References
- Hayward AC. Swings JG, Civerolo EL. The host of Xanthomonas. Xanthomonas 1993; London Chapman and Hall 51 - 54
- da Silva AC, Ferro JA, Reinach FC, Farah CS, Furlan LR, Quaggio RB, et al. Comparison of the genomes of two Xanthomonas pathogens with differing host specificities. Nature 2002; 417:459 - 463
- Qian W, Jia Y, Ren SX, He YQ, Feng JX, Lu LF, et al. Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris. Genome Res 2005; 15:757 - 767
- Vorhölter FJ, Schneiker S, Goesmann A, Krause L, Bekel T, Kaiser O, et al. The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis. J Biotechnol 2008; 134:33 - 45
- Gottesman S, Storz G. Bacterial Small RNA Regulators: Versatile Roles and Rapidly Evolving Variations. Cold Spring Harb Perspect Biol 2010; 2:3798
- Papenfort K, Vogel J. Regulatory RNA in bacterial pathogens. Cell Host Microbe 2010; 8:116 - 127
- Waters LS, Storz G. Regulatory RNAs in bacteria. Cell 2009; 136:615 - 628
- Findeiss S, Schmidtke C, Stadler PF, Bonas U. A novel family of plasmid-transferred anti-sense ncRNAs. RNA Biol 2010; 7:120 - 124
- Jiang RP, Tang DJ, Chen XL, He YQ, Feng JX, Jiang BL, et al. Identification of four novel small non-coding RNAs from Xanthomonas campestris pathovar campestris. BMC Genomics 2010; 11:316
- Liang H, Zhao YT, Zhang JQ, Wang XJ, Fang RX, Jia YT. Identification and functional characterization of small non-coding RNAs in Xanthomonas oryzae pathovar oryzae. BMC Genomics 2011; 12:87
- Ochman H, Lawrence JG, Groisman EA. Lateral gene transfer and the nature of bacterial innovation. Nature 2000; 405:299 - 304
- Holmes AJ, Gillings MR, Nield BS, Mabbutt BC, Nevalainen KM, Stokes HW. The gene cassette metagenome is a basic resource for bacterial genome evolution. Environ Microbiol 2003; 5:383 - 394
- Mazel D. Integrons: agents of bacterial evolution. Nat Rev Microbiol 2006; 4:608 - 620
- Cambray G, Guerout AM, Mazel D. Integrons. Annu Rev Genet 2010; 44:141 - 166
- Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol 1990; 215:403 - 410
- Gardner PP, Daub J, Tate JG, Nawrocki EP, Kolbe DL, Lindgreen S, et al. Rfam: updates to the RNA families database. Nucleic Acids Res 2009; 37:136 - 140
- Gardner PP, Daub J, Tate J, Moore BL, Osuch IH, Griffiths-Jones S, et al. Rfam: Wikipedia, clans and the “decimal” release. Nucleic Acids Res 2011; 39:141 - 145
- Tan HM, Tang HY, Joannou CL, Abdel-Wahab NH, Mason JR. The Pseudomonas putida ML2 plasmidencoded genes for benzene dioxygenase are unusual in codon usage and low in G+C content. Gene 1993; 130:33 - 39
- Gillings MR, Holley MP, Stokes HW, Holmes AJ. Integrons in Xanthomonas: a source of species genome diversity. Proc Natl Acad Sci USA 2005; 102:4419 - 4424
- Wengelnik KG, Van den Ackerveken, Bonas U. HrpG, a key hrp regulatory protein of Xanthomonas campestris pv. vesicatoria is homologous to two-component response regulators. Mol Plant-Microbe Interact 1996; 9:704 - 712
- Wengelnik K, Bonas U. HrpXv, an AraC-type regulator, activates expression of five of the six loci in the hrp cluster of Xanthomonas campestris pv. vesicatoria. J. Bacteriol 1996; 178:3462 - 3469
- Huang DL, Tang DJ, Liao Q, Li XQ, He YQ, Feng JX, et al. The Zur of Xanthomonas campestris is involved in hypersensitive response and positively regulates the expression of hrp cluster via hrpX but not hrpG. Mol Plant-Microbe Interact 2009; 22:321 - 329
- Koebnik R, Krüger A, Thieme F, Urban A, Bonas U. Specific binding of the Xanthomonas campestris pv. vesicatoria AraC-type transcriptional activator HrpX to plant-inducible promoter boxes. J Bacteriol 2006; 188:7652 - 7660
- Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, et al. Clustal W and Clustal X version 2.0. Bioinformatics 2007; 23:2947 - 2948
- Bernhart SH, Hofacker IL, Will S, Gruber AR, Stadler PF. RNAalifold: improved consensus structure prediction for RNA alignments. BMC Bioinformatics 2008; 9:474
- Miller JH. Experiments in Molecular Genetics 1972; New York Cold Spring Harbour Laboratory Press
- Rochester DE, Winer JA, Shah DM. The structure and expression of maize genes encoding the major heat-shock protein, Hsp70. EMBO J 1986; 5:451 - 458