Ribosome biogenesis factors working with a nuclear envelope SUN domain protein

References

• Henras AK, Soudet J, Gérus M, Lebaron S, Caizergues-Ferrer M, Mougin A, et al. The post-transcriptional steps of eukaryotic ribosome biogenesis. Cell Mol Life Sci 2008; 65:2334 - 59; http://dx.doi.org/10.1007/s00018-008-8027-0; PMID: 18408888
   PubMed Web of Science ®Google Scholar
• Staley JP, Woolford JL Jr. Assembly of ribosomes and spliceosomes: complex ribonucleoprotein machines. Curr Opin Cell Biol 2009; 21:109 - 18; http://dx.doi.org/10.1016/j.ceb.2009.01.003; PMID: 19167202
   PubMed Web of Science ®Google Scholar
• Tschochner H, Hurt E. Pre-ribosomes on the road from the nucleolus to the cytoplasm. Trends Cell Biol 2003; 13:255 - 63; http://dx.doi.org/10.1016/S0962-8924(03)00054-0; PMID: 12742169
   PubMed Web of Science ®Google Scholar
• Panse VG, Johnson AW. Maturation of eukaryotic ribosomes: acquisition of functionality. Trends Biochem Sci 2010; 35:260 - 6; http://dx.doi.org/10.1016/j.tibs.2010.01.001; PMID: 20137954
   PubMed Web of Science ®Google Scholar
• Warner JR. The economics of ribosome biosynthesis in yeast. Trends Biochem Sci 1999; 24:437 - 40; http://dx.doi.org/10.1016/S0968-0004(99)01460-7; PMID: 10542411
   PubMed Web of Science ®Google Scholar
• Warner JR, McIntosh KB. How common are extraribosomal functions of ribosomal proteins?. Mol Cell 2009; 34:3 - 11; http://dx.doi.org/10.1016/j.molcel.2009.03.006; PMID: 19362532
   PubMed Web of Science ®Google Scholar
• Yamada H, Horigome C, Okada T, Shirai C, Mizuta K. Yeast Rrp14p is a nucleolar protein involved in both ribosome biogenesis and cell polarity. RNA 2007; 13:1977 - 87; http://dx.doi.org/10.1261/rna.553807; PMID: 17804645
   PubMed Web of Science ®Google Scholar
• Dez C, Tollervey D. Ribosome synthesis meets the cell cycle. Curr Opin Microbiol 2004; 7:631 - 7; http://dx.doi.org/10.1016/j.mib.2004.10.007; PMID: 15556036
   PubMed Web of Science ®Google Scholar
• Tsujii R, Miyoshi K, Tsuno A, Matsui Y, Toh-e A, Miyakawa T, et al. Ebp2p, yeast homologue of a human protein that interacts with Epstein-Barr virus Nuclear Antigen 1, is required for pre-rRNA processing and ribosomal subunit assembly. Genes Cells 2000; 5:543 - 53; http://dx.doi.org/10.1046/j.1365-2443.2000.00346.x; PMID: 10947841
   PubMed Web of Science ®Google Scholar
• Tsuno A, Miyoshi K, Tsujii R, Miyakawa T, Mizuta K. RRS1, a conserved essential gene, encodes a novel regulatory protein required for ribosome biogenesis in Saccharomyces cerevisiae.. Mol Cell Biol 2000; 20:2066 - 74; http://dx.doi.org/10.1128/MCB.20.6.2066-2074.2000; PMID: 10688653
   PubMed Web of Science ®Google Scholar
• Zhang J, Harnpicharnchai P, Jakovljevic J, Tang L, Guo Y, Oeffinger M, et al. Assembly factors Rpf2 and Rrs1 recruit 5S rRNA and ribosomal proteins rpL5 and rpL11 into nascent ribosomes. Genes Dev 2007; 21:2580 - 92; http://dx.doi.org/10.1101/gad.1569307; PMID: 17938242
   PubMed Web of Science ®Google Scholar
• Nariai M, Tanaka T, Okada T, Shirai C, Horigome C, Mizuta K. Synergistic defect in 60S ribosomal subunit assembly caused by a mutation of Rrs1p, a ribosomal protein L11-binding protein, and 3'-extension of 5S rRNA in Saccharomyces cerevisiae.. Nucleic Acids Res 2005; 33:4553 - 62; http://dx.doi.org/10.1093/nar/gki772; PMID: 16100378
   PubMed Web of Science ®Google Scholar
• Morita D, Miyoshi K, Matsui Y, Toh-e A, Shinkawa H, Miyakawa T, et al. Rpf2p, an evolutionarily conserved protein, interacts with ribosomal protein L11 and is essential for the processing of 27 SB Pre-rRNA to 25 S rRNA and the 60 S ribosomal subunit assembly in Saccharomyces cerevisiae. J Biol Chem 2002; 277:28780 - 6; http://dx.doi.org/10.1074/jbc.M203399200; PMID: 12048200
   PubMed Web of Science ®Google Scholar
• Huber MD, Dworet JH, Shire K, Frappier L, McAlear MA. The budding yeast homolog of the human EBNA1-binding protein 2 (Ebp2p) is an essential nucleolar protein required for pre-rRNA processing. J Biol Chem 2000; 275:28764 - 73; http://dx.doi.org/10.1074/jbc.M000594200; PMID: 10849420
   PubMed Web of Science ®Google Scholar
• Horigome C, Okada T, Shimazu K, Gasser SM, Mizuta K. Ribosome biogenesis factors bind a nuclear envelope SUN domain protein to cluster yeast telomeres. EMBO J 2011; 30:3799 - 811; http://dx.doi.org/10.1038/emboj.2011.267; PMID: 21822217
   PubMed Web of Science ®Google Scholar
• Miyoshi K, Shirai C, Horigome C, Takenami K, Kawasaki J, Mizuta K. Rrs1p, a ribosomal protein L11-binding protein, is required for nuclear export of the 60S pre-ribosomal subunit in Saccharomyces cerevisiae. FEBS Lett 2004; 565:106 - 10; http://dx.doi.org/10.1016/j.febslet.2004.03.087; PMID: 15135061
   PubMed Web of Science ®Google Scholar
• Horigome C, Okada T, Matsuki K, Mizuta K. A ribosome assembly factor Ebp2p, the yeast homologue of EBNA1-binding protein 2, is involved in the secretory response. Biosci Biotechnol Biochem 2008; 72:1080 - 6; http://dx.doi.org/10.1271/bbb.70817; PMID: 18391458
   PubMed Web of Science ®Google Scholar
• Miki F, Kurabayashi A, Tange Y, Okazaki K, Shimanuki M, Niwa O. Two-hybrid search for proteins that interact with Sad1 and Kms1, two membrane-bound components of the spindle pole body in fission yeast. Mol Genet Genomics 2004; 270:449 - 61; http://dx.doi.org/10.1007/s00438-003-0938-8; PMID: 14655046
   PubMed Web of Science ®Google Scholar
• Starr DA, Fridolfsson HN. Interactions between nuclei and the cytoskeleton are mediated by SUN-KASH nuclear-envelope bridges. Annu Rev Cell Dev Biol 2010; 26:421 - 44; http://dx.doi.org/10.1146/annurev-cellbio-100109-104037; PMID: 20507227
   PubMed Web of Science ®Google Scholar
• Jaspersen SL, Martin AE, Glazko G, Giddings TH Jr., Morgan G, Mushegian A, et al. The Sad1-UNC-84 homology domain in Mps3 interacts with Mps2 to connect the spindle pole body with the nuclear envelope. J Cell Biol 2006; 174:665 - 75; http://dx.doi.org/10.1083/jcb.200601062; PMID: 16923827
   PubMed Web of Science ®Google Scholar
• Schober H, Ferreira H, Kalck V, Gehlen LR, Gasser SM. Yeast telomerase and the SUN domain protein Mps3 anchor telomeres and repress subtelomeric recombination. Genes Dev 2009; 23:928 - 38; http://dx.doi.org/10.1101/gad.1787509; PMID: 19390087
   PubMed Web of Science ®Google Scholar
• Dahl KN, Scaffidi P, Islam MF, Yodh AG, Wilson KL, Misteli T. Distinct structural and mechanical properties of the nuclear lamina in Hutchinson-Gilford progeria syndrome. Proc Natl Acad Sci USA 2006; 103:10271 - 6; http://dx.doi.org/10.1073/pnas.0601058103; PMID: 16801550
   PubMed Web of Science ®Google Scholar
• Dauer WT, Worman HJ. The nuclear envelope as a signaling node in development and disease. Dev Cell 2009; 17:626 - 38; http://dx.doi.org/10.1016/j.devcel.2009.10.016; PMID: 19922868
   PubMed Web of Science ®Google Scholar
• Hediger F, Neumann FR, Van Houwe G, Dubrana K, Gasser SM. Live imaging of telomeres: yKu and Sir proteins define redundant telomere-anchoring pathways in yeast. Curr Biol 2002; 12:2076 - 89; http://dx.doi.org/10.1016/S0960-9822(02)01338-6; PMID: 12498682
   PubMed Web of Science ®Google Scholar
• Taddei A, Hediger F, Neumann FR, Bauer C, Gasser SM. Separation of silencing from perinuclear anchoring functions in yeast Ku80, Sir4 and Esc1 proteins. EMBO J 2004; 23:1301 - 12; http://dx.doi.org/10.1038/sj.emboj.7600144; PMID: 15014445
   PubMed Web of Science ®Google Scholar
• Ferreira HC, Luke B, Schober H, Kalck V, Lingner J, Gasser SM. The PIAS homologue Siz2 regulates perinuclear telomere position and telomerase activity in budding yeast. Nat Cell Biol 2011; 13:867 - 74; http://dx.doi.org/10.1038/ncb2263; PMID: 21666682
   PubMed Web of Science ®Google Scholar
• Ebrahimi H, Donaldson AD. Release of yeast telomeres from the nuclear periphery is triggered by replication and maintained by suppression of Ku-mediated anchoring. Genes Dev 2008; 22:3363 - 74; http://dx.doi.org/10.1101/gad.486208; PMID: 19056887
   PubMed Web of Science ®Google Scholar
• Hiraga S, Botsios S, Donaldson AD. Histone H3 lysine 56 acetylation by Rtt109 is crucial for chromosome positioning. J Cell Biol 2008; 183:641 - 51; http://dx.doi.org/10.1083/jcb.200806065; PMID: 19001125
   PubMed Web of Science ®Google Scholar
• Ruault M, De Meyer A, Loïodice I, Taddei A. Clustering heterochromatin: Sir3 promotes telomere clustering independently of silencing in yeast. J Cell Biol 2011; 192:417 - 31; http://dx.doi.org/10.1083/jcb.201008007; PMID: 21300849
   PubMed Web of Science ®Google Scholar
• Nagai S, Dubrana K, Tsai-Pflugfelder M, Davidson MB, Roberts TM, Brown GW, et al. Functional targeting of DNA damage to a nuclear pore-associated SUMO-dependent ubiquitin ligase. Science 2008; 322:597 - 602; http://dx.doi.org/10.1126/science.1162790; PMID: 18948542
   PubMed Web of Science ®Google Scholar
• Kalocsay M, Hiller NJ, Jentsch S. Chromosome-wide Rad51 spreading and SUMO-H2A.Z-dependent chromosome fixation in response to a persistent DNA double-strand break. Mol Cell 2009; 33:335 - 43; http://dx.doi.org/10.1016/j.molcel.2009.01.016; PMID: 19217407
   PubMed Web of Science ®Google Scholar
• Oza P, Jaspersen SL, Miele A, Dekker J, Peterson CL. Mechanisms that regulate localization of a DNA double-strand break to the nuclear periphery. Genes Dev 2009; 23:912 - 27; http://dx.doi.org/10.1101/gad.1782209; PMID: 19390086
   PubMed Web of Science ®Google Scholar
• Oza P, Peterson CL. Opening the DNA repair toolbox: localization of DNA double strand breaks to the nuclear periphery. Cell Cycle 2010; 9:43 - 9; http://dx.doi.org/10.4161/cc.9.1.10317; PMID: 20016273
   PubMed Web of Science ®Google Scholar
• Shirai C, Mizuta K. SUMO mediates interaction of Ebp2p, the yeast homolog of Epstein-Barr virus nuclear antigen 1-binding protein 2, with a RING finger protein Ris1p. Biosci Biotechnol Biochem 2008; 72:1881 - 6; http://dx.doi.org/10.1271/bbb.80131; PMID: 18603780
   PubMed Web of Science ®Google Scholar
• Panse VG, Kressler D, Pauli A, Petfalski E, Gnädig M, Tollervey D, et al. Formation and nuclear export of preribosomes are functionally linked to the small-ubiquitin-related modifier pathway. Traffic 2006; 7:1311 - 21; http://dx.doi.org/10.1111/j.1600-0854.2006.00471.x; PMID: 16978391
   PubMed Web of Science ®Google Scholar
• Mullen JR, Chen CF, Brill SJ. Wss1 is a SUMO-dependent isopeptidase that interacts genetically with the Slx5-Slx8 SUMO-targeted ubiquitin ligase. Mol Cell Biol 2010; 30:3737 - 48; http://dx.doi.org/10.1128/MCB.01649-09; PMID: 20516210
   PubMed Web of Science ®Google Scholar
• Mullen JR, Das M, Brill SJ. Genetic evidence that polysumoylation bypasses the need for a SUMO-targeted Ub ligase. Genetics 2011; 187:73 - 87; http://dx.doi.org/10.1534/genetics.110.124347; PMID: 21059884
   PubMed Web of Science ®Google Scholar
• Scherl A, Couté Y, Déon C, Callé A, Kindbeiter K, Sanchez JC, et al. Functional proteomic analysis of human nucleolus. Mol Biol Cell 2002; 13:4100 - 9; http://dx.doi.org/10.1091/mbc.E02-05-0271; PMID: 12429849
   PubMed Web of Science ®Google Scholar
• Gambe AE, Matsunaga S, Takata H, Ono-Maniwa R, Baba A, Uchiyama S, et al. A nucleolar protein RRS1 contributes to chromosome congression. FEBS Lett 2009; 583:1951 - 6; http://dx.doi.org/10.1016/j.febslet.2009.05.033; PMID: 19465021
   PubMed Web of Science ®Google Scholar
• Romanova L, Grand A, Zhang L, Rayner S, Katoku-Kikyo N, Kellner S, et al. Critical role of nucleostemin in pre-rRNA processing. J Biol Chem 2009; 284:4968 - 77; http://dx.doi.org/10.1074/jbc.M804594200; PMID: 19106111
   PubMed Web of Science ®Google Scholar
• Kapoor P, Frappier L. EBNA1 partitions Epstein-Barr virus plasmids in yeast cells by attaching to human EBNA1-binding protein 2 on mitotic chromosomes. J Virol 2003; 77:6946 - 56; http://dx.doi.org/10.1128/JVI.77.12.6946-6956.2003; PMID: 12768013
   PubMed Web of Science ®Google Scholar
• Nayyar VK, Shire K, Frappier L. Mitotic chromosome interactions of Epstein-Barr nuclear antigen 1 (EBNA1) and human EBNA1-binding protein 2 (EBP2). J Cell Sci 2009; 122:4341 - 50; http://dx.doi.org/10.1242/jcs.060913; PMID: 19887584
   PubMed Web of Science ®Google Scholar
• Wang Q, Du X, Cai Z, Greene MI. Characterization of the structures involved in localization of the SUN proteins to the nuclear envelope and the centrosome. DNA Cell Biol 2006; 25:554 - 62; http://dx.doi.org/10.1089/dna.2006.25.554; PMID: 17132086
   PubMed Web of Science ®Google Scholar
• Chi YH, Haller K, Peloponese JM Jr., Jeang KT. Histone acetyltransferase hALP and nuclear membrane protein hsSUN1 function in de-condensation of mitotic chromosomes. J Biol Chem 2007; 282:27447 - 58; http://dx.doi.org/10.1074/jbc.M703098200; PMID: 17631499
   PubMed Web of Science ®Google Scholar
• Hirano Y, Ishii K, Kumeta M, Furukawa K, Takeyasu K, Horigome T. Proteomic and targeted analytical identification of BXDC1 and EBNA1BP2 as dynamic scaffold proteins in the nucleolus. Genes Cells 2009; 14:155 - 66; http://dx.doi.org/10.1111/j.1365-2443.2008.01262.x; PMID: 19170763
   PubMed Web of Science ®Google Scholar
• Gasser SM, Amati BB, Cardenas ME, Hofmann JF. Studies on scaffold attachment sites and their relation to genome function. Int Rev Cytol 1989; 119:57 - 96; http://dx.doi.org/10.1016/S0074-7696(08)60649-X; PMID: 2695485
   PubMed Web of Science ®Google Scholar
• Fey EG, Krochmalnic G, Penman S. The nonchromatin substructures of the nucleus: the ribonucleoprotein (RNP)-containing and RNP-depleted matrices analyzed by sequential fractionation and resinless section electron microscopy. J Cell Biol 1986; 102:1654 - 65; http://dx.doi.org/10.1083/jcb.102.5.1654; PMID: 3700470
   PubMed Web of Science ®Google Scholar
• Parfenov VN, Davis DS, Pochukalina GN, Sample CE, Bugaeva EA, Murti KG. Nuclear actin filaments and their topological changes in frog oocytes. Exp Cell Res 1995; 217:385 - 94; http://dx.doi.org/10.1006/excr.1995.1101; PMID: 7698240
   PubMed Web of Science ®Google Scholar
• Kiseleva E, Drummond SP, Goldberg MW, Rutherford SA, Allen TD, Wilson KL. Actin- and protein-4.1-containing filaments link nuclear pore complexes to subnuclear organelles in Xenopus oocyte nuclei. J Cell Sci 2004; 117:2481 - 90; http://dx.doi.org/10.1242/jcs.01098; PMID: 15128868
   PubMed Web of Science ®Google Scholar
• Martin C, Chen S, Maya-Mendoza A, Lovric J, Sims PF, Jackson DA. Lamin B1 maintains the functional plasticity of nucleoli. J Cell Sci 2009; 122:1551 - 62; http://dx.doi.org/10.1242/jcs.046284; PMID: 19383719
   PubMed Web of Science ®Google Scholar
• Mekhail K, Seebacher J, Gygi SP, Moazed D. Role for perinuclear chromosome tethering in maintenance of genome stability. Nature 2008; 456:667 - 70; http://dx.doi.org/10.1038/nature07460; PMID: 18997772
   PubMed Web of Science ®Google Scholar
• Grund SE, Fischer T, Cabal GG, Antúnez O, Pérez-Ortín JE, Hurt E. The inner nuclear membrane protein Src1 associates with subtelomeric genes and alters their regulated gene expression. J Cell Biol 2008; 182:897 - 910; http://dx.doi.org/10.1083/jcb.200803098; PMID: 18762579
   PubMed Web of Science ®Google Scholar