Chondrocyte channel transcriptomics

References

• Barrett-Jolley R, Lewis R, Fallman R, Mobasheri A. The emerging chondrocyte channelome. Frontiers in Membrane Physiol Biophys 2010; 1.
   Google Scholar
• Lewis R, Feetham CH, Barrett-Jolley R. Cell volume regulation in chondrocytes. Cell Physiol Biochem 2011; 28:1111 - 22; http://dx.doi.org/10.1159/000335847; PMID: 22179000
   PubMed Web of Science ®Google Scholar
• Kumagai K, Imai S, Toyoda F, Okumura N, Isoya E, Matsuura H, et al. 17β-Estradiol inhibits the doxorubicin-induced apoptosis via block of volume-sensitive Cl+ current in rabbit articular chondrocytes. Br J Pharmacol 2011; 166:702 - 20; http://dx.doi.org/10.1111/j.1476-5381.2011.01802.x
   Web of Science ®Google Scholar
• Mobasheri A, Lewis R, Ferreira-Mendes A, Rufino A, Dart C, Barrett-Jolley R. Potassium channels in articular chondrocytes. Channels (Austin) 2012; 6:416 - 25; http://dx.doi.org/10.4161/chan.22340; PMID: 23064164
   PubMed Web of Science ®Google Scholar
• Funabashi K, Ohya S, Yamamura H, Hatano N, Muraki K, Giles W, Imaizumi Y. Accelerated Ca2+ entry by membrane hyperpolarization due to Ca2+-activated K+ channel activation in response to histamine in chondrocytes. Am J Physiol Cell Physiol 2010; 298:C786 - 97; http://dx.doi.org/10.1152/ajpcell.00469.2009; PMID: 20042729
   PubMed Web of Science ®Google Scholar
• Lewis R, Asplin KE, Bruce G, Dart C, Mobasheri A, Barrett-Jolley R. The role of the membrane potential in chondrocyte volume regulation. J Cell Physiol 2011; 226:2979 - 86; http://dx.doi.org/10.1002/jcp.22646; PMID: 21328349
   PubMed Web of Science ®Google Scholar
• Gygi SP, Rochon Y, Franza BR, Aebersold R. Correlation between protein and mRNA abundance in yeast. Mol Cell Biol 1999; 19:1720 - 30; PMID: 10022859
   PubMed Web of Science ®Google Scholar
• Tyagi SE. Genomics. E. coli, what a noisy bug. Science 2010; 329:518 - 9; http://dx.doi.org/10.1126/science.1194036; PMID: 20671174
   PubMed Web of Science ®Google Scholar
• Guo YF, Xiao P, Lei SF, Deng FY, Xiao GG, Liu YZ, Chen X, Li L, Wu S, Chen Y, et al. How is mRNA expression predictive for protein expression? A correlation study on human circulating monocytes. Acta Biochim Biophys Sin (Shanghai) 2008; 40:426 - 36; http://dx.doi.org/10.1111/j.1745-7270.2008.00418.x; PMID: 18465028
   PubMed Web of Science ®Google Scholar
• Anderson L, Seilhamer J. A comparison of selected mRNA and protein abundances in human liver. Electrophoresis 1997; 18:533 - 7; http://dx.doi.org/10.1002/elps.1150180333; PMID: 9150937
   PubMed Web of Science ®Google Scholar
• Gouze J-N, Gouze E, Popp MP, Bush ML, Dacanay EA, Kay JD, et al. Exogenous glucosamine globally protects chondrocytes from the arthritogenic effects of IL-1 beta. Arthritis Res Ther 2006; •••:8
   Web of Science ®Google Scholar
• Andreas K, Lübke C, Häupl T, Dehne T, Morawietz L, Ringe J, Kaps C, Sittinger M. Key regulatory molecules of cartilage destruction in rheumatoid arthritis: an in vitro study. Arthritis Res Ther 2008; 10:R9; http://dx.doi.org/10.1186/ar2358; PMID: 18205922
   PubMed Web of Science ®Google Scholar
• Fukada T, Civic N, Furuichi T, Shimoda S, Mishima K, Higashiyama H, Idaira Y, Asada Y, Kitamura H, Yamasaki S, et al. The zinc transporter SLC39A13/ZIP13 is required for connective tissue development; its involvement in BMP/TGF-beta signaling pathways. PLoS One 2008; 3:e3642; http://dx.doi.org/10.1371/journal.pone.0003642; PMID: 18985159
   PubMed Web of Science ®Google Scholar
• Olney RC, Wang JW, Sylvester JE, Mougey EB. Growth factor regulation of human growth plate chondrocyte proliferation in vitro. Biochem Biophys Res Commun 2004; 317:1171 - 82; http://dx.doi.org/10.1016/j.bbrc.2004.03.170; PMID: 15094393
   PubMed Web of Science ®Google Scholar
• Rockel JS, Bernier SM, Leask A. Egr-1 inhibits the expression of extracellular matrix genes in chondrocytes by TNF alpha-induced MEK/ERK signalling. Arthritis Res Ther 2009; •••:11
   Web of Science ®Google Scholar
• Dehne T, Karlsson C, Ringe J, Sittinger M, Lindahl A. Chondrogenic differentiation potential of osteoarthritic chondrocytes and their possible use in matrix-associated autologous chondrocyte transplantation. Arthritis Res Ther 2009; 11:R133; http://dx.doi.org/10.1186/ar2800; PMID: 19723327
   PubMed Web of Science ®Google Scholar
• Saito A, Hino S-i, Murakami T, Kanemoto S, Kondo S, Saitoh M, Nishimura R, Yoneda T, Furuichi T, Ikegawa S, et al. Regulation of endoplasmic reticulum stress response by a BBF2H7-mediated Sec23a pathway is essential for chondrogenesis. Nat Cell Biol 2009; 11:1197 - 204; http://dx.doi.org/10.1038/ncb1962; PMID: 19767744
   PubMed Web of Science ®Google Scholar
• Huang AH, Stein A, Mauck RL. Evaluation of the complex transcriptional topography of mesenchymal stem cell chondrogenesis for cartilage tissue engineering. Tissue Eng Part A 2010; 16:2699 - 708; http://dx.doi.org/10.1089/ten.tea.2010.0042; PMID: 20367254
   PubMed Web of Science ®Google Scholar
• James CG, Ulici V, Tuckermann J, Underhill TM, Beier F. Expression profiling of Dexamethasone-treated primary chondrocytes identifies targets of glucocorticoid signalling in endochondral bone development. BMC Genomics 2007; 8:205; http://dx.doi.org/10.1186/1471-2164-8-205; PMID: 17603917
   PubMed Web of Science ®Google Scholar
• Appleton CTG, Pitelka V, Henry J, Beier F. Global analyses of gene expression in early experimental osteoarthritis. Arthritis Rheum 2007; 56:1854 - 68; http://dx.doi.org/10.1002/art.22711; PMID: 17530714
   PubMed Web of Science ®Google Scholar
• Hubbell E, Liu WM, Mei R. Robust estimators for expression analysis. Bioinformatics 2002; 18:1585 - 92; http://dx.doi.org/10.1093/bioinformatics/18.12.1585; PMID: 12490442
   PubMed Web of Science ®Google Scholar
• Clark RB, Hatano N, Kondo C, Belke DD, Brown BS, Kumar S, Votta BJ, Giles WR. Voltage-gated K+ currents in mouse articular chondrocytes regulate membrane potential. Channels (Austin) 2010; 4:179 - 91; http://dx.doi.org/10.4161/chan.4.3.11629; PMID: 20372061
   PubMed Web of Science ®Google Scholar
• Mobasheri A, Lewis R, Ferreira-Mendes A, Rufino A, Dart C, Barrett-Jolley R. Potassium channels in articular chondrocytes. Channels (Austin) 2012; 6:416 - 25; http://dx.doi.org/10.4161/chan.22340; PMID: 23064164
   PubMed Web of Science ®Google Scholar
• Sugimoto T, Yoshino M, Nagao M, Ishii S, Yabu H. Voltage-gated ionic channels in cultured rabbit articular chondrocytes. Comp Biochem Physiol C Pharmacol Toxicol Endocrinol 1996; 115:223 - 32; http://dx.doi.org/10.1016/S0742-8413(96)00091-6; PMID: 9375360
   PubMed Web of Science ®Google Scholar
• Tsuga K, Tohse N, Yoshino M, Sugimoto T, Yamashita T, Ishii S, Yabu H. Chloride conductance determining membrane potential of rabbit articular chondrocytes. J Membr Biol 2002; 185:75 - 81; http://dx.doi.org/10.1007/s00232-001-0112-3; PMID: 11891566
   PubMed Web of Science ®Google Scholar
• Jentsch TJ, Stein V, Weinreich F, Zdebik AA. Molecular structure and physiological function of chloride channels. Physiol Rev 2002; 82:503 - 68; PMID: 11917096
   PubMed Web of Science ®Google Scholar
• Redhead CR, Edelman AE, Brown D, Landry DW, al-Awqati Q. A ubiquitous 64-kDa protein is a component of a chloride channel of plasma and intracellular membranes. Proc Natl Acad Sci U S A 1992; 89:3716 - 20; http://dx.doi.org/10.1073/pnas.89.9.3716; PMID: 1315034
   PubMed Web of Science ®Google Scholar
• Tonini R, Ferroni A, Valenzuela SM, Warton K, Campbell TJ, Breit SN, Mazzanti M. Functional characterization of the NCC27 nuclear protein in stable transfected CHO-K1 cells. FASEB J 2000; 14:1171 - 8; PMID: 10834939
   PubMed Web of Science ®Google Scholar
• Edwards JC, Tulk B, Schlesinger PH. Functional expression of p64, an intracellular chloride channel protein. J Membr Biol 1998; 163:119 - 27; http://dx.doi.org/10.1007/s002329900376; PMID: 9592076
   PubMed Web of Science ®Google Scholar
• Singh H. Two decades with dimorphic Chloride Intracellular Channels (CLICs). FEBS Lett 2010; 584:2112 - 21; http://dx.doi.org/10.1016/j.febslet.2010.03.013; PMID: 20226783
   PubMed Web of Science ®Google Scholar
• Berryman M, Bretscher A. Identification of a novel member of the chloride intracellular channel gene family (CLIC5) that associates with the actin cytoskeleton of placental microvilli. Mol Biol Cell 2000; 11:1509 - 21; http://dx.doi.org/10.1091/mbc.11.5.1509; PMID: 10793131
   PubMed Web of Science ®Google Scholar
• Valenzuela SM, Mazzanti M, Tonini R, Qiu MR, Warton K, Musgrove EA, Campbell TJ, Breit SN. The nuclear chloride ion channel NCC27 is involved in regulation of the cell cycle. J Physiol 2000; 529:541 - 52; http://dx.doi.org/10.1111/j.1469-7793.2000.00541.x; PMID: 11195932
   PubMed Web of Science ®Google Scholar
• Ulmasov B, Bruno J, Woost PG, Edwards JC. Tissue and subcellular distribution of CLIC1. BMC Cell Biol 2007; 8:8; http://dx.doi.org/10.1186/1471-2121-8-8; PMID: 17326840
   PubMed Web of Science ®Google Scholar
• Paulmichl M, Norris AA, Rainey DK. Role of chloride channel modulation in the mechanism of action of nedocromil sodium. Int Arch Allergy Immunol 1995; 107:416; http://dx.doi.org/10.1159/000237060; PMID: 7613196
   PubMed Web of Science ®Google Scholar
• Voets T, Buyse G, Tytgat J, Droogmans G, Eggermont J, Nilius B. The chloride current induced by expression of the protein pICln in Xenopus oocytes differs from the endogenous volume-sensitive chloride current. J Physiol 1996; 495:441 - 7; PMID: 8887755
   PubMed Web of Science ®Google Scholar
• Nilius B, Droogmans G. Amazing chloride channels: an overview. Blackwell Science Ltd, 2003:119-47.
   Google Scholar
• Krapivinsky G, Pu W, Wickman K, Krapivinsky L, Clapham DE. pICln binds to a mammalian homolog of a yeast protein involved in regulation of cell morphology. J Biol Chem 1998; 273:10811 - 4; http://dx.doi.org/10.1074/jbc.273.18.10811; PMID: 9556550
   PubMed Web of Science ®Google Scholar
• Pu WT, Wickman K, Clapham DE. ICln is essential for cellular and early embryonic viability. J Biol Chem 2000; 275:12363 - 6; http://dx.doi.org/10.1074/jbc.275.17.12363; PMID: 10777517
   PubMed Web of Science ®Google Scholar
• Strange K. Molecular identity of the outwardly rectifying, swelling-activated anion channel: time to reevaluate pICln. J Gen Physiol 1998; 111:617 - 22; http://dx.doi.org/10.1085/jgp.111.5.617; PMID: 9565399
   PubMed Web of Science ®Google Scholar
• Fürst J, Gschwentner M, Ritter M, Bottà G, Jakab M, Mayer M, Garavaglia L, Bazzini C, Rodighiero S, Meyer G, et al. Molecular and functional aspects of anionic channels activated during regulatory volume decrease in mammalian cells. Pflugers Arch 2002; 444:1 - 25; http://dx.doi.org/10.1007/s00424-002-0805-1; PMID: 11976912
   PubMed Web of Science ®Google Scholar
• Fürst J, Bazzini C, Jakab M, Meyer G, König M, Gschwentner M, Ritter M, Schmarda A, Bottà G, Benz R, et al. Functional reconstitution of ICln in lipid bilayers. Pflugers Arch 2000; 440:100 - 15; PMID: 10864003
   PubMed Web of Science ®Google Scholar
• Jentsch TJ. Chloride channels are different. Nature 2002; 415:276 - 7; http://dx.doi.org/10.1038/415276a; PMID: 11796992
   PubMed Web of Science ®Google Scholar
• Bahamonde MI, Valverde MA. Voltage-dependent anion channel localises to the plasma membrane and peripheral but not perinuclear mitochondria. Pflugers Arch 2003; 446:309 - 13; PMID: 12698369
   PubMed Web of Science ®Google Scholar
• Kotake S, Yago T, Kawamoto M, Nanke Y. Voltage-dependent anion channels (VDACs, porin) expressed in the plasma membrane regulate the differentiation and function of human osteoclasts. Cell Biol Int 2013; 37:65 - 77; http://dx.doi.org/10.1002/cbin.10013; PMID: 23319323
   PubMed Web of Science ®Google Scholar
• Mobasheri A, Lewis R, Maxwell JEJ, Hill C, Womack M, Barrett-Jolley R. Characterization of a stretch-activated potassium channel in chondrocytes. J Cell Physiol 2010; 223:511 - 8; http://dx.doi.org/10.1002/jcp.22075; PMID: 20162564
   PubMed Web of Science ®Google Scholar
• Meadows LS, Malhotra J, Loukas A, Thyagarajan V, Kazen-Gillespie KA, Koopman MC, Kriegler S, Isom LL, Ragsdale DS. Functional and biochemical analysis of a sodium channel β1 subunit mutation responsible for generalized epilepsy with febrile seizures plus type 1. J Neurosci 2002; 22:10699 - 709; PMID: 12486163
   PubMed Web of Science ®Google Scholar
• Phan MN, Leddy HA, Votta BJ, Kumar S, Levy DS, Lipshutz DB, Lee SH, Liedtke W, Guilak F. Functional characterization of TRPV4 as an osmotically sensitive ion channel in porcine articular chondrocytes. Arthritis Rheum 2009; 60:3028 - 37; http://dx.doi.org/10.1002/art.24799; PMID: 19790068
   PubMed Web of Science ®Google Scholar
• Hdud IM, El-Shafei AA, Loughna P, Barrett-Jolley R, Mobasheri A. Expression of Transient Receptor Potential Vanilloid (TRPV) Channels in Different Passages of Articular Chondrocytes. Int J Mol Sci 2012; 13:4433 - 45; http://dx.doi.org/10.3390/ijms13044433; PMID: 22605988
   PubMed Web of Science ®Google Scholar
• Fernández-Fernández JM, Andrade YN, Arniges M, Fernandes J, Plata C, Rubio-Moscardo F, Vázquez E, Valverde MA. Functional coupling of TRPV4 cationic channel and large conductance, calcium-dependent potassium channel in human bronchial epithelial cell lines. Pflugers Arch 2008; 457:149 - 59; http://dx.doi.org/10.1007/s00424-008-0516-3; PMID: 18458941
   PubMed Web of Science ®Google Scholar
• Karlsson C, Dehne T, Lindahl A, Brittberg M, Pruss A, Sittinger M, Ringe J. Genome-wide expression profiling reveals new candidate genes associated with osteoarthritis. Osteoarthritis Cartilage 2010; 18:581 - 92; http://dx.doi.org/10.1016/j.joca.2009.12.002; PMID: 20060954
   PubMed Web of Science ®Google Scholar
• Preston GM, Carroll TP, Guggino WB, Agre P. Appearance of water channels in Xenopus oocytes expressing red cell CHIP28 protein. Science 1992; 256:385 - 7; http://dx.doi.org/10.1126/science.256.5055.385; PMID: 1373524
   PubMed Web of Science ®Google Scholar
• Yuan F-L, Chen F-H, Lu W-G, Li X, Wu F-R, Li J-P, Li CW, Wang Y, Zhang TY, Hu W. Acid-sensing ion channel 1a mediates acid-induced increases in intracellular calcium in rat articular chondrocytes. Mol Cell Biochem 2010; 340:153 - 9; http://dx.doi.org/10.1007/s11010-010-0412-y; PMID: 20179994
   PubMed Web of Science ®Google Scholar
• Müller EM, Hub JS, Grubmüller H, de Groot BL. Is TEA an inhibitor for human Aquaporin-1?. Pflugers Arch 2008; 456:663 - 9; http://dx.doi.org/10.1007/s00424-007-0422-0; PMID: 18196268
   PubMed Web of Science ®Google Scholar
• Detmers FJM, de Groot BL, Müller EM, Hinton A, Konings IBM, Sze M, Flitsch SL, Grubmüller H, Deen PM. Quaternary ammonium compounds as water channel blockers. Specificity, potency, and site of action. J Biol Chem 2006; 281:14207 - 14; http://dx.doi.org/10.1074/jbc.M513072200; PMID: 16551622
   PubMed Web of Science ®Google Scholar
• Lewis R, Feetham CH, Gentles L, Penny J, Tregilgas L, Tohami W, Mobasheri A, Barrett-Jolley R. Benzamil sensitive ion channels contribute to volume regulation in canine chondrocytes. Br J Pharmacol 2013; 168:1584 - 96; http://dx.doi.org/10.1111/j.1476-5381.2012.02185.x; PMID: 22928819
   PubMed Web of Science ®Google Scholar