Molecular and Cellular Biology, Volume 25, Issue 22 (2005)

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Molecular and Cellular Biology, Volume 25, Issue 22 (2005)

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Gene Expression

Article
Interleukin-21 Receptor Gene Induction in Human T Cells Is Mediated by T-Cell Receptor-Induced Sp1 Activity
Zheng Wu, Hyoung-Pyo Kim, Hai-Hui Xue, Hong Liu, Keji Zhao & Warren J. Leonard
Pages: 9741-9752
Published online: 27 Mar 2023
AbstractforInterleukin-21 Receptor Gene Induction in Human T Cells Is Mediated by T-Cell Receptor-Induced Sp1 Activity | Full Text | References | PDF (644.9 KB)
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Article
p38 Mitogen-Activated Protein Kinase/Hog1p Regulates Translation of the AU-Rich-Element-Bearing MFA2 Transcript
Shobha Vasudevan, Nicole Garneau, Danny Tu Khounh & Stuart W. Peltz
Pages: 9753-9763
Published online: 27 Mar 2023
Abstractforp38 Mitogen-Activated Protein Kinase/Hog1p Regulates Translation of the AU-Rich-Element-Bearing MFA2 Transcript | Full Text | References | PDF (377.6 KB)
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Article
Scavenger Decapping Activity Facilitates 5′ to 3′ mRNA Decay
Hudan Liu & Megerditch Kiledjian
Pages: 9764-9772
Published online: 27 Mar 2023
AbstractforScavenger Decapping Activity Facilitates 5′ to 3′ mRNA Decay | Full Text | References | PDF (282.5 KB)
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Article
Convergence of Protein Kinase C and JAK-STAT Signaling on Transcription Factor GATA-4
Jun Wang, Pierre Paradis, Anne Aries, Hiba Komati, Chantal Lefebvre, Hao Wang & Mona Nemer
Pages: 9829-9844
Published online: 27 Mar 2023
AbstractforConvergence of Protein Kinase C and JAK-STAT Signaling on Transcription Factor GATA-4 | Full Text | References | PDF (765.6 KB)
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Article
The Novel ATP-Binding Cassette Protein ARB1 Is a Shuttling Factor That Stimulates 40S and 60S Ribosome Biogenesis
Jinsheng Dong, Ruby Lai, Jennifer L. Jennings, Andrew J. Link & Alan G. Hinnebusch
Pages: 9859-9873
Published online: 27 Mar 2023
AbstractforThe Novel ATP-Binding Cassette Protein ARB1 Is a Shuttling Factor That Stimulates 40S and 60S Ribosome Biogenesis | Full Text | References | PDF (650.7 KB) | Supplemental
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Article
Smooth Muscle-Specific Genes Are Differentially Sensitive to Inhibition by Elk-1
Jiliang Zhou, Guoqing Hu & B. Paul Herring
Pages: 9874-9885
Published online: 27 Mar 2023
AbstractforSmooth Muscle-Specific Genes Are Differentially Sensitive to Inhibition by Elk-1 | Full Text | References | PDF (678.7 KB)
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Article
Protein Phosphatase 5 Is Required for ATR-Mediated Checkpoint Activation
Ji Zhang, Shideng Bao, Ryohei Furumai, Katerina S. Kucera, Ambereen Ali, Nicolas M. Dean & Xiao-Fan Wang
Pages: 9910-9919
Published online: 27 Mar 2023
AbstractforProtein Phosphatase 5 Is Required for ATR-Mediated Checkpoint Activation | Full Text | References | PDF (603.5 KB)
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Article
The DnaJ-Related Factor Mrj Interacts with Nuclear Factor of Activated T Cells c3 and Mediates Transcriptional Repression through Class II Histone Deacetylase Recruitment
Yan-Shan Dai, Jian Xu & Jeffery D. Molkentin
Pages: 9936-9948
Published online: 27 Mar 2023
AbstractforThe DnaJ-Related Factor Mrj Interacts with Nuclear Factor of Activated T Cells c3 and Mediates Transcriptional Repression through Class II Histone Deacetylase Recruitment | Full Text | References | PDF (624.2 KB)
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Article
Menin Is a Regulator of the Stress Response in Drosophila melanogaster
Maria Papaconstantinou, Ying Wu, Hendrik Nikolaas Pretorius, Nishi Singh, Gabriella Gianfelice, Robert M. Tanguay, Ana Regina Campos & Pierre-André Bédard
Pages: 9960-9972
Published online: 27 Mar 2023
AbstractforMenin Is a Regulator of the Stress Response in Drosophila melanogaster | Full Text | References | PDF (893.6 KB)
  • 39 Views
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Article
Cyclin D3 Promotes Adipogenesis through Activation of Peroxisome Proliferator-Activated Receptor γ
David A. Sarruf, Irena Iankova, Anna Abella, Said Assou, Stéphanie Miard & Lluis Fajas
Pages: 9985-9995
Published online: 27 Mar 2023
AbstractforCyclin D3 Promotes Adipogenesis through Activation of Peroxisome Proliferator-Activated Receptor γ | Full Text | References | PDF (959.5 KB)
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Article
A Nuclear Surveillance Pathway for mRNAs with Defective Polyadenylation
Laura Milligan, Claire Torchet, Christine Allmang, Tracey Shipman & David Tollervey
Pages: 9996-10004
Published online: 27 Mar 2023
AbstractforA Nuclear Surveillance Pathway for mRNAs with Defective Polyadenylation | Full Text | References | PDF (559 KB) | Supplemental
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Article
Homologues of the Caenorhabditis elegans Fox-1 Protein Are Neuronal Splicing Regulators in Mammals
Jason G. Underwood, Paul L. Boutz, Joseph D. Dougherty, Peter Stoilov & Douglas L. Black
Pages: 10005-10016
Published online: 27 Mar 2023
AbstractforHomologues of the Caenorhabditis elegans Fox-1 Protein Are Neuronal Splicing Regulators in Mammals | Full Text | References | PDF (984.4 KB) | Supplemental
  • 83 Views
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Article
The Basic Domain of ATH5 Mediates Neuron-Specific Promoter Activity during Retina Development
Dorota Skowronska-Krawczyk, Lidia Matter-Sadzinski, Marc Ballivet & Jean-Marc Matter
Pages: 10029-10039
Published online: 27 Mar 2023
AbstractforThe Basic Domain of ATH5 Mediates Neuron-Specific Promoter Activity during Retina Development | Full Text | References | PDF (618.6 KB)
  • 19 Views
  • 15 CrossRef citations
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Article
Intrinsic Function of the Aryl Hydrocarbon (Dioxin) Receptor as a Key Factor in Female Reproduction
Takashi Baba, Junsei Mimura, Naohito Nakamura, Nobuhiro Harada, Masayuki Yamamoto, Ken-ichirou Morohashi & Yoshiaki Fujii-Kuriyama
Pages: 10040-10051
Published online: 27 Mar 2023
AbstractforIntrinsic Function of the Aryl Hydrocarbon (Dioxin) Receptor as a Key Factor in Female Reproduction | Full Text | References | PDF (996.9 KB)
  • 72 Views
  • 190 CrossRef citations
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Article
Tumor-Derived p53 Mutants Induce NF-κB2 Gene Expression
Mariano J. Scian, Katherine E. R. Stagliano, Michelle A. E. Anderson, Sajida Hassan, Melissa Bowman, Mike F. Miles, Swati Palit Deb & Sumitra Deb
Pages: 10097-10110
Published online: 27 Mar 2023
AbstractforTumor-Derived p53 Mutants Induce NF-κB2 Gene Expression | Full Text | References | PDF (545.9 KB)
  • 67 Views
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Article
Exon Selection in α-Tropomyosin mRNA Is Regulated by the Antagonistic Action of RBM4 and PTB
Jung-Chun Lin & Woan-Yuh Tarn
Pages: 10111-10121
Published online: 27 Mar 2023
AbstractforExon Selection in α-Tropomyosin mRNA Is Regulated by the Antagonistic Action of RBM4 and PTB | Full Text | References | PDF (447.6 KB)
  • 25 Views
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Article
Identification and Characterization of Elf1, a Conserved Transcription Elongation Factor in Saccharomyces cerevisiae
Donald Prather, Nevan J. Krogan, Andrew Emili, Jack F. Greenblatt & Fred Winston
Pages: 10122-10135
Published online: 27 Mar 2023
AbstractforIdentification and Characterization of Elf1, a Conserved Transcription Elongation Factor in Saccharomyces cerevisiae | Full Text | References | PDF (567.8 KB)
  • 76 Views
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Article
Chromatin Immunoprecipitation-Based Screen To Identify Functional Genomic Binding Sites for Sequence-Specific Transactivators
Jamie M. Hearnes, Deborah J. Mays, Kristy L. Schavolt, Luojia Tang, Xin Jiang & Jennifer A. Pietenpol
Pages: 10148-10158
Published online: 27 Mar 2023
AbstractforChromatin Immunoprecipitation-Based Screen To Identify Functional Genomic Binding Sites for Sequence-Specific Transactivators | Full Text | References | PDF (411.4 KB) | Supplemental
  • 21 Views
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Article
Enhanceosome Formation over the Beta Interferon Promoter Underlies a Remote-Control Mechanism Mediated by YY1 and YY2
Martin Klar & Juergen Bode
Pages: 10159-10170
Published online: 27 Mar 2023
AbstractforEnhanceosome Formation over the Beta Interferon Promoter Underlies a Remote-Control Mechanism Mediated by YY1 and YY2 | Full Text | References | PDF (466.2 KB)
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Article
Pendrin Is a Novel In Vivo Downstream Target Gene of the TTF-1/Nkx-2.1 Homeodomain Transcription Factor in Differentiated Thyroid Cells
Monica Dentice, Cristina Luongo, Antonia Elefante, Raffaele Ambrosio, Salvatore Salzano, Mariastella Zannini, Roberto Nitsch, Roberto Di Lauro, Guido Rossi, Gianfranco Fenzi & Domenico Salvatore
Pages: 10171-10182
Published online: 27 Mar 2023
AbstractforPendrin Is a Novel In Vivo Downstream Target Gene of the TTF-1/Nkx-2.1 Homeodomain Transcription Factor in Differentiated Thyroid Cells | Full Text | References | PDF (393.9 KB) | Supplemental
  • 24 Views
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Chromosome Structure and Dynamics

Article
Repair-Independent Chromatin Assembly onto Active Ribosomal Genes in Yeast after UV Irradiation
Antonio Conconi, Michel Paquette, Deirdre Fahy, Vyacheslav A. Bespalov & Michael J. Smerdon
Pages: 9773-9783
Published online: 27 Mar 2023
AbstractforRepair-Independent Chromatin Assembly onto Active Ribosomal Genes in Yeast after UV Irradiation | Full Text | References | PDF (404.2 KB)
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Article
Xeroderma Pigmentosum Complementation Group E Protein (XPE/DDB2): Purification of Various Complexes of XPE and Analyses of Their Damaged DNA Binding and Putative DNA Repair Properties
Gülnihal Kulaksız, Joyce T. Reardon & Aziz Sancar
Pages: 9784-9792
Published online: 27 Mar 2023
AbstractforXeroderma Pigmentosum Complementation Group E Protein (XPE/DDB2): Purification of Various Complexes of XPE and Analyses of Their Damaged DNA Binding and Putative DNA Repair Properties | Full Text | References | PDF (250.6 KB)
  • 32 Views
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Article
The Histone Fold Subunits of Drosophila CHRAC Facilitate Nucleosome Sliding through Dynamic DNA Interactions
Klaus F. Hartlepp, Carlos Fernández-Tornero, Anton Eberharter, Tim Grüne, Christoph W. Müller & Peter B. Becker
Pages: 9886-9896
Published online: 27 Mar 2023
AbstractforThe Histone Fold Subunits of Drosophila CHRAC Facilitate Nucleosome Sliding through Dynamic DNA Interactions | Full Text | References | PDF (642.4 KB) | Supplemental
  • 20 Views
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Article
Insights into the Role of Histone H3 and Histone H4 Core Modifiable Residues in Saccharomyces cerevisiae
Edel M. Hyland, Michael S. Cosgrove, Henrik Molina, Dongxia Wang, Akhilesh Pandey, Robert J. Cottee & Jef D. Boeke
Pages: 10060-10070
Published online: 27 Mar 2023
AbstractforInsights into the Role of Histone H3 and Histone H4 Core Modifiable Residues in Saccharomyces cerevisiae | Full Text | References | PDF (881 KB) | Supplemental
  • 143 Views
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Article
Trf4 and Trf5 Proteins of Saccharomyces cerevisiae Exhibit Poly(A) RNA Polymerase Activity but No DNA Polymerase Activity
Lajos Haracska, Robert E. Johnson, Louise Prakash & Satya Prakash
Pages: 10183-10189
Published online: 27 Mar 2023
AbstractforTrf4 and Trf5 Proteins of Saccharomyces cerevisiae Exhibit Poly(A) RNA Polymerase Activity but No DNA Polymerase Activity | Full Text | References | PDF (230 KB)
  • 26 Views
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Signal Transduction

Article
Mixed-Disulfide Folding Intermediates between Thyroglobulin and Endoplasmic Reticulum Resident Oxidoreductases ERp57 and Protein Disulfide Isomerase
Bruno Di Jeso, Young-nam Park, Luca Ulianich, A. Sonia Treglia, Malene L. Urbanas, Stephen High & Peter Arvan
Pages: 9793-9805
Published online: 27 Mar 2023
AbstractforMixed-Disulfide Folding Intermediates between Thyroglobulin and Endoplasmic Reticulum Resident Oxidoreductases ERp57 and Protein Disulfide Isomerase | Full Text | References | PDF (637.8 KB)
  • 18 Views
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Article
TRAF6 Is Required for TRAF2-Dependent CD40 Signal Transduction in Nonhemopoietic Cells
Clare C. Davies, Tak W. Mak, Lawrence S. Young & Aristides G. Eliopoulos
Pages: 9806-9819
Published online: 27 Mar 2023
AbstractforTRAF6 Is Required for TRAF2-Dependent CD40 Signal Transduction in Nonhemopoietic Cells | Full Text | References | PDF (653.9 KB) | Supplemental
  • 32 Views
  • 51 CrossRef citations
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Article
A Novel Mitogen-Activated Protein Kinase Docking Site in the N Terminus of MEK5α Organizes the Components of the Extracellular Signal-Regulated Kinase 5 Signaling Pathway
Jan Seyfried, Xin Wang, Giorgi Kharebava & Cathy Tournier
Pages: 9820-9828
Published online: 27 Mar 2023
AbstractforA Novel Mitogen-Activated Protein Kinase Docking Site in the N Terminus of MEK5α Organizes the Components of the Extracellular Signal-Regulated Kinase 5 Signaling Pathway | Full Text | References | PDF (477.6 KB)
  • 17 Views
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Article
Kinetic Analysis of Smad Nucleocytoplasmic Shuttling Reveals a Mechanism for Transforming Growth Factor β-Dependent Nuclear Accumulation of Smads
Bernhard Schmierer & Caroline S. Hill
Pages: 9845-9858
Published online: 27 Mar 2023
AbstractforKinetic Analysis of Smad Nucleocytoplasmic Shuttling Reveals a Mechanism for Transforming Growth Factor β-Dependent Nuclear Accumulation of Smads | Full Text | References | PDF (1,003.5 KB) | Supplemental
  • 72 Views
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Article
Human c-Myc Isoforms Differentially Regulate Cell Growth and Apoptosis in Drosophila melanogaster
C. Benassayag, L. Montero, N. Colombié, P. Gallant, D. Cribbs & D. Morello
Pages: 9897-9909
Published online: 27 Mar 2023
AbstractforHuman c-Myc Isoforms Differentially Regulate Cell Growth and Apoptosis in Drosophila melanogaster | Full Text | References | PDF (1 MB)
  • 101 Views
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Article
CRMP-2 Is Involved in Kinesin-1-Dependent Transport of the Sra-1/WAVE1 Complex and Axon Formation
Yoji Kawano, Takeshi Yoshimura, Daisuke Tsuboi, Saeko Kawabata, Takako Kaneko-Kawano, Hiromichi Shirataki, Tadaomi Takenawa & Kozo Kaibuchi
Pages: 9920-9935
Published online: 27 Mar 2023
AbstractforCRMP-2 Is Involved in Kinesin-1-Dependent Transport of the Sra-1/WAVE1 Complex and Axon Formation | Full Text | References | PDF (1.6 MB) | Supplemental
  • 84 Views
  • 199 CrossRef citations
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Article
Regulation of Apoptotic c-Jun N-Terminal Kinase Signaling by a Stabilization-Based Feed-Forward Loop
Zhiheng Xu, Nikolay V. Kukekov & Lloyd A. Greene
Pages: 9949-9959
Published online: 27 Mar 2023
AbstractforRegulation of Apoptotic c-Jun N-Terminal Kinase Signaling by a Stabilization-Based Feed-Forward Loop | Full Text | References | PDF (790.7 KB) | Supplemental
  • 12 Views
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Article
Phosphorylation by Rho Kinase Regulates CRMP-2 Activity in Growth Cones
Nariko Arimura, Céline Ménager, Yoji Kawano, Takeshi Yoshimura, Saeko Kawabata, Atsushi Hattori, Yuko Fukata, Mutsuki Amano, Yoshio Goshima, Masaki Inagaki, Nobuhiro Morone, Jiro Usukura & Kozo Kaibuchi
Pages: 9973-9984
Published online: 27 Mar 2023
AbstractforPhosphorylation by Rho Kinase Regulates CRMP-2 Activity in Growth Cones | Full Text | References | PDF (908.7 KB)
  • 73 Views
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Article
Transforming Growth Factor β-Dependent Sequential Activation of Smad, Bim, and Caspase-9 Mediates Physiological Apoptosis in Gastric Epithelial Cells
Masatoshi Ohgushi, Shunsuke Kuroki, Hiroshi Fukamachi, Lorraine A. O'Reilly, Keisuke Kuida, Andreas Strasser & Shin Yonehara
Pages: 10017-10028
Published online: 27 Mar 2023
AbstractforTransforming Growth Factor β-Dependent Sequential Activation of Smad, Bim, and Caspase-9 Mediates Physiological Apoptosis in Gastric Epithelial Cells | Full Text | References | PDF (682 KB) | Supplemental
  • 28 Views
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Article
Snm1-Deficient Mice Exhibit Accelerated Tumorigenesis and Susceptibility to Infection
Shamima Ahkter, Christopher T. Richie, Nianxiang Zhang, Richard R. Behringer, Chengming Zhu & Randy J. Legerski
Pages: 10071-10078
Published online: 27 Mar 2023
AbstractforSnm1-Deficient Mice Exhibit Accelerated Tumorigenesis and Susceptibility to Infection | Full Text | References | PDF (371.2 KB) | Supplemental
  • 20 Views
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Article
RelB/p52 NF-κB Complexes Rescue an Early Delay in Mammary Gland Development in Transgenic Mice with Targeted Superrepressor IκB-α Expression and Promote Carcinogenesis of the Mammary Gland
Elizabeth G. Demicco, Kathryn T. Kavanagh, Raphaëlle Romieu-Mourez, Xiaobo Wang, Sangmin R. Shin, Esther Landesman-Bollag, David C. Seldin & Gail E. Sonenshein
Pages: 10136-10147
Published online: 27 Mar 2023
AbstractforRelB/p52 NF-κB Complexes Rescue an Early Delay in Mammary Gland Development in Transgenic Mice with Targeted Superrepressor IκB-α Expression and Promote Carcinogenesis of the Mammary Gland | Full Text | References | PDF (465.4 KB)
  • 21 Views
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Mammalian Genetic Models With Minimal Or Complex Phenotypes

Article
Loss of the Putative Tumor Suppressor Band 4.1B/Dal1 Gene Is Dispensable for Normal Development and Does Not Predispose to Cancer
Chunling Yi, Joseph H. McCarty, Scott A. Troutman, Matthew S. Eckman, Roderick T. Bronson & Joseph L. Kissil
Pages: 10052-10059
Published online: 27 Mar 2023
AbstractforLoss of the Putative Tumor Suppressor Band 4.1B/Dal1 Gene Is Dispensable for Normal Development and Does Not Predispose to Cancer | Full Text | References | PDF (577.6 KB)
  • 19 Views
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Article
53BP1 Cooperates with p53 and Functions as a Haploinsufficient Tumor Suppressor in Mice
Irene M. Ward, Simone Difilippantonio, Kay Minn, Melissa D. Mueller, Julian R. Molina, Xiaochun Yu, Craig S. Frisk, Thomas Ried, Andre Nussenzweig & Junjie Chen
Pages: 10079-10086
Published online: 27 Mar 2023
Abstractfor53BP1 Cooperates with p53 and Functions as a Haploinsufficient Tumor Suppressor in Mice | Full Text | References | PDF (408.8 KB)
  • 35 Views
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Article
Mitochondrial Lipid Abnormality and Electron Transport Chain Impairment in Mice Lacking α-Synuclein
Christopher E. Ellis, Eric J. Murphy, Drake C. Mitchell, Mikhail Y. Golovko, Fernando Scaglia, Gwendolyn C. Barceló-Coblijn & Robert L. Nussbaum
Pages: 10190-10201
Published online: 27 Mar 2023
AbstractforMitochondrial Lipid Abnormality and Electron Transport Chain Impairment in Mice Lacking α-Synuclein | Full Text | References | PDF (220.7 KB) | Supplemental
  • 137 Views
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Intracellular Trafficking

Article
Caveolin-1 Is Not Essential for Biosynthetic Apical Membrane Transport
Aki Manninen, Paul Verkade, Soazig Le Lay, Juha Torkko, Michael Kasper, Joachim Füllekrug & Kai Simons
Pages: 10087-10096
Published online: 27 Mar 2023
AbstractforCaveolin-1 Is Not Essential for Biosynthetic Apical Membrane Transport | Full Text | References | PDF (796.1 KB)
  • 27 Views
  • 38 CrossRef citations
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Errata

Correction
GATA Motifs Regulate Early Hematopoietic Lineage-Specific Expression of the Gata2 Gene
Page: 10202
Published online: 27 Mar 2023
CitationforGATA Motifs Regulate Early Hematopoietic Lineage-Specific Expression of the Gata2 Gene | Full Text | PDF (28.7 KB)
  • 80 Views
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Free Access
Correction
A Novel Rat Homolog of the Saccharomyces cerevisiae Ubiquitin-Conjugating Enzymes UBC4 and UBC5 with Distinct Biochemical Features Is Induced during Spermatogenesis
Page: 10203
Published online: 27 Mar 2023
CitationforA Novel Rat Homolog of the Saccharomyces cerevisiae Ubiquitin-Conjugating Enzymes UBC4 and UBC5 with Distinct Biochemical Features Is Induced during Spermatogenesis | Full Text | PDF (26.7 KB)
  • 95 Views
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Free Access
Correction
Orphan Nuclear Receptor GCNF Is Required for the Repression ofPluripotency Genes during Retinoic Acid-Induced EmbryonicStem Cell Differentiation
Page: 10204
Published online: 27 Mar 2023
CitationforOrphan Nuclear Receptor GCNF Is Required for the Repression ofPluripotency Genes during Retinoic Acid-Induced EmbryonicStem Cell Differentiation | Full Text | PDF (25.9 KB)
  • 89 Views
  • 1 CrossRef citations
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Free Access

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