ITS Primers with Enhanced Specificity to Detect the Ectomycorrhizal Fungi in the Roots of Wood Plants

References

• Agerer, R. 1991. Color Atlas of Ectomycorrhizae. Einhorn-Verlag Edward Dietenberger.
   Google Scholar
• Amicucci, A., Zambonelli, A., Giomaro, G., Potenza, L. and Stocchi, V. 1998. Identification of ectomycorrhizal fungi of the genus Tuber by species-specific ITS primers. Mol. Ecol. 7: 273–277.
   Google Scholar
• Barker, S. J., Tagu, D. and Delp, G. 1998. Regulation of root and fungal morphogenesis in mycorrhizal symbioses. Plant Physiol. 116: 1201–1207.
   Google Scholar
• Breitenbach, J. and Kranzlin, F. 1984. Fungi of Switzerland. Vol. 1. Mykologia. Luzern. 310p.
   Google Scholar
• Bruns, T. D., Vilgalys, R., Barns, S. M., Gonzalez, D., Hibbett, D. S., Lane, D. J., Simon, L., Stickel, S., Szaro, T. M., Weisburg, W. G. and Sogin, M. L. 1993. Evolutionary relationships within the fungi: analysis of nuclear small subunit rRNA sequences. Molecular Phylogenetics and Evolution 1: 231–241.
   Google Scholar
• Chung, H. C., Kim, D. H. and Lee, S. S. 2002. Mycorrhizal formations and seedling growth of Pinus densiflora by in vitro synthesis with the inoculations of ectomycorrhizal fungi. Mycobiology 30: 70–75.
   Google Scholar
• Egger, K. N. 1995. Molecular analysis of ectomycorrhizal fungal communities. Can. J. Bot. 77: 11–21.
   Google Scholar
• Gardes, M. and Bruns, T. D. 1993. ITS primers with enhanced specificity for basidiomycetes-Application to the identification of mycorrhizae and rusts. Mol. Ecol. 2: 113–118.
   Google Scholar
• Gardes, M. and Bruns, T. D. 1996. ITS-RFLP matching for identification of fungi. Pp. 177–186. In: Methods in Molecular Biology: Species Diagnostics Protocols. Vol. 50. Ed. Uumana Press. Totowa. NJ.
   Google Scholar
• Gardes, M., White, T. J., Fortin, J. A., Bruns, T. D. and Taylor, J. W. 1991. Identification of indigenous and introduced symbiotic fungi in ectomycorrhizae by amplification of nuclear and mitochondrial ribosomal DNA. Can. J. Bot. 69: 180–190.
   Google Scholar
• Gehrig, H., Schussler, A. and Kluge, M. 1995. Geosiphon pyriforme, a fungus forming endocytobiosis with Nostoc (Cyanobacteria) is an ancestral member of the Glomales: Evidence by SSU rRNA analysis. J. Mol. Evol. 43: 71–81.
   Google Scholar
• Harley, J. L. and Smith, S. E. 1983. Mycorrhizal symbiosis. Academic Press, London. UK.
   Google Scholar
• Horton, T. R. and Bruns, T. D. 2001. The molecular revolution in ectomycorrhizal ecology: peeking into the black-box. Molecular Ecology 10: 1855–1871.
   Google Scholar
• Isaac, S. 1992. Fungal-plant interaction. Chapman & Hall. Cambridge, UK. ISBN 0–412-36470–0.
   Google Scholar
• Johannesson, H., Ryman, S. and Myrold, D. D. 1999. Sarcodon imbricatus and S. squamosus: Two confused species. Mycol. Res. 103(11): 1447–1452.
   Google Scholar
• Kikuchi, K., Matsushita, N., Guerin-Laguette, A., Ohta, A. and Suzuki, K. 2000. Detection of Tricholoma matsutake by specific ITS primers. Mycol. Res. 104: 1427–1430.
   Google Scholar
• Lee, J. Y 1988. Coloured Korean Mushroom. Academic Press.
   Google Scholar
• Lee, S. S. 1991. Biology of Tricholoma matsutake found at Pinus densiflora communities in the areas of Kyoung Sang Do. Mycobiology 19: 203 – 213.
   Google Scholar
• Lee, S. S. and Hong, S. W. 1998. The 18s rDNA sequences of the basidiocarps of Tricholoma matsutake in Korea. Mycobiology 26: 256–264.
   Google Scholar
• Lee, S. S. and Hong, S. W., Chung, H. C., Sung, C. K., Kim, J. H., Ka, K. H. and Kim, H. J. 1999. The specific probes confirming the genomic DNA of Tricholoma matsutake in Korea. Mycobiology 27: 20–26.
   Google Scholar
• Lee, S. S., Chung, H. C. and Kim, D. H. 2000a. Observations on the ectomycorrhizal roots collected from the bases of the basiodiocarps in Chungbuk. Mycobiology 28: 62–70.
   Google Scholar
• Lee, S. S., Chung, H. C. and Kim, D. H. 2000b. Observations of the ectomycorrhizal roots collected from the bases of the edible basidiocarps around the WolAk Mountains. Mycobiology 28: 27–32.
   Google Scholar
• Lee, S. S. and You, J. H. 2000. Identification of the orchid mycorrhizal fungi isolated from the roots of Korean Native Orchid. Mycobiology 28: 17–26.
   Google Scholar
• Lincoff, G. H. 1997. Field guide to North American Mushroom. Alfred A. Knopf, Inc.
   Google Scholar
• Martin, F. and Tagu, D. 1999. Developmental biology of a plant-fungus symbiosis: the ectomycorrhiza. Pp. 51–73. In: Varma, A, Hock, B. (eds.), Mycorrhiza. 2nd eds. Springer-Verlag Berlin Heidelberg New York.
   Google Scholar
• Matsuda, Y. and Hijii, N. 1999. Ectomycorrhizae morphotypes of naturally grown Abies firma seedlings. Mycoscience 40: 217–226.
   Google Scholar
• Miller, O. K. 1997. Field guide to North American Mushroom. Alfred A. Knopf, Inc.
   Google Scholar
• Pacioni, G. and Lincoff, G. 1981. Simon and Schuster’s guide to mushrooms. Simon & Shuster Inc. New York, USA.
   Google Scholar
• Park, W. H. and Lee, H. D. 1996. Wild Fungi of Korea in Color. Kyo-Hak Publishing Co. Seoul. Korea.
   Google Scholar
• Pritsch, K., Boyle, H., Munch, J. C and Buscot, F. 1997. Characterization and identification of black alder mycorrhizas by PCR/RFLP analysis of the rDNA internal transcribed spacer (ITS). New Phytol. 137: 357–369.
   Google Scholar
• Saitou, N. and Nei, M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 4: 406–425.
   Google Scholar
• Smith, A. H. and Smith, N. W. 1980. The Mushroom Hunter’s Field Guide. Ann Arbor, University of Michigan Press.
   Google Scholar
• Smith, S. E. and Read, D. J. 1997. Mycorrhizal Symbiosis. Academic Press. see Pp. 267–295.
   Google Scholar
• Tae, M. S., Eom, A. H. and Lee, S. S. 2002. Sequence analyses of PCR amplified partial SSU of Ribosomal DNA for Identifying Arbuscular Mycorrhizsa Fungi in Plant roots. Mycobiology 30: 13–17.
   Google Scholar
• Thompson, J. D., Higgins, D. G. and Gibson, T. J. 1994. Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acid Research 22: 4673–4680.
   Google Scholar
• Tibett, M., Sanders, F. E., Minto, S. J., Dowell, M. and Cairney, Y. 1998. Utilization of organic nitrogen by ectomycorrhizal fungi (Hebeloma spp.) of arctic and temperate origin. Mycol. Res. 102: 1525–1532.
   Google Scholar
• White, T. J., Bruns, T. D., Lee, S. and Taylor, J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. Pp. 315–322. In: Innis, M. A., Gelfand, D. H., Sninsky, J. J. and White T. J. eds. PCR Protocols: a Guide to Methods and Applications. Academic Press. New York.
   Google Scholar