85
Views
1
CrossRef citations to date
0
Altmetric
Original Articles

Exploring the phylogenetic affiliations and the trophic mode of Sedecula pulvinata (Sedeculaceae)

, &
Pages 688-696 | Received 01 May 2014, Accepted 02 Feb 2015, Published online: 20 Jan 2017

Literature cited

  • AgererR. 1999. Never change a functionally successful principle: the evolution of Boletales s.l. (Hymenomycetes, Basidiomycota) as seen from below-ground features. Sendtnera 6:5–91.
  • BarroetaveñaCCázaresERajchenbergM. 2007. Ectomycorrhizal fungi associated with ponderosa pine and Douglas-fir: a comparison of species richness in native western North American forests and Patagonian plantations from Argentina. Mycorrhiza 17:355–373, doi:10.1007/s00572-007-0121-x. 10 p.
  • BinderMBresinskyA. 2002. Derivation of a polymorphic lineage of Gasteromycetes from boletoid ancestors. Mycologia 94:85–98, doi:10.2307/3761848
  • BinderMHibbettDS. 2006. Molecular systematics and biological diversification of Boletales. Mycologia 98: 971–981, doi:10.3852/mycologia.98.6.917
  • BrunsTSzaroTGardesMCullingsKPanJTaylorDLHortonTRKretzerAGarbelottoMLiY. 1998. A sequence database for the identification of ectomycorrhizal basidiomycetes by phylogenetic analysis. Mol Ecol 7:257–272.
  • CastellanoMASmithJEO’DellTECázaresENugentS. 1999. Handbook to strategy 1 fungal species in the Northwest Forest Plan. Gen. Tech. Rep. PNW-GTR-476. Portland, Oregon: Department of Agriculture, Forest Service, Pacific Northwest Research Station. 195 p.
  • Edgar RobertC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32.5:1792–1797, 10.1093/nar/gkh340
  • GardesMBrunsTD. 1993. ITS primers with enhanced specificity for basidiomycetes—application to the identification of mycorrhizae and rusts. Mol Ecol 2:113–118, doi:10.1111/j.1365-294X.1993.tb00005.x
  • GlennTSchableN. 2005. Isolating microsatelline DNA loci. In: ZimmerEARoalsonEH, eds. Molecular evolution: producing the biochemical data, part B. San Diego, California: Academic Press. p 202–222.
  • GuzmánG. 1971. A new delimitation of probable phylogeny of the family Sclerodermataceae. Trans Br Mycol Soc 56: 195–199, doi:10.1016/S0007-1536(71)80030-X
  • HallDS. 1991. Diet of the northern flying squirrel at Sagehen Creek, California. J Mamm 72:615–617, doi:10.2307/1382146
  • HobbieEA. 2005. Using isotopic tracers to follow carbon and nitrogen cycling of fungi. In: DightonJOudemansPWhiteJ, eds. The fungal community: its organization and role in the ecosystem. 3rd ed. New York: Taylor & Francis. p 361–381.
  • HobbieEAHögbergP. 2012. Nitrogen isotopes link mycorrhizal fungi and plants to nitrogen dynamics. New Phytol 196:367–382, doi:10.1111/j.1469-8137.2012.04300.x
  • HobbieEASánchezFSRygiewiczPT. 2012. Controls of isotopic patterns in saprotrophic and ectomycorrhizal fungi. Soil Biol Biochem 48:60–68, doi:10.1016/j.soilbio.2012.01.014
  • HobbieEAvan DiepenLTALilleskovEAOuimetteAPFinziACHofmockelKS. 2014. Fungal functioning in a pine forest: evidence from a 15N-labeled global change experiment. New Phytol 201:1431–1439, doi:10.1111/nph.12578
  • HobbieEAWeberNSTrappeJM. 2001. Mycorrhizal vs saprotrophic status of fungi: the isotopic evidence. New Phytol 150:601–610, doi:10.1046/j.1469-8137.2001.00134.x
  • KohnMJ. 2010. Carbon isotope compositions of terrestrial C3 plants as indicators of (paleo) ecology and (paleo) climate. Proc Natl Acad Sci 107:19691–19695, doi:10.1073/pnas.1004933107
  • KotterMMFarentinosRC. 1984a. Formation of ponderosa pine ectomycorrhizae after inoculation with feces of tassel-eared squirrels. Mycologia 76: 758–760, doi:10.2307/3793237
  • KotterMMFarentinosRC. 1984b. Tassel-eared squirrels as spore dispersal agents of hypogeous mycorrhizal fungi. J Mamm 65:684–687, doi:10.2307/1380853
  • LarssonK-H. 2007. Rethinking the classification of corticioid fungi. Mycol Res 111:1040–1063, doi:10.1016/j.mycres.2007.08.001
  • LebelTBeeverRECastellanoMA. 2015. Cryptic diversity in the sequestrate genus Stephanospora (Stephanosporaceae: Agaricales) in Australasia. Fungal Divers 119:201–228, doi:10.1016/j.funbio.2014.12.007 (in press).
  • LehmkuhlJFGouldLECázaresEHosfordDR. 2004. Truffle abundance and mycophagy by northern flying squirrels in eastern Washington forests. For Ecol Manage 200:49–65, doi:10.1016/j.foreco.2004.06.006
  • LindahlBDIhrmarkKBobergJTrumboreSEHögbergPStenlidJFinlayRD. 2007. Spatial separation of litter decomposition and mycorrhizal nitrogen uptake in a boreal forest. New Phytol 173:611–620, doi:10.1111/j.1469-8137.2006.01936.x
  • MaddisonWPMaddisonDR. 2006. Mesquite 1.12: a modular system for evolutionary analysis. http://mesquiteproject.org.
  • MayorJRSchuurEAGHenkelTW. 2009. Elucidating the nutritional dynamics of fungi using stable isotopes. Ecol Lett 12:171–183, doi:10.1111/j.1461-0248.2008.01265.x
  • McCabeDEEscobarGA. 1979. Chyrosoconia, a gasteroid member of the Coniophoraceae. Mycotaxon 9:239–242.
  • McCarrollDLoaderNJ. 2004. Stable isotopes in tree rings. Quat Sci Rev 23:771–801, doi:10.1016/j.quascirev.2003.06.017
  • MolinaRMassicotteHTrappeJM. 1992. Specificity phenomena in mycorrhizal symbioses: community-ecological consequences and practical implications. In: AllenMF, ed. Mycorrhizal functioning: an integrative plant-fungal process. New York: Chapman & Hall. p 357–423.
  • RehnerSABuckleyA. 2005. Beauveria phylogeny inferred from nuclear ITS and EF1-α sequences: evidence for cryptic diversification and links to Cordyceps teleomorphs. Mycologia, 97:84–98, doi:10.3852/mycologia.97.1.84.
  • RobledoGLGiorgioEMFrancoCRPPopoffODecockC. 2014. Gyrodontium sacchari (Spreng.: Fr.) Hjortstam (Boletales, Basidiomycota) in America: New records and its geographic distribution. Check List 10:1514–1519.
  • SkredeIEnghIBBinderMCarlsenTKauserudHBendiksbyM. 2011. Evolutionary history of Serpulaceae (Basidiomycota): molecular phylogeny, historical biogeography and evidence for a single transition of nutritional mode. BMC Evol Biol 11:230, doi:10.1186/1471-2148-11-230
  • SmithAH. 1951. Puffballs and their allies in Michigan. Ann Arbor: Univ. Michigan Press. 104 p.
  • StamatakisA. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688–2690, doi:10.1093/bioinformatics/btl446
  • StamatakisAHooverPRougemontJ. 2008. A rapid bootstrap algorithm for the RAxML web-servers. Syst Biol 75: 758–771.
  • StanikunaiteRTrappeJMKhanSIRossSA. 2007. Evaluation of therapeutic activity of hypogeous ascomycetes and basidiomycetes from North America. Int J Med Mush 9:7–14, doi:10.1615/IntJMedMushr.v9.i1.20
  • StatesJS. 1984. New records of false truffles in pine forest of Arizona. Mycotaxon 19:351–367.
  • StatesJSGaudWS. 1997. Ecology of hypogeous fungi associated with ponderosa pine I. Patterns of distribution and sporocarp production in some Arizona forests. Mycologia 89:712–721.
  • SwoffordDL. 2002. PAUP* 4.0: phylogenetic analysis using parsimony (*and other methods) Sunderland: Massachusetts: Sinauer Associates.
  • TalbotJMAllisonSDTresederKK. 2008. Decomposers in disguise: mycorrhizal fungi as regulators of soil C dynamics in ecosystems under global change. Funct Ecol 22:955–963, doi:10.1111/j.1365-2435.2008.01402.x
  • TaylorAFSFranssonPMHögbergPHögbergMNPlamboeckAH. 2003. Species level patterns in 13C and 15N abundance of ectomycorrhizal and saprotrophic fungal sporocarps. New Phytol 159:757–774, doi:10.1046/j.1469-8137.2003.00838.x.
  • TedersooLSmithME. 2013. Lineages of ectomycorrhizal fungi revisited: Foraging strategies and novel lineages revealed by sequences from belowground. Fungal Biol Rev 27:83–99, doi:10.1016/j.fbr.2013.09.001
  • ThiersHD. 1984. The secotioid syndrome. Mycologia 76: 1–8, doi:10.2307/3792830
  • TrappeMJEvansFTrappeJM. 2007. Field guide to North American truffles: hunting, identifying, and enjoying the world’s most prized fungi. Berkeley, California: Ten Speed Press. 144 p.
  • VasiliauskasRMenkisAFinlayRDStenlidJ. 2007. Wood-decay fungi in fine living roots of conifer seedlings. New Phytol 174:441–446, doi:10.1111/j.1469-8137.2007.02014.x
  • VilgalysRHesterM. 1990. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol 172:4239–4246.
  • WatersJRMcKelveyKSLuomaDLZabelCJ. 1997. Truffle production in old-growth and mature fir stands in northeastern California. For Ecol Manage 96:155–166, doi:10.1016/S0378-1127(97)00016-9
  • ZellerSM. 1941. Further notes on fungi. Mycologia 33:196–214, doi:10.2307/3754932
  • ZellerSM. 1948. Notes on certain Gasteromycetes, including two new orders. Mycologia 40:639–668, doi:10.2307/3755316
  • ZellerSM. 1949. Keys to the orders, families and genera of the Gasteromycetes. Mycologia 41:36–58, doi:10.2307/3755271
  • ZwicklDJ. 2006. Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion [doctoral dissertation]. Austin: Univ. Texas. 115 p.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.