretic hormone receptor gene. Am. J. Hum. Genet. 1992; 51: 1078–1083
   PubMed Web of Science ®Google Scholar
• Steenbergh P. H., Koonen-Reemst A. M. C. B., Cleutjens C. B. J. M., Susenbach J. S. Complete nucleotide sequence of the high molecular weight human IGF-I mRNA. Biochem. Biophys. Res. Commun. 1991; 175: 507–514
   PubMed Web of Science ®Google Scholar
• Smit A. F. A., Riggs A. D. MIRs are classic tRNA-derived SINEs that amplified before the mammalian radiation. Nucl. Acids Res. 1995; 23: 98–102
   PubMedGoogle Scholar
• Wildin R. S., Antush M. J., Bennet R. L., Scott C. R. Heterogeneus AVPR2 gene mutations in congenital nephrogenic diabetes insipidus. Am. J. Hum. Genet. 1994; 55: 266–277
   PubMedGoogle Scholar
• Wirz T., Braendle U., Soldati T., Hossle J. P., Perriard J. C. A unique chicken B-creatine kinase gene gives rise to two B-creatine kinase isoproteins with distinct N-termini by alternative splicing. J. Bio Chem. 1990; 265: 11656–11666
   PubMedGoogle Scholar