Distinct patterns of phosphatidylserine localization within the Rab11a-containing recycling system

References

• Chavrier P, Parton RG, Hauri HP, Simons K, Zerial M. Localization of low molecular weight GTP binding proteins to exocytic and endocytic compartments. Cell 1990; 62:317 - 29; http://dx.doi.org/10.1016/0092-8674(90)90369-P; PMID: 2115402
   PubMed Web of Science ®Google Scholar
• Mizuno-Yamasaki E, Rivera-Molina F, Novick P. GTPase networks in membrane traffic. Annu Rev Biochem 2012; 81:637 - 59; http://dx.doi.org/10.1146/annurev-biochem-052810-093700; PMID: 22463690
   PubMed Web of Science ®Google Scholar
• Sönnichsen B, De Renzis S, Nielsen E, Rietdorf J, Zerial M. Distinct membrane domains on endosomes in the recycling pathway visualized by multicolor imaging of Rab4, Rab5, and Rab11. J Cell Biol 2000; 149:901 - 14; http://dx.doi.org/10.1083/jcb.149.4.901; PMID: 10811830
   PubMed Web of Science ®Google Scholar
• Rink J, Ghigo E, Kalaidzidis Y, Zerial M. Rab conversion as a mechanism of progression from early to late endosomes. Cell 2005; 122:735 - 49; http://dx.doi.org/10.1016/j.cell.2005.06.043; PMID: 16143105
   PubMed Web of Science ®Google Scholar
• Di Paolo G, De Camilli P. Phosphoinositides in cell regulation and membrane dynamics. Nature 2006; 443:651 - 7; http://dx.doi.org/10.1038/nature05185; PMID: 17035995
   PubMed Web of Science ®Google Scholar
• Lee MT, Mishra A, Lambright DG. Structural mechanisms for regulation of membrane traffic by rab GTPases. Traffic 2009; 10:1377 - 89; http://dx.doi.org/10.1111/j.1600-0854.2009.00942.x; PMID: 19522756
   PubMed Web of Science ®Google Scholar
• Ullrich O, Reinsch S, Urbé S, Zerial M, Parton RG. Rab11 regulates recycling through the pericentriolar recycling endosome. J Cell Biol 1996; 135:913 - 24; http://dx.doi.org/10.1083/jcb.135.4.913; PMID: 8922376
   PubMed Web of Science ®Google Scholar
• Prekeris R, Klumperman J, Scheller RHA. A Rab11/Rip11 protein complex regulates apical membrane trafficking via recycling endosomes. Mol Cell 2000; 6:1437 - 48; http://dx.doi.org/10.1016/S1097-2765(00)00140-4; PMID: 11163216
   PubMed Web of Science ®Google Scholar
• Wallace DM, Lindsay AJ, Hendrick AG, McCaffrey MW. Rab11-FIP4 interacts with Rab11 in a GTP-dependent manner and its overexpression condenses the Rab11 positive compartment in HeLa cells. Biochem Biophys Res Commun 2002; 299:770 - 9; http://dx.doi.org/10.1016/S0006-291X(02)02720-1; PMID: 12470645
   PubMed Web of Science ®Google Scholar
• Schonteich E, Wilson GM, Burden J, Hopkins CR, Anderson K, Goldenring JR, Prekeris R. The Rip11/Rab11-FIP5 and kinesin II complex regulates endocytic protein recycling. J Cell Sci 2008; 121:3824 - 33; http://dx.doi.org/10.1242/jcs.032441; PMID: 18957512
   PubMed Web of Science ®Google Scholar
• Lindsay AJ, McCaffrey MW. Rab11-FIP2 functions in transferrin recycling and associates with endosomal membranes via its COOH-terminal domain. J Biol Chem 2002; 277:27193 - 9; http://dx.doi.org/10.1074/jbc.M200757200; PMID: 11994279
   PubMed Web of Science ®Google Scholar
• Hales CM, Vaerman JP, Goldenring JR. Rab11 family interacting protein 2 associates with Myosin Vb and regulates plasma membrane recycling. J Biol Chem 2002; 277:50415 - 21; http://dx.doi.org/10.1074/jbc.M209270200; PMID: 12393859
   PubMed Web of Science ®Google Scholar
• Hales CM, Griner R, Hobdy-Henderson KC, Dorn MC, Hardy D, Kumar R, Navarre J, Chan EK, Lapierre LA, Goldenring JR. Identification and characterization of a family of Rab11-interacting proteins. J Biol Chem 2001; 276:39067 - 75; http://dx.doi.org/10.1074/jbc.M104831200; PMID: 11495908
   PubMed Web of Science ®Google Scholar
• Nishizuka Y. The molecular heterogeneity of protein kinase C and its implications for cellular regulation. Nature 1988; 334:661 - 5; http://dx.doi.org/10.1038/334661a0; PMID: 3045562
   PubMed Web of Science ®Google Scholar
• Cho W. Membrane targeting by C1 and C2 domains. J Biol Chem 2001; 276:32407 - 10; http://dx.doi.org/10.1074/jbc.R100007200; PMID: 11432875
   PubMed Web of Science ®Google Scholar
• Rizo J, Südhof TC. C2-domains, structure and function of a universal Ca2+-binding domain. J Biol Chem 1998; 273:15879 - 82; http://dx.doi.org/10.1074/jbc.273.26.15879; PMID: 9632630
   PubMed Web of Science ®Google Scholar
• Lindsay AJ, McCaffrey MW. The C2 domains of the class I Rab11 family of interacting proteins target recycling vesicles to the plasma membrane. J Cell Sci 2004; 117:4365 - 75; http://dx.doi.org/10.1242/jcs.01280; PMID: 15304524
   PubMed Web of Science ®Google Scholar
• Rainero E, Caswell PT, Muller PA, Grindlay J, McCaffrey MW, Zhang Q, Wakelam MJ, Vousden KH, Graziani A, Norman JC. Diacylglycerol kinase α controls RCP-dependent integrin trafficking to promote invasive migration. J Cell Biol 2012; 196:277 - 95; http://dx.doi.org/10.1083/jcb.201109112; PMID: 22270919
   PubMed Web of Science ®Google Scholar
• Vance JE. Phosphatidylserine and phosphatidylethanolamine in mammalian cells: two metabolically related aminophospholipids. J Lipid Res 2008; 49:1377 - 87; http://dx.doi.org/10.1194/jlr.R700020-JLR200; PMID: 18204094
   PubMed Web of Science ®Google Scholar
• Vance JE, Steenbergen R. Metabolism and functions of phosphatidylserine. Prog Lipid Res 2005; 44:207 - 34; http://dx.doi.org/10.1016/j.plipres.2005.05.001; PMID: 15979148
   PubMed Web of Science ®Google Scholar
• Bohdanowicz M, Grinstein S. Role of phospholipids in endocytosis, phagocytosis, and macropinocytosis. Physiol Rev 2013; 93:69 - 106; http://dx.doi.org/10.1152/physrev.00002.2012; PMID: 23303906
   PubMed Web of Science ®Google Scholar
• Gao J, Zheng H. Illuminating the lipidome to advance biomedical research: peptide-based probes of membrane lipids. Future Med Chem 2013; 5:947 - 59; http://dx.doi.org/10.4155/fmc.13.66; PMID: 23682570
   PubMed Web of Science ®Google Scholar
• Yeung T, Gilbert GE, Shi J, Silvius J, Kapus A, Grinstein S. Membrane phosphatidylserine regulates surface charge and protein localization. Science 2008; 319:210 - 3; http://dx.doi.org/10.1126/science.1152066; PMID: 18187657
   PubMed Web of Science ®Google Scholar
• Jean S, Kiger AA. Coordination between RAB GTPase and phosphoinositide regulation and functions. Nat Rev Mol Cell Biol 2012; 13:463 - 70; http://dx.doi.org/10.1038/nrm3379; PMID: 22722608
   PubMed Web of Science ®Google Scholar
• Baetz NW, Goldenring JR. Rab11-family interacting proteins define spatially and temporally distinct regions within the dynamic Rab11a-dependent recycling system. Mol Biol Cell 2013; 24:643 - 58; http://dx.doi.org/10.1091/mbc.E12-09-0659; PMID: 23283983
   PubMed Web of Science ®Google Scholar
• Lapierre LA, Kumar R, Hales CM, Navarre J, Bhartur SG, Burnette JO, Provance DW Jr., Mercer JA, Bähler M, Goldenring JR. Myosin vb is associated with plasma membrane recycling systems. Mol Biol Cell 2001; 12:1843 - 57; http://dx.doi.org/10.1091/mbc.12.6.1843; PMID: 11408590
   PubMed Web of Science ®Google Scholar
• Fairn GD, Schieber NL, Ariotti N, Murphy S, Kuerschner L, Webb RI, Grinstein S, Parton RG. High-resolution mapping reveals topologically distinct cellular pools of phosphatidylserine. J Cell Biol 2011; 194:257 - 75; http://dx.doi.org/10.1083/jcb.201012028; PMID: 21788369
   PubMed Web of Science ®Google Scholar
• Wallace DM, Lindsay AJ, Hendrick AG, McCaffrey MW. The novel Rab11-FIP/Rip/RCP family of proteins displays extensive homo- and hetero-interacting abilities. Biochem Biophys Res Commun 2002; 292:909 - 15; http://dx.doi.org/10.1006/bbrc.2002.6736; PMID: 11944901
   PubMed Web of Science ®Google Scholar
• Meyers JM, Prekeris R. Formation of mutually exclusive Rab11 complexes with members of the family of Rab11-interacting proteins regulates Rab11 endocytic targeting and function. J Biol Chem 2002; 277:49003 - 10; http://dx.doi.org/10.1074/jbc.M205728200; PMID: 12376546
   PubMed Web of Science ®Google Scholar
• Lindsay AJ, Hendrick AG, Cantalupo G, Senic-Matuglia F, Goud B, Bucci C, McCaffrey MW. Rab coupling protein (RCP), a novel Rab4 and Rab11 effector protein. J Biol Chem 2002; 277:12190 - 9; http://dx.doi.org/10.1074/jbc.M108665200; PMID: 11786538
   PubMed Web of Science ®Google Scholar
• Kelly EE, Horgan CP, Adams C, Patzer TM, Ní Shúilleabháin DM, Norman JC, McCaffrey MW. Class I Rab11-family interacting proteins are binding targets for the Rab14 GTPase. Biol Cell 2010; 102:51 - 62; http://dx.doi.org/10.1042/BC20090068; PMID: 19702578
   PubMed Web of Science ®Google Scholar
• Qi M, Williams JA, Chu H, Chen X, Wang JJ, Ding L, Akhirome E, Wen X, Lapierre LA, Goldenring JR, et al. Rab11-FIP1C and Rab14 direct plasma membrane sorting and particle incorporation of the HIV-1 envelope glycoprotein complex. PLoS Pathog 2013; 9:e1003278; http://dx.doi.org/10.1371/journal.ppat.1003278; PMID: 23592992
   PubMed Web of Science ®Google Scholar
• Donaldson JG. Arfs, phosphoinositides and membrane traffic. Biochem Soc Trans 2005; 33:1276 - 8; http://dx.doi.org/10.1042/BST20051276; PMID: 16246097
   PubMed Web of Science ®Google Scholar
• Shin OH, Ross AH, Mihai I, Exton JH. Identification of arfophilin, a target protein for GTP-bound class II ADP-ribosylation factors. J Biol Chem 1999; 274:36609 - 15; http://dx.doi.org/10.1074/jbc.274.51.36609; PMID: 10593962
   PubMed Web of Science ®Google Scholar
• Mellman I, Nelson WJ. Coordinated protein sorting, targeting and distribution in polarized cells. Nat Rev Mol Cell Biol 2008; 9:833 - 45; http://dx.doi.org/10.1038/nrm2525; PMID: 18946473
   PubMed Web of Science ®Google Scholar
• Gruenberg J. The endocytic pathway: a mosaic of domains. Nat Rev Mol Cell Biol 2001; 2:721 - 30; http://dx.doi.org/10.1038/35096054; PMID: 11584299
   PubMed Web of Science ®Google Scholar
• Barr FA. Review series: Rab GTPases and membrane identity: causal or inconsequential?. J Cell Biol 2013; 202:191 - 9; http://dx.doi.org/10.1083/jcb.201306010; PMID: 23878272
   PubMed Web of Science ®Google Scholar
• Kay JG, Koivusalo M, Ma X, Wohland T, Grinstein S. Phosphatidylserine dynamics in cellular membranes. Mol Biol Cell 2012; 23:2198 - 212; http://dx.doi.org/10.1091/mbc.E11-11-0936; PMID: 22496416
   PubMed Web of Science ®Google Scholar
• Naslavsky N, Weigert R, Donaldson JG. Characterization of a nonclathrin endocytic pathway: membrane cargo and lipid requirements. Mol Biol Cell 2004; 15:3542 - 52; http://dx.doi.org/10.1091/mbc.E04-02-0151; PMID: 15146059
   PubMed Web of Science ®Google Scholar
• Lemmon MA. Membrane recognition by phospholipid-binding domains. Nat Rev Mol Cell Biol 2008; 9:99 - 111; http://dx.doi.org/10.1038/nrm2328; PMID: 18216767
   PubMed Web of Science ®Google Scholar
• Araç D, Chen X, Khant HA, Ubach J, Ludtke SJ, Kikkawa M, Johnson AE, Chiu W, Südhof TC, Rizo J. Close membrane-membrane proximity induced by Ca(2+)-dependent multivalent binding of synaptotagmin-1 to phospholipids. Nat Struct Mol Biol 2006; 13:209 - 17; http://dx.doi.org/10.1038/nsmb1056; PMID: 16491093
   PubMed Web of Science ®Google Scholar
• Huotari J, Helenius A. Endosome maturation. EMBO J 2011; 30:3481 - 500; http://dx.doi.org/10.1038/emboj.2011.286; PMID: 21878991
   PubMed Web of Science ®Google Scholar
• Gillooly DJ, Morrow IC, Lindsay M, Gould R, Bryant NJ, Gaullier JM, Parton RG, Stenmark H. Localization of phosphatidylinositol 3-phosphate in yeast and mammalian cells. EMBO J 2000; 19:4577 - 88; http://dx.doi.org/10.1093/emboj/19.17.4577; PMID: 10970851
   PubMed Web of Science ®Google Scholar
• Li X, Wang X, Zhang X, Zhao M, Tsang WL, Zhang Y, Yau RG, Weisman LS, Xu H. Genetically encoded fluorescent probe to visualize intracellular phosphatidylinositol 3,5-bisphosphate localization and dynamics. Proc Natl Acad Sci U S A 2013; 110:21165 - 70; http://dx.doi.org/10.1073/pnas.1311864110; PMID: 24324172
   PubMed Web of Science ®Google Scholar
• Maxfield FR, Wüstner D. Analysis of cholesterol trafficking with fluorescent probes. Methods Cell Biol 2012; 108:367 - 93; http://dx.doi.org/10.1016/B978-0-12-386487-1.00017-1; PMID: 22325611
   PubMed Web of Science ®Google Scholar
• Ducharme NA, Ham AJ, Lapierre LA, Goldenring JR. Rab11-FIP2 influences multiple components of the endosomal system in polarized MDCK cells. Cell Logist 2011; 1:57 - 68; http://dx.doi.org/10.4161/cl.1.2.15289; PMID: 21686255
   PubMedGoogle Scholar
• Roland JT, Kenworthy AK, Peranen J, Caplan S, Goldenring JR. Myosin Vb interacts with Rab8a on a tubular network containing EHD1 and EHD3. Mol Biol Cell 2007; 18:2828 - 37; http://dx.doi.org/10.1091/mbc.E07-02-0169; PMID: 17507647
   PubMed Web of Science ®Google Scholar
• Jin M, Goldenring JR. The Rab11-FIP1/RCP gene codes for multiple protein transcripts related to the plasma membrane recycling system. Biochim Biophys Acta 2006; 1759:281 - 95; http://dx.doi.org/10.1016/j.bbaexp.2006.06.001; PMID: 16920206
   PubMed Web of Science ®Google Scholar
• Roland JT, Lapierre LA, Goldenring JR. Alternative splicing in class V myosins determines association with Rab10. J Biol Chem 2009; 284:1213 - 23; http://dx.doi.org/10.1074/jbc.M805957200; PMID: 19008234
   PubMed Web of Science ®Google Scholar
• Rizzo MA, Springer GH, Granada B, Piston DW. An improved cyan fluorescent protein variant useful for FRET. Nat Biotechnol 2004; 22:445 - 9; http://dx.doi.org/10.1038/nbt945; PMID: 14990965
   PubMed Web of Science ®Google Scholar
• Gustafsson MG. Surpassing the lateral resolution limit by a factor of two using structured illumination microscopy. J Microsc 2000; 198:82 - 7; http://dx.doi.org/10.1046/j.1365-2818.2000.00710.x; PMID: 10810003
   PubMed Web of Science ®Google Scholar
• Manders EEM, Verbeek FJ, Aten JA. Measurement of co-localisation of objects in dual-colour confocal images. J Microsc 1993; 169:375 - 82; http://dx.doi.org/10.1111/j.1365-2818.1993.tb03313.x
   PubMed Web of Science ®Google Scholar
• Rothbauer U, Zolghadr K, Muyldermans S, Schepers A, Cardoso MC, Leonhardt H. A versatile nanotrap for biochemical and functional studies with fluorescent fusion proteins. Mol Cell Proteomics 2008; 7:282 - 9; http://dx.doi.org/10.1074/mcp.M700342-MCP200; PMID: 17951627
   PubMed Web of Science ®Google Scholar
• Laemmli UK. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 1970; 227:680 - 5; http://dx.doi.org/10.1038/227680a0; PMID: 5432063
   PubMed Web of Science ®Google Scholar