Journal of Biomolecular Structure and Dynamics, Volume 30, Issue 5 (2012)

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Journal of Biomolecular Structure and Dynamics, Volume 30, Issue 5 (2012)

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Articles

Article
Structural dynamics of double-helical RNAs composed of CUG/CUG- and CUG/CGG-repeats
Jevgenia Tamjar, Elizaveta Katorcha, Alexander Popov & Lucy Malinina
Pages: 505-523
Published online: 25 Jun 2012
AbstractforStructural dynamics of double-helical RNAs composed of CUG/CUG- and CUG/CGG-repeats | Full Text | References | PDF (1.7 MB)
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Article
Coexistence of G-quadruplex and duplex domains within the secondary structure of 31-mer DNA thrombin-binding aptamer
N.G. Dolinnaya, A.V. Yuminova, V.A. Spiridonova, A.M. Arutyunyan & A.M. Kopylov
Pages: 524-531
Published online: 26 Jun 2012
AbstractforCoexistence of G-quadruplex and duplex domains within the secondary structure of 31-mer DNA thrombin-binding aptamer | Full Text | References | PDF (254.2 KB)
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Article
Cold shock domain protein from Philosamia ricini prefers single-stranded nucleic acids binding
Ashutosh Mani, P.K Yadava & Dwijendra K. Gupta
Pages: 532-541
Published online: 26 Jun 2012
AbstractforCold shock domain protein from Philosamia ricini prefers single-stranded nucleic acids binding | Full Text | References | PDF (644.5 KB)
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Article
Structural phylogenomics uncovers the early and concurrent origins of cysteine biosynthesis and iron-sulfur proteins
Hong-Yu Zhang, Tao Qin, Ying-Ying Jiang & Gustavo Caetano-Anollés
Pages: 542-545
Published online: 25 Jun 2012
AbstractforStructural phylogenomics uncovers the early and concurrent origins of cysteine biosynthesis and iron-sulfur proteins | Full Text | References | PDF (104.8 KB) | Supplemental
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Article
First principles calculations of thermodynamics and kinetic parameters and molecular dynamics simulations of acetylcholinesterase reactivators: can mouse data provide new insights into humans?
Karina S. Matos, Elaine F.F. da Cunha, Arlan da Silva Gonçalves, Alan Wilter, Kamil Kuča, Tanos C.C. França & Teodorico C. Ramalho
Pages: 546-558
Published online: 25 Jun 2012
AbstractforFirst principles calculations of thermodynamics and kinetic parameters and molecular dynamics simulations of acetylcholinesterase reactivators: can mouse data provide new insights into humans? | Full Text | References | PDF (871.4 KB)
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Article
Structural insight into the mechanism of epothilone A bound to beta-tubulin and its mutants at Arg282Gln and Thr274Ile
Guojun Shi, Yue Wang, Yi Jin, Shaoming Chi, Qiang Shi, Maofa Ge, Shu Wang, Xingkang Zhang & Sichuan Xu
Pages: 559-573
Published online: 25 Jun 2012
AbstractforStructural insight into the mechanism of epothilone A bound to beta-tubulin and its mutants at Arg282Gln and Thr274Ile | Full Text | References | PDF (1.4 MB)
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Article
Comparative structural analysis of two proteins belonging to quorum sensing system in Vibrio cholerae
Mobashar Hussain Urf Turabe Fazil, Sunil Kumar, Naidu Subba Rao, Chandrabose Selvaraj, Sanjeev Kumar Singh, Haushila Prasad Pandey & Durg Vijai Singh
Pages: 574-584
Published online: 26 Jun 2012
AbstractforComparative structural analysis of two proteins belonging to quorum sensing system in Vibrio cholerae | Full Text | References | PDF (445.8 KB) | Supplemental
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Article
The role of residue S139 of mandelate racemase: synergistic effect of S139 and E317 on transition state stabilization
Jiali Gu & Hongwei Yu
Pages: 585-593
Published online: 26 Jun 2012
AbstractforThe role of residue S139 of mandelate racemase: synergistic effect of S139 and E317 on transition state stabilization | Full Text | References | PDF (328.4 KB)
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Article
Inhibition of protein–protein interaction of HER2–EGFR and HER2–HER3 by a rationally designed peptidomimetic
Sashikanth Banappagari, Miriam Corti, Seth Pincus & Seetharama Satyanarayanajois
Pages: 594-606
Published online: 26 Jun 2012
AbstractforInhibition of protein–protein interaction of HER2–EGFR and HER2–HER3 by a rationally designed peptidomimetic | Full Text | References | PDF (440.4 KB) | Supplemental
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Short Review

Article
Protein structure prediction: challenging targets for CASP10
Ashish Runthala
Pages: 607-615
Published online: 26 Jun 2012
AbstractforProtein structure prediction: challenging targets for CASP10 | Full Text | References | PDF (116.9 KB)
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