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Original Articles

Phylogenetic relationship of the coelomycete genus Infundibulomyces based on nuclear rDNA data

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Pages 735-741 | Accepted 23 Jun 2008, Published online: 20 Jan 2017

LITERATURE CITED

  • Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J Mol Bio 215:403–410.
  • Bunyard BA, Nicholson MS, Royse DJ. 1994. A systematic assessment of Morchella using RFLP analysis of the 28S ribosomal RNA gene. Mycologia 86:762–772.
  • Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783–791.
  • Fernández FA, Huhndorf SM. 2005. New species of Chaetosphaeria, Melanopsammella and Tainosphaeria gen. nov. from the Americas. Fung Divers 18:15–57.
  • ———, Miller AN, Huhndorf SM, Lutzoni FM, Zoller S. 2006. Systematics of the genus Chaetosphaeria and its allied genera: morphological and phylogenetic diversity in north temperate and neotropical taxa. Mycologia 98:122–123.
  • Gams W, Holubová-Jechová V. 1976. Chloridium and some other dematiaceous hyphomycetes growing on decaying wood. Stud Mycol 13:1–99.
  • Hall T. 2006. Bioedit 7.0.5.3. Department of Microbiology, North Carolina State University. (Online) Available: http://www.mbio.ncsu.edu/BioEdit/Bioedit.html [Accessed 2 Mar 2006]
  • Huelsenbeck JP, Ronquist F. 2001. MrBayes: Bayesian inference of phylogenetic diversities. Bioinformatics (Oxford) 17:754–755.
  • Huhndorf SM, Miller AN, Fernández FA. 2004. Molecular systematics of the Sordariales: the order and the family Lasiosphaeriaceae redefined. Mycologia 95:368–387.
  • Kirk PM, Cannon PF, David JC, Stalpers JA. 2001. Anisworth & Bisby’s Dictionary of the Fungi. UK: CAB International. 655 p.
  • Landvik S. 1996. Neolecta, a fruiting-body-producing genus of the basal ascomycetes, as shown by SSU and LSU rDNA sequences. Mycol Res 100:1727–1740.
  • Nag Raj TR. 1993. Coelomycetous anamorphs with appendages-bearing conidia. Waterloo, Ontario, Canada: MycologuePUBLICations. 1101 p.
  • O’Donnell K, Cigelnik E, Weber NS, Trappe JM. 1997. Phylogenetic relationship among ascomycetous truffles and the true and false morels inferred from 18S and 28S ribosomal DNA sequence analysis. Mycologia 89: 48–65.
  • Plaingam N, Somrithipol S, Jones EBG. 2003. Infundibulomyces: a new genus of Coelomycetes from Thailand. Can J Bot 81:732–737.
  • ———, ———, ———. 2004. Coelomycete. In: Jones EBG, Tantichareon M, Hyde KD, eds. Thai fungal diversity. Bangkok: National Center for Genetic Engineering and Biotechnology (BIOTEC). p 61–69.
  • Réblová M, Winka K. 2000. Phylogeny of Chaetosphaeria and its anamorphs based on morphological and molecular data. Mycologia 92:939–954.
  • Spatafora JW, Sung GH, Johnson D, Hesse C, O’Rourke B, Serdani M, Spotts R, Lutzoni F, Hofstetter V, Miadlikowska J, Reeb V, Gueidan C, Fraker E, Lumbsch T, Lücking R, Schmitt I, Hosaka K, Aptroot A, Roux C, Miller AN, Geiser DM, Hafellner J, Hestmark G, Arnold AE, Büdel B, Rauhut A, Hewitt D, Untereiner WA, Cole MS, Scheidegger C, Schultz M, Sipman H, Schoch CL. 2006. A five-gene phylogeny of Pezizomycotina. Mycologia 98:1018–1028.
  • Sutton BC. 1975. Eucalyptus microfungi, Satchmopsis gen. nov., a new species of Coniella, Coniothyrium and Harknessia. Nov Hedwig 26:1–16.
  • ———. 1980. The Coelomycetes: fungi imperfecti with pycnidia, acervuli and stroma. Kew, UK: Commonwealth Mycological Institute. 696 p.
  • Swofford DL. 2002. PAUP*: phylogenetic analysis using parsimony (*and other methods). Version 4.0b10. Sunderland, Massachusetts: Sinauer Associates.
  • Thompson JD, Higgins DG, Gibson TJ. 1994. Clustal W improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acid Res 22:4673–4680.
  • White TF, Bruns T, Lee S, Taylor J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky FS, White TT, eds. PCR protocols: a guide to methods and applications. San Diego: Academic Press. p 315–322.
  • Zhang N, Castlebury LA, Miller AN, Huhndorf SM, Schoch CL, Seifert KA, Rossman AY, Rogers JD, Kohlmeyer J, Volkmann-Kohlmeyer B, Sung GH. 2006. An overview of the systematics of the Sordariomycetes based on a four-gene phylogeny. Mycologia 98:1076–87.

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