575
Views
4
CrossRef citations to date
0
Altmetric
Original Articles

Global diversity and phylogeny of the Phellinus igniarius complex (Hymenochaetales, Basidiomycota) with the description of five new species

, , &
Pages 192-204 | Received 22 Apr 2015, Accepted 16 Oct 2015, Published online: 20 Jan 2017

Literature cited

  • BaltazarJMGibertoniTB. 2010. New combinations in Phellinus s.l. and Inonotus s.l. Mycotaxon 111:205–208, doi:10.5248/111.205
  • CoelhoGda SilveiraRMBGuerreroRTRajchenbergM. 2009. On poroid Hymenochaetales growing on bamboos in southern Brazil and NE Argentina. Fungal Divers 36:1–8.
  • CuiBKDaiYC. 2012. Wood-decaying fungi in eastern Himalayas 3. Polypores from Laojunshan Mountains, Yunnan Province. Mycosystema 31:486–492.
  • DaiYC. 2010. Hymenochaetaceae (Basidiomycota) in China. Fungal Divers 45:131–343, doi:10.1007/s13225-010-0066-9
  • DaiYCXueHJVlasákJRajchenbergMWangBZhouLW. 2014. Phylogeny and global diversity of Polyporus group Melanopus (Polyporales, Basidiomycota). Fungal Divers 64:133–144, doi:10.1007/s13225-013-0248-3
  • DaiYCYangF. 2008. A new species of Phellinus (Basidiomycota, Hymenochaetales) from western China. Mycotaxon 104:103–106.
  • DaiYCZhangXQZhouTS. 2001. New and noteworthy species of Hymenochaetaceae from China. Mycosystema 20:16–21.
  • DarribaDTaboadaGLDoalloRPosadaD. 2012. jModel-Test 2: more models, new heuristics and parallel computing. Nat Methods 9:772, doi:10.1038/nmeth.2109
  • DecockCHerrera FigueroaSRobledoGCastilloG. 2006. Phellinus caribaeo-quercicolus sp. nov., parasitic on Quercus cubana: taxonomy and preliminary phylogenetic relationships. Mycologia 98:265–274.
  • DiMXWeiYLGuY. 2012. Three species of Phellinus (Basidiomycota, Hymenochaetaceae) new to China. Mycosystema 31:940–946.
  • FarrisJSKällersjöMKlugeAGBultC. 1994. Testing significance of incongruence. Cladistics 10:315–319, doi:10.1111/j.1096-0031.1994.tb00181.x
  • FiassonJLNiemeläT. 1984. The Hymenochaetales: a revision of the European poroid taxa. Karstenia 24:14–28.
  • FischerM. 1995. Phellinus igniarius and its closest relatives in Europe. Mycol Res 99:735–744, doi:10.1016/S0953-7562(09)80538-8
  • FischerMBinderM. 2004. Species recognition, geographic distribution and host-pathogen relationships: a case study in a group of lignicolous Basidiomycetes, Phellinus s.l. Mycologia 96:799–811.
  • FriesEM. 1874. Hymenomycetes europaei. Uppsala, Sweden: Berling. 773 p.
  • Ghobad-NejhadMDaiYC. 2007. The genus Phellinus s.l. (Basidiomycota) in Iran. Mycotaxon 101:201–222.
  • GilbertsonRLRyvardenL. 1987. North American polypores 2. Oslo, Norway: Fungiflora. 885 p.
  • GroposoCLoguercio-LeiteCGóes-NetoA. 2007. Fuscoporia (Basidiomycota, Hymenochaetales) in southern Brazil. Mycotaxon 101:55–63.
  • GuindonSGascuelO. 2003. A simple, fast and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52:696–704, doi:10.1080/10635150390235520
  • KatohKStandleyDM. 2013. MAFFT: multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol 30:772–780, doi:10.1093/molbev/mst010
  • KatohKTohH. 2008. Recent developments in the MAFFT multiple sequence alignment program. Brief Bioinform 9:286–298, doi:10.1093/bib/bbn013
  • LarsenMJCobb-PoulleLA. 1990. Phellinus (Hymenochaetaceae). A survey of the world taxa. Synopsis Fungorum 3:1–206.
  • MathenyPBWangZBinderMCurtisJMLimYWNilssonRHHughesKWHofstetterVAmmiratiJFSchochCLLangerELangerGMcLaughlinDJWilsonAWFroslevTGeZWKerriganRWSlotJCYangZLBaroniTJFischerMHosakaKMatsuuraKSeidlMTVaurasJHibbettDS. 2007. Contributions of rpb2 and tef1 to the phylogeny of mushrooms and allies (Basidiomycota, Fungi). Mol Phylogenet Evol 43:430–451.
  • MurrillWA. 1907. Polyporaceae 1. N Am Flora 9:1–72.
  • NiemeläT. 1972. On Fennoscandian polypores 2. Phellinus laevigatus (Fr.) Bourd. & Galz. and P. lundellii Niemelä, n. sp. Ann Bot Fenn 9:41–59.
  • NiemeläT. 1974. On Fennoscandian polypores 3. Phellinus tremulae (Bond.) Bond. & Borisov. Ann Bot Fenn 11:202–205.
  • NiemeläT. 1975. On Fennoscandian polypores 4. Phellinus igniarius, P. nigricans and P. populicola, n. sp. Ann Bot Fenn 12:93–122.
  • NiemeläT. 1977. On Fennoscandian polypores 5. Phellinus pomaceus. Karstenia 17:77–86.
  • NiemeläTKotirantaH. 1982. Polypore survey of Finland 2. The genus Phellinus. Karstenia 22:27–42.
  • NiemeläTWagnerTFischerMDaiYC. 2001. Phellopilus gen. nov. and its affinities within Phellinus s. lato and Inonotus s. lato (Basidiomycetes). Ann Bot Fenn 38:51–62.
  • NúñezMRyvardenL. 2000. East Asian polypores 1. Ganodermataceae and Hymenochaetaceae. Synopsis Fungorum 13:1–168.
  • ParmastoE. 1985. The species concept in Hymenochaetaceae (Fungi, Hymenomycetes). Proc Indian Acad Sci (Plant Sci) 94:369–380, doi:10.1007/BF03053152
  • ParmastoE. 2007. Phellinus laevigatus s.l. (Hymenochaetales): a ring species. Folia Cryptogam Est 43:39–49.
  • PattengaleNDAlipourMBininda-EmondsORPMoretBMEStamatakisA. 2010. How many bootstrap replicates are necessary? J Comput Biol 17:337–354, doi:10.1089/cmb.2009.0179
  • PetersenJH. 1996. Farvekort. The Danish Mycological Society’s color chart. Greve, Denmark: Foreningen til Svampekundskabens Fremme.
  • RonquistFHuelsenbeckJP. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–1574, doi:10.1093/bioinformatics/btg180
  • RyvardenL. 2004. Neotropical polypores 1. Introduction, Ganodermataceae and Hymenochaetaceae. Synopsis Fungorum 19:1–227.
  • RyvardenLMeloI. 2014. Poroid fungi of Europe. Synopsis Fungorum 31:1–455.
  • SellI. 2008. Taxonomy of the species in the Phellinus igniarius group. Mycotaxon 104:337–347.
  • SilvestroDMichalakI. 2012. raxmlGUI: a graphical frontend for RAxML. Org Divers Evol 12:335–337, doi:10.1007/s13127-011-0056-0
  • StamatakisA. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22:2688–2690, doi:10.1093/bioinformatics/btl446
  • SwoffordDL. 2002. PAUP* 4.0b10: phylogenetic analysis using parsimony (*and other methods). Sunderland, Massachusetts: Sinauer Associates.
  • TomšovskýMVampolaPSedlákPByrtusováZJankovskýL. 2010. Delimitation of central and northern European species of the Phellinus igniarius group (Basidiomycota, Hymenochaetales) based on analysis of ITS and translation elongation factor 1 alpha DNA sequences. Mycol Prog 9:431–445, doi:10.1007/s11557-009-0653-x
  • VlasákJKoutJ. 2011. Tropical Trametes lactinea is widely distributed in the eastern USA. Mycotaxon 115:271–279, doi:10.5248/115.271
  • WagnerTFischerM. 2001. Natural groups and a revised system for the European poroid Hymenochaetales (Basidiomycota) supported by nLSU rDNA sequence data. Mycol Res 105:773–782, doi:10.1017/S0953756201004257
  • WagnerTFischerM. 2002. Proceedings toward a natural classification of the worldwide taxa Phellinus s.l. and Inonotus s.l., and phylogenetic relationships of allied genera. Mycologia 94:998–1016.
  • WhiteTJBrunsTLeeSTaylorJ. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: InnisMAGelfandDHSninskyJJWhiteTJ, eds. PCR protocols: a guide to methods and applications. San Diego, California: Academic Press. p 315–322.
  • YombiyeniPDouanla-MeliCAmalfiMDecockC. 2011. Poroid Hymenochaetaceae from Guineo-Congolian rainforest: Phellinus gabonensis sp. nov. from Gabon—taxonomy and phylogenetic relationships. Mycol Prog 10:351–362, doi:10.1007/s11557-010-0708-z
  • ZhouLWVlasákJDecockCAssefaAStenlidJAbateDWuSHDaiYC. 2016. Global diversity and taxonomy of the Inonotus linteus complex (Hymenochaetales, Basidiomycota): Sanghuangporus gen. nov., Tropicoporus excentrodendri and T. guanacastensis gen. et sp. nov. and 17 new combinations. Fungal Divers, 10.1007/s13225-015-0335-8

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.