Literature cited
- AltschulSFGishWMillerWMyersEWLipmanDJ. 1990. Basic local alignment search tool. J Mol Biol 215:403–410, doi:10.1016/S0022-2836(05)80360-2
- AlvaradoPMorenoGManjónJL. 2012. Comparison between Tuber gennadii and T. oligospermum lineages reveals the existence of the new species T. cistophilum (Tuberaceae, Pezizales). Mycologia 104:894–910, doi:10.3852/11-254
- AmmiratiJParkerADMathenyPB. 2007. Cleistocybe, a new genus of Agaricales. Mycoscience 48:282–289, doi:10.1007/S10267-007-0365-5
- BessonM. 1970. Ultrastructure de la paroi sporique de quelques Agaricales à ornements cyanophiles non amyloïdes. CR Acad Sci sér. D 271:1508–1510.
- BigelowHE. 1976. Studies on some lignicolous Clitocybes. Memoirs of the New York Botanical Garden. 28:9–15.
- BigelowHE. 1981. Spore ornamentation in the Tricholomataceae I. Mycologia 73:128–140, doi:10.2307/3759629
- BigelowHE. 1982. North American species of Clitocybe I. Beih Nova Hedwigia 72:1–280.
- BigelowHEHeslerLR. 1960. Clitocybe in Tennessee and North Carolina. J Elisha Mitchell Sci Soc 76:155–167.
- BigelowHESmithAH. 1969. The status of Lepista—A new section of Clitocybe. Brittonia 21:144–147, doi:10.2307/2805523
- BinderMLarssonK-HMathenyPBHibbettDS. 2010. Amylocorticiales ord. nov. and Jaapiales ord. nov.: early diverging clades of Agaricomycetidae were dominated by corticioid forms. Mycologia 102:865–880, doi:10.3852/09-288
- BohusG. 1979. Some results of systematical and ecological research on Agaricales VII. Studia Bot Hung 13:19–27.
- BonM. 1983. Tricholomataceae de France et d’Europe Occidentale (6 ème partie: tribu Clitocybeae Fay.) Clé monographique. Doc Mycol 13:1–53.
- BonM. 1997. Les Clitocybes, Omphales et ressemblants. Flore Mycologique d’Europe. Doc Mycol, Mémoires hors série n° 4. St Valéry-sur-Somme. 181 p.
- BonM. 1999. Les Collybio-marasmioïdes et ressemblants. Flore Mycologique d’Europe. Doc Mycol, Mémoires hors série n° 5. St Valéry-sur-Somme. 171 p.
- CastresanaJ. 2000. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol Biol Evol 17:540–552, doi:10.1093/oxfordjournals.molbev.a026334
- ClémençonH. 1984. Kompendium der Blätterpilze. Clitocybe. Beih Z Mykol 5:59–68.
- ConsiglioGContuM. 2003. Il genere Lepista (Fr.) W.G. Sm. in Italia. Riv Mic 2:131–176.
- CubetaMAEchandiEAbernethyTVilgalysR. 1991. Characterization of anastomosis groups of binucleate Rhizoctonia species using restriction analysis of an amplified ribosomal RNA gene. Phytopathology 81: 1395–1400, doi:10.1094/Phyto-81-1395
- DonkMA. 1949. Nomenclatural notes on generic names of agarics (Fungi: Agaricales). Bull Jard Bot Buitenzorg sér 3, 18:271–402.
- Esteve-RaventósFVillarrealM. 2000. Type study of Lepista rickenii (Tricholomatales) and description of L. panaeolus var. paxilloides var. nov. Mycotaxon 76: 399–409.
- FriesEM. 1821. Systema Mycologicum I. Lund. 520 p.
- FriesEM. 1836–1838. Epicrisis systematis mycologici: seu synopsis Hymenomycetum. Upsaliæ. 612 p.
- GardesMBrunsTD. 1993. ITS primers with enhanced specificity for basidiomycetes—application to the identification of mycorrhizae and rusts. Mol Ecol 2:113–118, doi:10.1111/j.1365-294X.1993.tb00005.x
- GarnicaSWeissMWaltherGOberwinklerF. 2007. Reconstructing the evolution of agarics from nuclear gene sequences and basidiospore ultrastructure. Mycol Res 111:1019–1029, doi:10.1016/j.mycres.2007.03.019
- GemlJTimlingIRobinsonCHLennonNNusbaumHCBrochmannCNoordeloosMETaylorDL. 2012. An arctic community of symbiotic fungi assembled by long-distance dispersers: phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA. J Biogeogr 39:74–88, doi:10.1111/j.1365-2699.2011.02588.x
- GilletC-C. 1874–1893. Les Hyménomycètes ou description de tous les champignons qui croissent en France avec l’indication de leur propriétés utiles ou vénéneuses. Alençon, France. 825 p.
- GuldenG. 1983. Studies in Lepista (Fr.) W.G. Smith section Lepista (Basidiomycotina, Agaricales). Sydowia 36:59–74.
- HarmajaH. 1969. The genus Clitocybe (Agaricales) in Fennoscandia. Karstenia 10:5–121.
- HarmajaH. 2003. Notes on Clitocybe s. lato (Agaricales). Ann Bot Fennici 40:213–218.
- HeykoopM. 1995. Notas nomenclaturales y taxonómicas en Agaricales II. Bol Sociedad Micol Madrid. 20:157–166.
- HofstetterVClémençonHVilgalysRMoncalvoJM. 2002. Phylogenetic analyses of the Lyophylleae (Agaricales, Basidiomycota) based on nuclear and mitochondrial rDNA sequences. Mycol Res 106:1043–1059, doi:10.1017/S095375620200641X
- HughesKWPetersenRHJohnsonJEMoncalvoJ-MVilgalysRRedheadSAThomasTMcGheeLL. 2001. Infrageneric phylogeny of Collybia s. str. based on sequences of the ribosomal ITS and LSU regions. Mycol Res 105:164–172, doi:10.1017/S0953756200003415
- JosserandMPouchetA. 1954. Clitocybe rhizophora au sens des auteurs français n’est pas l’espece de Velenovsky et doit changer de nom. Bull Soc Linn Lyon 23:25–29.
- KummerP. 1871. Der Führer in die Pilzkunde. LuppeE., ed. Zerbst, Germany. 146 p.
- KuyperTW. 1995. Clitocybe (Fr.) Staude. In: BasCKuyperTWNoordeloosMEVellingaEC, eds. Flora Agaricina Neerlandica 3. Rotterdam, the Netherlands: A.A. Balkema. p 42–62.
- LiuYJWhelenSHallBD. 1999. Phylogenetic relationships among Ascomycetes: evidence from an RNA polymerase II subunit. Mol Biol Evol 16:1799–1808, doi:10.1093/oxfordjournals.molbev.a026092
- LundellS. 1937. Three undescribed vernal agarics, Mycena vernalis H, v. Post in Shed., Clitocybe verna Egeland in Sched. and Entoloma vernum. Svensk Bot Tidskr 31: 186–195.
- LutzoniFM. 1997. Phylogeny of lichen- and non-lichenforming omphalinoid mushrooms and the utility of testing for combinability among multiple datasets. Syst Biol 46:373–406, doi:10.1093/sysbio/46.3.373
- MathenyPB. 2005. Improving phylogenetic inference of mushrooms with RPB1 and RPB2 nucleotide sequences (Inocybe; Agaricales). Mol Phylogen Evol 35:1–20, doi:10.1016/j.ympev.2004.11.014
- MathenyPBCurtisJMHofstetterVAimeMCMoncalvoJ-Met al. 2006. Major clades of Agaricales: a multilocus phylogenetic overview. Mycologia 98:982–995, doi:10.3852/mycologia.98.6.982
- MathenyPBWangZBinderMCurtisJMLimYWNilssonRHet al. 2007. Contributions of rpb2 and tef1 to the phylogeny of mushrooms and allies (Basidiomycota, Fungi). Mol Phylogen Evol 43:430–451, doi:10.1016/j.ympev.2006.08.024
- MoncalvoJ-MLutzoniFMRehnerSAJohnsonJVilgalysR. 2000. Phylogenetic relationships of agaric fungi based on nuclear large subunit ribosomal DNA sequences. Syst Biol 49:278–305, doi:10.1093/sysbio/49.2.278
- MoncalvoJ-MVilgalysRRedheadSJohnsonJEJamesTYet al. 2002. One hundred seventeen clades of euagarics. Mol Phylogen Evol 23:357–400, doi:10.1016/S1055-7903(02)00027-1
- NylanderJAA. 2004. MrModeltest 2. Program distributed by the author. Uppsala, Evolutionary Biology Centre, Uppsala University.
- OsmundsonTWRobertVASchochCLBakerLJSmithARobichGMizzanLGarbelottoMM. 2013. Filling gaps in biodiversity knowledge for macrofungi: contributions and assessment of an herbarium collection DNA barcode sequencing project. PLoS ONE 8:e62419, doi:10.1371/journal.pone.0062419
- OvreboCLLodgeDJAimeMC. 2011. A new Cantharocybe from Belize with notes on the type of Cantharocybe gruberi. Mycologia 103:1102–1109, doi:10.3852/10-360
- PeintnerUBougherNLCastellanoMAMoncalvoJ-MMoserMMTrappeJMVilgalysR. 2001. Multiple origins of sequestrate fungi related to Cortinarius (Cortinariaceae). Am J Bot 88:2168–2179, doi:10.2307/3558378
- PersoonCH. 1801. Synopsis Methodica Fungorum 2. DieterichH, ed. Göttingen, Germany, 346 p.
- RedheadSAAmmiratiJFNorvellLLSeidlMT. 2000. Notes on western North American snowbank fungi. Mycotaxon 76:321–328.
- RedheadSALutzoniFMoncalvoJMVilgalysR. 2002. Phylogeny of agarics: partial systematics solutions for core omphalinoid genera in the Agaricales (euagarics). Mycotaxon 83:19–57.
- RehnerSABuckleyE. 2005. A Beauveria phylogeny inferred from nuclear ITS and EF1-a sequences: evidence for cryptic diversification and links to Cordyceps teleomorphs. Mycologia 97:84–98, doi:10.3852/mycologia.97.1.84
- RonquistFHuelsenbeckJP. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–1574, doi:10.1093/bioinformatics/btg180
- SchumacherCF. 1803. Enumeratio plantarum in partibus Sællandiæ septentrionalis et orientalis. Pars posterior (Cryptogams). Hafnia. 489 p.
- SingerR. 1986. The Agaricales in modern taxonomy. 4th ed. Koenigstein, Germany: Koeltz Scientific Books. 981 p.
- SowerbyJ. 1803. Colored figures of English fungi or mushrooms 3. London: J. Davis. 322 pl.
- StamatakisA. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22:2688–2690, doi:10.1093/bioinformatics/btl446
- SwoffordDL. 2001. PAUP* 4.0b10: phylogenetic analysis using parsimony (*and other methods). Sunderland, Massachusetts: Sinauer Associates.
- TakahashiH. 2003. New species of Clitocybe and Crepidotus (Agaricales) from eastern Honshu, Japan. Mycoscience 44:103–107, doi:10.1007/S10267-003-0091-6
- TamuraKPetersonDPetersonNStecherGNeiMKumarS. 2011. MEGA 5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance and maximum parsimony methods. Mol Biol Evol 28:2731–2739, doi:10.1093/molbev/msr121
- van TuinenDZhaoBGianinazzi-PearsonV. 1998. PCR in studies of AM fungi: from studies to application. In: VarmaA, ed. Mycorrhiza manual. Berlin: Springer. p 387–400.
- VilgalysRHesterM. 1990. Rapid genetic identification and mapping of enzymatically ampliWed ribosomal DNA from several Cryptococcus species. J Bacteriol 172:4238–4246.
- VizziniAContuMErcoleE. 2011. Musumecia gen. nov. in the Tricholomatoid clade (Basidiomycota, Agaricales) related to Pseudoclitocybe. Nord J Bot 29:1–7, doi:10.1111/j.1756-1051.2011.01169.x
- VizziniAErcoleE. 2012. Paralepistopsis gen. nov. and Paralepista (Basidiomycota, Agaricales). Mycotaxon 120:253–267, doi:10.5248/120.253
- VizziniAMusumeciEMuratC. 2010. Trichocybe, a new genus for Clitocybe puberula (Agaricomycetes, Agaricales). Fungal Divers 42:97–105, doi:10.1007/s13225-010-0030-8
- WaltherGGarnicaSWeißM. 2005. The systematic relevance of conidiogenesis modes in the gilled Agaricales. Mycol Res 109:525–544, doi:10.1017/S0953756205002868
- WhiteTJBrunsTLeeSTaylorJW. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, eds. PCR protocols: a guide to methods and applications. New York: Academic Press Inc. p 315–322.