Journal of Biomolecular Structure and Dynamics, Volume 35, Issue 14 (2017)

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Journal of Biomolecular Structure and Dynamics, Volume 35, Issue 14 (2017)

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Letter to the Editor

Letter
Insights into the structural integrity and dynamics of siRNA–PAZ complex
Richa Anand & B.S. Sanjeev
Pages: 2987-2996
Published online: 23 Nov 2016
First Page PreviewforInsights into the structural integrity and dynamics of siRNA–PAZ complex | Full Text | References | PDF (6.7 MB) | Supplemental
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Research Articles

Article
Effect of seven Indian plant extracts on Fenton reaction-mediated damage to DNA constituents
Indrani Kar & Rajagopal Chattopadhyaya
Pages: 2997-3011
Published online: 10 Nov 2016
AbstractforEffect of seven Indian plant extracts on Fenton reaction-mediated damage to DNA constituents | Full Text | References | PDF (1.2 MB) | Supplemental
  • 163 Views
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Article
Probing the interaction of thionine with human serum albumin by multispectroscopic studies and its in vitro cytotoxic activity toward MCF-7 breast cancer cells
Perumal Manivel, Manickam Paulpandi, Kadarkarai Murugan, Giovanni Benelli & Malaichamy Ilanchelian
Pages: 3012-3031
Published online: 27 Oct 2016
AbstractforProbing the interaction of thionine with human serum albumin by multispectroscopic studies and its in vitro cytotoxic activity toward MCF-7 breast cancer cells | Full Text | References | PDF (4.6 MB) | Supplemental
  • 181 Views
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Article
Structural and biophysical properties of h-FANCI ARM repeat protein
Mohd. Quadir Siddiqui, Rajan Kumar Choudhary, Pankaj Thapa, Neha Kulkarni, Yogendra S. Rajpurohit, Hari S. Misra, Nikhil Gadewal, Satish Kumar, Syed K. Hasan & Ashok K. Varma
Pages: 3032-3042
Published online: 10 Nov 2016
AbstractforStructural and biophysical properties of h-FANCI ARM repeat protein | Full Text | References | PDF (3 MB) | Supplemental
  • 232 Views
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Article
Ligand-based and e-pharmacophore modeling, 3D-QSAR and hierarchical virtual screening to identify dual inhibitors of spleen tyrosine kinase (Syk) and janus kinase 3 (JAK3)
Maninder Kaur & Om Silakari
Pages: 3043-3060
Published online: 11 Nov 2016
AbstractforLigand-based and e-pharmacophore modeling, 3D-QSAR and hierarchical virtual screening to identify dual inhibitors of spleen tyrosine kinase (Syk) and janus kinase 3 (JAK3) | Full Text | References | PDF (4.3 MB) | Supplemental
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Letter to the Editor

Letter
In vitro glycation of bovine liver catalase by glucose and fructose and antigycation effects of aspirin: a spectroscopic study
Bahareh Koohshekan & Adeleh Divsalar
Pages: 3061-3069
Published online: 11 Oct 2016
First Page PreviewforIn vitro glycation of bovine liver catalase by glucose and fructose and antigycation effects of aspirin: a spectroscopic study | Full Text | References | PDF (489.1 KB) | Supplemental
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Research Articles

Article
A real-time study of the interaction of TBP with a TATA box-containing duplex identical to an ancestral or minor allele of human gene LEP or TPI
Olga Arkova, Nikita Kuznetsov, Olga Fedorova & Ludmila Savinkova
Pages: 3070-3081
Published online: 25 Oct 2016
AbstractforA real-time study of the interaction of TBP with a TATA box-containing duplex identical to an ancestral or minor allele of human gene LEP or TPI | Full Text | References | PDF (2.7 MB) | Supplemental
  • 137 Views
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Article
Plant derived anti-cancerous secondary metabolites as multipronged inhibitor of COX, Topo, and aromatase: molecular modeling and dynamics simulation analyses
Swati Singh, Manika Awasthi, Veda P. Pandey & Upendra N. Dwivedi
Pages: 3082-3097
Published online: 01 Nov 2016
AbstractforPlant derived anti-cancerous secondary metabolites as multipronged inhibitor of COX, Topo, and aromatase: molecular modeling and dynamics simulation analyses | Full Text | References | PDF (2.2 MB) | Supplemental
  • 268 Views
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Article
Assessment of the interaction procedure between Pt(IV) prodrug [Pt(5,5′-dmbpy)Cl4 and human serum albumin: Combination of spectroscopic and molecular modeling technique
Somaye Shahraki, Maryam Saeidifar, Fereshteh Shiri & Ameneh Heidari
Pages: 3098-3106
Published online: 21 Oct 2016
AbstractforAssessment of the interaction procedure between Pt(IV) prodrug [Pt(5,5′-dmbpy)Cl4 and human serum albumin: Combination of spectroscopic and molecular modeling technique | Full Text | References | PDF (1.4 MB)
  • 161 Views
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Article
Isolation of a transcription factor DREB1A gene from Phaseolus vulgaris and computational insights into its characterization: protein modeling, docking and mutagenesis
Recep Vatansever, Mehmet Emin Uras, Ugur Sen, Ibrahim Ilker Ozyigit & Ertugrul Filiz
Pages: 3107-3118
Published online: 14 Oct 2016
AbstractforIsolation of a transcription factor DREB1A gene from Phaseolus vulgaris and computational insights into its characterization: protein modeling, docking and mutagenesis | Full Text | References | PDF (4.6 MB) | Supplemental
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Article
Design of novel lead molecules against RhoG protein as cancer target – a computational study
Thirupathi Dasari, Bhargavi Kondagari, Ramasree Dulapalli, Aboubakr Haredi Abdelmonsef, Thirupathi Mukkera, Lavanya Souda Padmarao, Vasavi Malkhed & Uma Vuruputuri
Pages: 3119-3139
Published online: 04 Nov 2016
AbstractforDesign of novel lead molecules against RhoG protein as cancer target – a computational study | Full Text | References | PDF (15.8 MB)
  • 289 Views
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Article
Exploring stereochemical specificity of phosphotriesterase by MM-PBSA and MM-GBSA calculation and steered molecular dynamics simulation
Jingxuan Zhu, Xin Li, Siqi Zhang, Hen Ye, Hui Zhao, Hanyong Jin & Weiwei Han
Pages: 3140-3151
Published online: 28 Oct 2016
AbstractforExploring stereochemical specificity of phosphotriesterase by MM-PBSA and MM-GBSA calculation and steered molecular dynamics simulation | Full Text | References | PDF (2.4 MB) | Supplemental
  • 282 Views
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Article
Hydrodynamic description of protein folding: the decrease of the probability fluxes as an indicator of transition states in two-state folders
Andrey Yu. Palyanov & Sergei F. Chekmarev
Pages: 3152-3160
Published online: 07 Nov 2016
AbstractforHydrodynamic description of protein folding: the decrease of the probability fluxes as an indicator of transition states in two-state folders | Full Text | References | PDF (1.1 MB)
  • 88 Views
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Article
Quenching of fluorescence by meclizine, a probe study for structural and conformational changes in human serum albumin
Girish G. Ariga, Praveen N. Naik, Sharanappa T. Nandibewoor & Shivamurti A. Chimatadar
Pages: 3161-3175
Published online: 10 Nov 2016
AbstractforQuenching of fluorescence by meclizine, a probe study for structural and conformational changes in human serum albumin | Full Text | References | PDF (2.3 MB)
  • 161 Views
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Letter to the Editor

Letter
An in vitro study of the role of docosahexaenoic acid in human tau protein aggregation
Elham Sadat Mostafavi, Mohammad Ali Nasiri Khalili, Sirus Khodadadi & Gholam Hossein Riazi
Pages: 3176-3181
Published online: 07 Nov 2016
First Page PreviewforAn in vitro study of the role of docosahexaenoic acid in human tau protein aggregation | Full Text | References | PDF (1.2 MB)
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Research Articles

Article
Study on the interaction of taiwaniaquinoids with FTO by spectroscopy and molecular modeling
Ting Ren, Lijiao Zhang, Jinqian Wang, Chuanjun Song, Ruiyong Wang & Junbiao Chang
Pages: 3182-3193
Published online: 28 Oct 2016
AbstractforStudy on the interaction of taiwaniaquinoids with FTO by spectroscopy and molecular modeling | Full Text | References | PDF (1.6 MB)
  • 112 Views
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Article
Evaluation of human microtubule affinity-regulating kinase 4 inhibitors: fluorescence binding studies, enzyme, and cell assays
Farha Naz, Neha Sami, Abu Turab Naqvi, Asimul Islam, Faizan Ahmad & Md. Imtaiyaz Hassan
Pages: 3194-3203
Published online: 03 Nov 2016
AbstractforEvaluation of human microtubule affinity-regulating kinase 4 inhibitors: fluorescence binding studies, enzyme, and cell assays | Full Text | References | PDF (1.2 MB)
  • 209 Views
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