Tctex1d2 associates with short-rib polydactyly syndrome proteins and is required for ciliogenesis

References

• Waters AM, Beales PL. Ciliopathies: an expanding disease spectrum. Pediatr Nephrol 2011; 26:1039-56; PMID:21210154; http://dx.doi.org/10.1007/s00467-010-1731-7
   PubMed Web of Science ®Google Scholar
• Hildebrandt F, Benzing T, Katsanis N. Ciliopathies. N Engl J Med 2011; 364:1533-43; PMID:21506742; http://dx.doi.org/10.1056/NEJMra1010172
   PubMed Web of Science ®Google Scholar
• Huber C, Cormier-Daire V. Ciliary disorder of the skeleton. Am J Med Genet C Semin Med Genet 2012; 160C:165-74; PMID:22791528; http://dx.doi.org/10.1002/ajmg.c.31336
   PubMed Web of Science ®Google Scholar
• McInerney-Leo AM, Schmidts M, Cortes CR, Leo PJ, Gener B, Courtney AD, Gardiner B, Harris JA, Lu Y, Marshall M, et al. Short-rib polydactyly and Jeune syndromes are caused by mutations in WDR60. Am J Hum Genet 2013; 93:515-23; PMID:23910462; http://dx.doi.org/10.1016/j.ajhg.2013.06.022
   PubMed Web of Science ®Google Scholar
• Schmidts M, Vodopiutz J, Christou-Savina S, Cortes CR, McInerney-Leo AM, Emes RD, Arts HH, Tuysuz B, D'Silva J, Leo PJ, et al. Mutations in the gene encoding IFT dynein complex component WDR34 cause Jeune asphyxiating thoracic dystrophy. Am J Hum Genet 2013; 93:932-44; PMID:24183451; http://dx.doi.org/10.1016/j.ajhg.2013.10.003
   PubMed Web of Science ®Google Scholar
• Patel-King RS, Gilberti RM, Hom EF, King SM. WD60/FAP163 is a dynein intermediate chain required for retrograde intraflagellar transport in cilia. Mol Biol Cell 2013; 24:2668-77; PMID:23864713; http://dx.doi.org/10.1091/mbc.E13-05-0266
   PubMed Web of Science ®Google Scholar
• Rompolas P, Pedersen LB, Patel-King RS, King SM. Chlamydomonas FAP133 is a dynein intermediate chain associated with the retrograde intraflagellar transport motor. J Cell Sci 2007; 120:3653-65; PMID:17895364; http://dx.doi.org/10.1242/jcs.012773
   PubMed Web of Science ®Google Scholar
• Hutchins JR, Toyoda Y, Hegemann B, Poser I, Heriche JK, Sykora MM, Augsburg M, Hudecz O, Buschhorn BA, Bulkescher J, et al. Systematic analysis of human protein complexes identifies chromosome segregation proteins. Science 2010; 328:593-9; PMID:20360068; http://dx.doi.org/10.1126/science.1181348
   PubMed Web of Science ®Google Scholar
• Palmer KJ, MacCarthy-Morrogh L, Smyllie N, Stephens DJ. A role for Tctex-1 (DYNLT1) in controlling primary cilium length. Eur J Cell Biol 2011; 90:865-71; PMID:21700358; http://dx.doi.org/10.1016/j.ejcb.2011.05.003
   PubMed Web of Science ®Google Scholar
• Pazour GJ, Wilkerson CG, Witman GB. A dynein light chain is essential for the retrograde particle movement of intraflagellar transport (IFT). J Cell Biol 1998; 141:979-92; PMID:9585416; http://dx.doi.org/10.1083/jcb.141.4.979
   PubMed Web of Science ®Google Scholar
• Korrodi-Gregorio L, Margarida Lopes A, Esteves SL, Afonso S, Lemos de Matos A, Lissovsky AA, da Cruz ESOA, da Cruz ESEF, Esteves PJ, Fardilha M. An intriguing shift occurs in the novel protein phosphatase 1 binding partner, TCTEX1D4: evidence of positive selection in a Pika model. PLoS One 2013; 8:e77236; PMID:24130861; http://dx.doi.org/10.1371/journal.pone.0077236
   PubMed Web of Science ®Google Scholar
• Korrodi-Gregorio L, Vieira SI, Esteves SL, Silva JV, Freitas MJ, Brauns AK, Luers G, Abrantes J, Esteves PJ, da Cruz ESOA, et al. TCTEX1D4, a novel protein phosphatase 1 interactor: connecting the phosphatase to the microtubule network. Biol Open 2013; 2:453-65; PMID:23789093; http://dx.doi.org/10.1242/bio.20131065
   PubMed Web of Science ®Google Scholar
• Torres JZ, Summers MK, Peterson D, Brauer MJ, Lee J, Senese S, Gholkar AA, Lo YC, Lei X, Jung K, et al. The STARD9/Kif16a Kinesin Associates with Mitotic Microtubules and Regulates Spindle Pole Assembly. Cell 2011; 147:1309-23; PMID:22153075; http://dx.doi.org/10.1016/j.cell.2011.11.020
   PubMed Web of Science ®Google Scholar
• Pfister KK, Shah PR, Hummerich H, Russ A, Cotton J, Annuar AA, King SM, Fisher EM. Genetic analysis of the cytoplasmic dynein subunit families. PLoS Genet 2006; 2:e1; PMID:16440056; http://dx.doi.org/10.1371/journal.pgen.0020001
   PubMed Web of Science ®Google Scholar
• Tai AW, Chuang JZ, Bode C, Wolfrum U, Sung CH. Rhodopsin's carboxy-terminal cytoplasmic tail acts as a membrane receptor for cytoplasmic dynein by binding to the dynein light chain Tctex-1. Cell 1999; 97:877-87; PMID:10399916; http://dx.doi.org/10.1016/S0092-8674(00)80800-4
   PubMed Web of Science ®Google Scholar
• Mok YK, Lo KW, Zhang M. Structure of Tctex-1 and its interaction with cytoplasmic dynein intermediate chain. J Biol Chem 2001; 276:14067-74; PMID:11148215
   PubMed Web of Science ®Google Scholar
• Inglis PN, Boroevich KA, Leroux MR. Piecing together a ciliome. Trends Genet 2006; 22:491-500; PMID:16860433; http://dx.doi.org/10.1016/j.tig.2006.07.006
   PubMed Web of Science ®Google Scholar
• Stolc V, Samanta MP, Tongprasit W, Marshall WF. Genome-wide transcriptional analysis of flagellar regeneration in Chlamydomonas reinhardtii identifies orthologs of ciliary disease genes. Proc Natl Acad Sci U S A 2005; 102:3703-7; PMID:15738400; http://dx.doi.org/10.1073/pnas.0408358102
   PubMed Web of Science ®Google Scholar
• Efimenko E, Bubb K, Mak HY, Holzman T, Leroux MR, Ruvkun G, Thomas JH, Swoboda P. Analysis of xbx genes in C. elegans. Development 2005; 132:1923-34; PMID:15790967; http://dx.doi.org/10.1242/dev.01775
   PubMed Web of Science ®Google Scholar
• Pazour GJ, Agrin N, Leszyk J, Witman GB. Proteomic analysis of a eukaryotic cilium. J Cell Biol 2005; 170:103-13; PMID:15998802; http://dx.doi.org/10.1083/jcb.200504008
   PubMed Web of Science ®Google Scholar
• Smith JC, Northey JG, Garg J, Pearlman RE, Siu KW. Robust method for proteome analysis by MS/MS using an entire translated genome: demonstration on the ciliome of Tetrahymena thermophila. J Proteome Res 2005; 4:909-19; PMID:15952738; http://dx.doi.org/10.1021/pr050013h
   PubMed Web of Science ®Google Scholar
• McClintock TS, Glasser CE, Bose SC, Bergman DA. Tissue expression patterns identify mouse cilia genes. Physiol Genomics 2008; 32:198-206; PMID:17971504; http://dx.doi.org/10.1152/physiolgenomics.00128.2007
   PubMed Web of Science ®Google Scholar
• Torres JZ, Miller JJ, Jackson PK. High-throughput generation of tagged stable cell lines for proteomic analysis. Proteomics 2009; 9:2888-91; PMID:19405035; http://dx.doi.org/10.1002/pmic.200800873
   PubMed Web of Science ®Google Scholar
• Shannon P, Markiel A, Ozier O, Baliga NS, Wang JT, Ramage D, Amin N, Schwikowski B, Ideker T. Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res 2003; 13:2498-504; PMID:14597658; http://dx.doi.org/10.1101/gr.1239303
   PubMed Web of Science ®Google Scholar
• Badano JL, Ansley SJ, Leitch CC, Lewis RA, Lupski JR, Katsanis N. Identification of a novel Bardet-Biedl syndrome protein, BBS7, that shares structural features with BBS1 and BBS2. Am J Hum Genet 2003; 72:650-8; PMID:12567324; http://dx.doi.org/10.1086/368204
   PubMed Web of Science ®Google Scholar
• Brancati F, Iannicelli M, Travaglini L, Mazzotta A, Bertini E, Boltshauser E, D'Arrigo S, Emma F, Fazzi E, Gallizzi R, et al. MKS3/TMEM67 mutations are a major cause of COACH Syndrome, a Joubert Syndrome related disorder with liver involvement. Hum Mutat 2009; 30:E432-42; PMID:19058225; http://dx.doi.org/10.1002/humu.20924
   PubMed Web of Science ®Google Scholar
• Mohan S, Timbers TA, Kennedy J, Blacque OE, Leroux MR. Striated rootlet and nonfilamentous forms of rootletin maintain ciliary function. Curr Biol 2013; 23:2016-22; PMID:24094853; http://dx.doi.org/10.1016/j.cub.2013.08.033
   PubMed Web of Science ®Google Scholar
• Graser S, Stierhof YD, Lavoie SB, Gassner OS, Lamla S, Le Clech M, Nigg EA. Cep164, a novel centriole appendage protein required for primary cilium formation. J Cell Biol 2007; 179:321-30; PMID:17954613; http://dx.doi.org/10.1083/jcb.200707181
   PubMed Web of Science ®Google Scholar
• Goetz SC, Liem KF, Jr., Anderson KV. The spinocerebellar ataxia-associated gene Tau tubulin kinase 2 controls the initiation of ciliogenesis. Cell 2012; 151:847-58; PMID:23141541; http://dx.doi.org/10.1016/j.cell.2012.10.010
   PubMed Web of Science ®Google Scholar
• Pazour GJ, Dickert BL, Vucica Y, Seeley ES, Rosenbaum JL, Witman GB, Cole DG. Chlamydomonas IFT88 and its mouse homologue, polycystic kidney disease gene tg737, are required for assembly of cilia and flagella. J Cell Biol 2000; 151:709-18; PMID:11062270; http://dx.doi.org/10.1083/jcb.151.3.709
   PubMed Web of Science ®Google Scholar
• Merrill AE, Merriman B, Farrington-Rock C, Camacho N, Sebald ET, Funari VA, Schibler MJ, Firestein MH, Cohn ZA, Priore MA, et al. Ciliary abnormalities due to defects in the retrograde transport protein DYNC2H1 in short-rib polydactyly syndrome. Am J Hum Genet 2009; 84:542-9; PMID:19361615; http://dx.doi.org/10.1016/j.ajhg.2009.03.015
   PubMed Web of Science ®Google Scholar
• Torres JZ, Ban KH, Jackson PK. A specific form of phospho protein phosphatase 2 regulates anaphase-promoting complex/cyclosome association with spindle poles. Mol Biol Cell 2010; 21:897-904; PMID:20089842; http://dx.doi.org/10.1091/mbc.E09-07-0598
   PubMed Web of Science ®Google Scholar
• Vanderwerf SM, Svahn J, Olson S, Rathbun RK, Harrington C, Yates J, Keeble W, Anderson DC, Anur P, Pereira NF, et al. TLR8-dependent TNF-(alpha) overexpression in Fanconi anemia group C cells. Blood 2009; 114:5290-8; PMID:19850743; http://dx.doi.org/10.1182/blood-2009-05-222414
   PubMed Web of Science ®Google Scholar
• Patananan AN, Capri J, Whitelegge JP, Clarke SG. Non-repair pathways for minimizing protein isoaspartyl damage in the yeast saccharomyces cerevisiae. J Biol Chem 2014; 289:16936-53; PMID:24764295; http://dx.doi.org/10.1074/jbc.M114.564385
   PubMed Web of Science ®Google Scholar