Gut Microbes, Volume 15, Issue 2 (2023)

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Gut Microbes, Volume 15, Issue 2 (2023)

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Review

Review Article
Unveiling the complex relationship between gut microbiota and liver cancer: opportunities for novel therapeutic interventions
Jayashi Rajapakse, Saroj Khatiwada, Anna Camille Akon, Kin Lam Yu, Sj Shen & Amany Zekry
Article: 2240031
Published online: 24 Aug 2023
AbstractforUnveiling the complex relationship between gut microbiota and liver cancer: opportunities for novel therapeutic interventions | Full Text | References | PDF (2.1 MB) | EPUB
  • 3563 Views
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Open Access
Review Article
Statistical normalization methods in microbiome data with application to microbiome cancer research
Yinglin Xia
Article: 2244139
Published online: 25 Aug 2023
AbstractforStatistical normalization methods in microbiome data with application to microbiome cancer research | Full Text | References | PDF (892.6 KB) | EPUB
  • 3493 Views
  • 7 CrossRef citations
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Open Access

Research Paper

Article
Bifidobacterium infantis utilizes N-acetylglucosamine-containing human milk oligosaccharides as a nitrogen source
Shuqi Li, Xiaomeng You, Asha Rani, Ezgi Özcan & David A. Sela
Article: 2244721
Published online: 23 Aug 2023
AbstractforBifidobacterium infantis utilizes N-acetylglucosamine-containing human milk oligosaccharides as a nitrogen source | Full Text | References | PDF (1.8 MB) | EPUB | Supplemental
  • 1882 Views
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Open Access
Article
Multimodal metagenomic analysis reveals microbial single nucleotide variants as superior biomarkers for early detection of colorectal cancer
Wenxing Gao, Xiang Gao, Lixin Zhu, Sheng Gao, Ruicong Sun, Zhongsheng Feng, Dingfeng Wu, Zhanju Liu, Ruixin Zhu & Na Jiao
Article: 2245562
Published online: 27 Aug 2023
AbstractforMultimodal metagenomic analysis reveals microbial single nucleotide variants as superior biomarkers for early detection of colorectal cancer | Full Text | References | PDF (5.1 MB) | EPUB | Supplemental
  • 2903 Views
  • 3 CrossRef citations
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Open Access
Article
Multi-omics analysis revealing the interplay between gut microbiome and the host following opioid use
Udhghatri Kolli, Richa Jalodia, Shamsudheen Moidunny, Praveen Kumar Singh, Yuguang Ban, Junyi Tao, Gonzalo Nathaniel Cantu, Eridania Valdes, Sundaram Ramakrishnan & Sabita Roy
Article: 2246184
Published online: 23 Aug 2023
AbstractforMulti-omics analysis revealing the interplay between gut microbiome and the host following opioid use | Full Text | References | PDF (5.6 MB) | EPUB | Supplemental
  • 3244 Views
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Open Access
Article
Carbohydrate quality, fecal microbiota and cardiometabolic health in older adults: a cohort study
Alessandro Atzeni, Stephanie K. Nishi, Nancy Babio, Clara Belzer, Prokopis Konstanti, Jesús Vioque, Dolores Corella, Olga Castañer, Josep Vidal, Isabel Moreno-Indias, Laura Torres-Collado, Eva M. Asensio, Montserrat Fitó, Ana Maria Gomez-Perez, Alejandro Arias, Miguel Ruiz-Canela, Frank B. Hu, Francisco J. Tinahones & Jordi Salas-Salvadó
Article: 2246185
Published online: 23 Aug 2023
AbstractforCarbohydrate quality, fecal microbiota and cardiometabolic health in older adults: a cohort study | Full Text | References | PDF (1.2 MB) | EPUB | Supplemental
  • 2624 Views
  • 2 CrossRef citations
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Open Access
Article
Obesity is the main driver of altered gut microbiome functions in the metabolically unhealthy
Jacobo de la Cuesta-Zuluaga, Kelsey E. Huus, Nicholas D. Youngblut, Juan S. Escobar & Ruth E. Ley
Article: 2246634
Published online: 07 Sep 2023
AbstractforObesity is the main driver of altered gut microbiome functions in the metabolically unhealthy | Full Text | References | PDF (5 MB) | EPUB | Supplemental
  • 2325 Views
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Open Access

Review

Review Article
The microbiome landscape in pediatric Crohn’s disease and therapeutic implications
Karin Fetter, Markus Weigel, Benjamin Ott, Moritz Fritzenwanker, Sebastian Stricker, Jan de Laffolie & Torsten Hain
Article: 2247019
Published online: 23 Aug 2023
AbstractforThe microbiome landscape in pediatric Crohn’s disease and therapeutic implications | Full Text | References | PDF (3.9 MB) | EPUB
  • 1975 Views
  • 3 CrossRef citations
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Open Access

Research Paper

Article
Effect of synbiotic supplementation on immune parameters and gut microbiota in healthy adults: a double-blind randomized controlled trial
Xiaoqin Li, Shan Hu, Jiawei Yin, Xiaobo Peng, Lei King, Linyan Li, Zihui Xu, Li Zhou, Zhao Peng, Xiaolei Ze, Xuguang Zhang, Qiangchuan Hou, Zhilei Shan & Liegang Liu
Article: 2247025
Published online: 23 Aug 2023
AbstractforEffect of synbiotic supplementation on immune parameters and gut microbiota in healthy adults: a double-blind randomized controlled trial | Full Text | References | PDF (2.7 MB) | EPUB | Supplemental
  • 3081 Views
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Open Access
Article
Targeting the gut microbiota with dietary fibers: a novel approach to prevent the development cardiovascular complications linked to systemic lupus erythematosus in a preclinical study
Javier Moleón, Cristina González-Correa, Iñaki Robles-Vera, Sofía Miñano, Néstor de la Visitación, Antonio Manuel Barranco, Natividad Martín-Morales, Francisco O’Valle, Laura Mayo-Martínez, Antonia García, Marta Toral, Rosario Jiménez, Miguel Romero & Juan Duarte
Article: 2247053
Published online: 24 Aug 2023
AbstractforTargeting the gut microbiota with dietary fibers: a novel approach to prevent the development cardiovascular complications linked to systemic lupus erythematosus in a preclinical study | Full Text | References | PDF (4.3 MB) | EPUB | Supplemental
  • 2491 Views
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Open Access
Article
A foundational approach to culture and analyze malnourished organoids
Meryl Perlman, Stefania Senger, Smriti Verma, James Carey & Christina S. Faherty
Article: 2248713
Published online: 19 Sep 2023
AbstractforA foundational approach to culture and analyze malnourished organoids | Full Text | References | PDF (3.9 MB) | EPUB
  • 1625 Views
  • 2 CrossRef citations
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Open Access
Article
Microbial metabolite butyrate promotes anti-PD-1 antitumor efficacy by modulating T cell receptor signaling of cytotoxic CD8 T cell
Xinhai Zhu, Ke Li, Guichao Liu, Ruan Wu, Yan Zhang, Siying Wang, Meng Xu, Ligong Lu & Peng Li
Article: 2249143
Published online: 27 Aug 2023
AbstractforMicrobial metabolite butyrate promotes anti-PD-1 antitumor efficacy by modulating T cell receptor signaling of cytotoxic CD8 T cell | Full Text | References | PDF (10.5 MB) | EPUB | Supplemental
  • 4399 Views
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Open Access
Article
Gut microbiota from patients with COVID-19 cause alterations in mice that resemble post-COVID symptoms
Viviani Mendes de Almeida, Daiane F. Engel, Mayra F. Ricci, Clênio Silva Cruz, Ícaro Santos Lopes, Daniele Almeida Alves, Mirna d’ Auriol, João Magalhães, Elayne C. Machado, Victor M. Rocha, Toniana G. Carvalho, Larisse S. B. Lacerda, Jordane C. Pimenta, Mariana Aganetti, Giuliana S. Zuccoli, Bradley J. Smith, Victor C. Carregari, Erika da Silva Rosa, Izabela Galvão, Geovanni Dantas Cassali, Cristiana C. Garcia, Mauro Martins Teixeira, Leiliane C. André, Fabiola Mara Ribeiro, Flaviano S. Martins, Rafael Simone Saia, Vivian Vasconcelos Costa, Daniel Martins-de-Souza, Philip M. Hansbro, João Trindade Marques, Eric R. G. R. Aguiar & Angélica T. Vieira
Article: 2249146
Published online: 05 Sep 2023
AbstractforGut microbiota from patients with COVID-19 cause alterations in mice that resemble post-COVID symptoms | Full Text | References | PDF (8 MB) | EPUB | Supplemental
  • 3201 Views
  • 10 CrossRef citations
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Open Access
Article
Linking serum vitamin D levels with gut microbiota after 1-year lifestyle intervention with Mediterranean diet in patients with obesity and metabolic syndrome: a nested cross-sectional and prospective study
Hatim Boughanem, Patricia Ruiz-Limón, Jesús Pilo, José Manuel Lisbona-Montañez, Francisco J. Tinahones, Isabel Moreno Indias & Manuel Macías-González
Article: 2249150
Published online: 30 Aug 2023
AbstractforLinking serum vitamin D levels with gut microbiota after 1-year lifestyle intervention with Mediterranean diet in patients with obesity and metabolic syndrome: a nested cross-sectional and prospective study | Full Text | References | PDF (1.1 MB) | EPUB | Supplemental
  • 1891 Views
  • 1 CrossRef citations
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Open Access

Review

Review Article
The curious case of Prevotella copri
Nehal Adel Abdelsalam, Shaimaa M. Hegazy & Ramy K. Aziz
Article: 2249152
Published online: 01 Sep 2023
AbstractforThe curious case of Prevotella copri | Full Text | References | PDF (788.3 KB) | EPUB
  • 8877 Views
  • 4 CrossRef citations
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Open Access

Research Paper

Article
Activation of Nod2 signaling upon norovirus infection enhances antiviral immunity and susceptibility to colitis
Ghaffar Muharram, Marion Thépaut, Pierre-Emmanuel Lobert, Teddy Grandjean, Olivier Boulard, Myriam Delacre, Emmrich Wakeford, Richard Wheeler, Lionel Franz Poulin, Ivo Gomperts Boneca, Frank Lafont, Marie-Cécile Michallet, Didier Hober, Ken Cadwell & Mathias Chamaillard
Article: 2249960
Published online: 01 Sep 2023
AbstractforActivation of Nod2 signaling upon norovirus infection enhances antiviral immunity and susceptibility to colitis | Full Text | References | PDF (3.4 MB) | EPUB | Supplemental
  • 1772 Views
  • 1 CrossRef citations
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Open Access
Article
Gut microbiome diversity, variability, and latent community types compared with shifts in body weight during the freshman year of college in dormitory-housed adolescents
Alex E. Mohr, Mary M. Ahern, Dorothy D. Sears, Meg Bruening & Corrie M. Whisner
Article: 2250482
Published online: 29 Aug 2023
AbstractforGut microbiome diversity, variability, and latent community types compared with shifts in body weight during the freshman year of college in dormitory-housed adolescents | Full Text | References | PDF (3.9 MB) | EPUB | Supplemental
  • 1976 Views
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Open Access
Article
Ring1a protects against colitis through regulating mucosal immune system and colonic microbial ecology
Yashu Wang, Qianru Li, Jiayu Zhang, Pingping Liu, Huaixin Zheng, Lijuan Chen, Zhen Wang, Chen Tan, Min Zhang, Hongxia Zhang, Wenqing Miao, Yuke Wang, Xiaoyan Xuan, Guoqiang Yi & Peng Wang
Article: 2251646
Published online: 01 Sep 2023
AbstractforRing1a protects against colitis through regulating mucosal immune system and colonic microbial ecology | Full Text | References | PDF (5.2 MB) | EPUB | Supplemental
  • 1981 Views
  • 4 CrossRef citations
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Open Access

Research paper

Article
Lactobacillus johnsonii N6.2 phospholipids induce immature-like dendritic cells with a migratory-regulatory-like transcriptional signature
Alexandra E. Cuaycal, Leandro Dias Teixeira, Graciela L. Lorca & Claudio F. Gonzalez
Article: 2252447
Published online: 07 Sep 2023
AbstractforLactobacillus johnsonii N6.2 phospholipids induce immature-like dendritic cells with a migratory-regulatory-like transcriptional signature | Full Text | References | PDF (3.5 MB) | EPUB | Supplemental
  • 1827 Views
  • 2 CrossRef citations
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Open Access

Research Paper

Article
Akkermansia muciniphila supplementation prevents cognitive impairment in sleep-deprived mice by modulating microglial engulfment of synapses
Na Li, Shuwen Tan, Yue Wang, Jiao Deng, Nan Wang, Shan Zhu, Wen Tian, Jing Xu & Qiang Wang
Article: 2252764
Published online: 06 Sep 2023
AbstractforAkkermansia muciniphila supplementation prevents cognitive impairment in sleep-deprived mice by modulating microglial engulfment of synapses | Full Text | References | PDF (11.4 MB) | EPUB | Supplemental
  • 4852 Views
  • 6 CrossRef citations
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Open Access

Review

Review Article
Targeting microbial quorum sensing: the next frontier to hinder bacterial driven gastrointestinal infections
Ying Su & Tao Ding
Article: 2252780
Published online: 07 Sep 2023
AbstractforTargeting microbial quorum sensing: the next frontier to hinder bacterial driven gastrointestinal infections | Full Text | References | PDF (3 MB) | EPUB
  • 2155 Views
  • 2 CrossRef citations
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Open Access

Research Paper

Article
Host miR-129-5p reverses effects of ginsenoside Rg1 on morphine reward possibly mediated by changes in B. vulgatus and serotonin metabolism in hippocampus
Chan Li, Yingbo Lin, Rukun Lin, Zhijie Chen, Qichun Zhou, Chaohua Luo & Zhixian Mo
Article: 2254946
Published online: 12 Sep 2023
AbstractforHost miR-129-5p reverses effects of ginsenoside Rg1 on morphine reward possibly mediated by changes in B. vulgatus and serotonin metabolism in hippocampus | Full Text | References | PDF (3.1 MB) | EPUB | Supplemental
  • 1398 Views
  • 1 CrossRef citations
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Open Access

Brief Report

Brief Report
Distinctive patterns of sulfide- and butyrate-metabolizing bacteria after bariatric surgery: potential implications for colorectal cancer risk
Hisham Hussan, Steven K. Clinton, Elizabeth M. Grainger, Maxine Webb, Cankun Wang, Amy Webb, Bradley Needleman, Sabrena Noria, Jiangjiang Zhu, Fouad Choueiry, Maciej Pietrzak & Michael T. Bailey
Article: 2255345
Published online: 13 Sep 2023
AbstractforDistinctive patterns of sulfide- and butyrate-metabolizing bacteria after bariatric surgery: potential implications for colorectal cancer risk | Full Text | References | PDF (2.5 MB) | EPUB | Supplemental
  • 1794 Views
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Open Access

Research Paper

Article
Microbial stimulation of oxytocin release from the intestinal epithelium via secretin signaling
Heather A. Danhof, Jihwan Lee, Aanchal Thapa, Robert A. Britton & Sara C. Di Rienzi
Article: 2256043
Published online: 12 Sep 2023
AbstractforMicrobial stimulation of oxytocin release from the intestinal epithelium via secretin signaling | Full Text | References | PDF (4 MB) | EPUB | Supplemental
  • 5668 Views
  • 3 CrossRef citations
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Open Access
Article
Disruption of the microbiota-gut-brain axis is a defining characteristic of the α-Gal A (-/0) mouse model of Fabry disease
C. Delprete, R. Rimondini Giorgini, E. Lucarini, T.F.S. Bastiaanssen, D. Scicchitano, N. Interino, F. Formaggio, F. Uhlig, C. Ghelardini, N.P. Hyland, J.F. Cryan, R. Liguori, M. Candela, J. Fiori, S. Turroni, L. Di Cesare Mannelli & M. Caprini
Article: 2256045
Published online: 15 Sep 2023
AbstractforDisruption of the microbiota-gut-brain axis is a defining characteristic of the α-Gal A (-/0) mouse model of Fabry disease | Full Text | References | PDF (9.3 MB) | EPUB | Supplemental
  • 2075 Views
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Open Access
Article
Exploring the inhibitory potential of the antiarrhythmic drug amiodarone against Clostridioides difficile toxins TcdA and TcdB
Judith Schumacher, Astrid Nienhaus, Sebastian Heber, Jauheni Matylitsky, Esteban Chaves-Olarte, César Rodríguez, Holger Barth & Panagiotis Papatheodorou
Article: 2256695
Published online: 25 Sep 2023
AbstractforExploring the inhibitory potential of the antiarrhythmic drug amiodarone against Clostridioides difficile toxins TcdA and TcdB | Full Text | References | PDF (9.4 MB) | EPUB | Supplemental
  • 2182 Views
  • 2 CrossRef citations
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Open Access
Article
Alterations of milk oligosaccharides in mothers with gestational diabetes mellitus impede colonization of beneficial bacteria and development of RORγt+ Treg cell-mediated immune tolerance in neonates
Xinke Li, Xixi Ning, Binqi Rui, Yushuang Wang, Zengjie Lei, Da Yu, Feitong Liu, Yanjie Deng, Jieli Yuan, Wenzhe Li, Jingyu Yan & Ming Li
Article: 2256749
Published online: 23 Sep 2023
AbstractforAlterations of milk oligosaccharides in mothers with gestational diabetes mellitus impede colonization of beneficial bacteria and development of RORγt+ Treg cell-mediated immune tolerance in neonates | Full Text | References | PDF (10.6 MB) | EPUB
  • 2729 Views
  • 4 CrossRef citations
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Open Access
Article
Shigella flexneri utilizes intestinal signals to control its virulence
Rimi Chowdhury, Paulina D. Pavinski Bitar, Katherine E. Bell & Craig Altier
Article: 2256767
Published online: 23 Sep 2023
AbstractforShigella flexneri utilizes intestinal signals to control its virulence | Full Text | References | PDF (2.3 MB) | EPUB
  • 736 Views
  • 3 CrossRef citations
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Open Access
Article
Intestinal epithelial pH-sensing receptor GPR65 maintains mucosal homeostasis via regulating antimicrobial defense and restrains gut inflammation in inflammatory bowel disease
Gengfeng Li, Jian Lin, Xiang Gao, Huiling Su, Ritian Lin, Han Gao, Zhongsheng Feng, Huili Wu, Baisui Feng, Keqiang Zuo, Yingchuan Li, Wei Wu, Leilei Fang & Zhanju Liu
Article: 2257269
Published online: 25 Sep 2023
AbstractforIntestinal epithelial pH-sensing receptor GPR65 maintains mucosal homeostasis via regulating antimicrobial defense and restrains gut inflammation in inflammatory bowel disease | Full Text | References | PDF (10 MB) | EPUB | Supplemental
  • 2688 Views
  • 2 CrossRef citations
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Open Access
Article
Impact of milk secretor status on the fecal metabolome and microbiota of breastfed infants
Aidong Wang, Aly Diana, Sofa Rahmannia, Rosalind S Gibson, Lisa A Houghton & Carolyn M Slupsky
Article: 2257273
Published online: 23 Sep 2023
AbstractforImpact of milk secretor status on the fecal metabolome and microbiota of breastfed infants | Full Text | References | PDF (2.3 MB) | EPUB | Supplemental
  • 1461 Views
  • 1 CrossRef citations
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Open Access
Article
Gut virome profiling identifies an association between temperate phages and colorectal cancer promoted by Helicobacter pylori infection
Shiqi Luo, Jinlong Ru, Mohammadali Khan Mirzaei, Jinling Xue, Xue Peng, Anna Ralser, Raquel Mejías-Luque, Markus Gerhard & Li Deng
Article: 2257291
Published online: 25 Sep 2023
AbstractforGut virome profiling identifies an association between temperate phages and colorectal cancer promoted by Helicobacter pylori infection | Full Text | References | PDF (1.5 MB) | EPUB | Supplemental
  • 2244 Views
  • 1 CrossRef citations
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Open Access
Article
The edible plant microbiome: evidence for the occurrence of fruit and vegetable bacteria in the human gut
Wisnu Adi Wicaksono, Tomislav Cernava, Birgit Wassermann, Ahmed Abdelfattah, Maria J. Soto-Giron, Gerardo V. Toledo, Suvi M. Virtanen, Mikael Knip, Heikki Hyöty & Gabriele Berg
Article: 2258565
Published online: 23 Sep 2023
AbstractforThe edible plant microbiome: evidence for the occurrence of fruit and vegetable bacteria in the human gut | Full Text | References | PDF (2.6 MB) | EPUB | Supplemental
  • 11203 Views
  • 6 CrossRef citations
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Open Access
Article
Human gut microbiome and metabolite dynamics under simulated microgravity
Ana Ramos-Nascimento, Lucia Grenga, Sven-Bastiaan Haange, Alexandra Himmelmann, Franca Sabine Arndt, Yen-Tran Ly, Guylaine Miotello, Olivier Pible, Nico Jehmlich, Beatrice Engelmann, Martin von Bergen, Edwin Mulder, Petra Frings-Meuthen, Christine Elisabeth Hellweg, Jens Jordan, Ulrike Rolle-Kampczyk, Jean Armengaud & Ralf Moeller
Article: 2259033
Published online: 25 Sep 2023
AbstractforHuman gut microbiome and metabolite dynamics under simulated microgravity | Full Text | References | PDF (3.5 MB) | EPUB | Supplemental
  • 1637 Views
  • 2 CrossRef citations
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Open Access
Article
Parity modulates impact of BMI and gestational weight gain on gut microbiota in human pregnancy
Katherine M. Kennedy, Andreas Plagemann, Julia Sommer, Marie Hofmann, Wolfgang Henrich, Jon F.R. Barrett, Michael G. Surette, Stephanie Atkinson, Thorsten Braun & Deborah M. Sloboda
Article: 2259316
Published online: 09 Oct 2023
AbstractforParity modulates impact of BMI and gestational weight gain on gut microbiota in human pregnancy | Full Text | References | PDF (7.4 MB) | EPUB | Supplemental
  • 1138 Views
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Open Access

Correction

Correction
Correction
Article: 2260604
Published online: 26 Oct 2023
First Page PreviewforCorrection | Full Text | PDF (2.5 MB) | EPUB
  • 164 Views
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Open Access

Brief Report

Brief Report
In vitro interactions between Blautia hydrogenotrophica, Desulfovibrio piger and Methanobrevibacter smithii under hydrogenotrophic conditions
Taojun Wang, Nils Leibrock, Caroline M. Plugge, Hauke Smidt & Erwin G. Zoetendal
Article: 2261784
Published online: 27 Sep 2023
AbstractforIn vitro interactions between Blautia hydrogenotrophica, Desulfovibrio piger and Methanobrevibacter smithii under hydrogenotrophic conditions | Full Text | References | PDF (2.1 MB) | EPUB | Supplemental
  • 1198 Views
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Open Access

Research Paper

Article
Diet and gut microbial associations in irritable bowel syndrome according to disease subtype
Yiqing Wang, Wenjie Ma, Raaj Mehta, Long H. Nguyen, Mingyang Song, David A. Drew, Francesco Asnicar, Curtis Huttenhower, Nicola Segata, Jonathan Wolf, Tim Spector, Sarah Berry, Kyle Staller & Andrew T. Chan
Article: 2262130
Published online: 02 Oct 2023
AbstractforDiet and gut microbial associations in irritable bowel syndrome according to disease subtype | Full Text | References | PDF (2.5 MB) | EPUB | Supplemental
  • 3279 Views
  • 2 CrossRef citations
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Open Access
Article
Campylobacter jejuni benefits from the bile salt deoxycholate under low-oxygen condition in a PldA dependent manner
Xuefeng Cao, Jos P.M. van Putten & Marc M.S.M. Wösten
Article: 2262592
Published online: 28 Sep 2023
AbstractforCampylobacter jejuni benefits from the bile salt deoxycholate under low-oxygen condition in a PldA dependent manner | Full Text | References | PDF (3.7 MB) | EPUB | Supplemental
  • 857 Views
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Open Access

Letter to the Editor

Letter to the Editor
Letter regarding “Effect of synbiotic supplementation on immune parameters and gut microbiota in healthy adults: a double-blind randomized controlled trial”
Yongjian Lin
Article: 2262618
Published online: 27 Sep 2023
CitationforLetter regarding “Effect of synbiotic supplementation on immune parameters and gut microbiota in healthy adults: a double-blind randomized controlled trial” | Full Text | References | PDF (183.9 KB) | EPUB
  • 538 Views
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Open Access

Review

Review Article
Progress of linking gut microbiota and musculoskeletal health: casualty, mechanisms, and translational values
Yu Wang, Yusheng Li, Lin Bo, Enyuan Zhou, Yanyan Chen, Shinen Naranmandakh, Wenqing Xie, Qin Ru, Lin Chen, Zhaohua Zhu, Changhai Ding & Yuxiang Wu
Article: 2263207
Published online: 06 Oct 2023
AbstractforProgress of linking gut microbiota and musculoskeletal health: casualty, mechanisms, and translational values | Full Text | References | PDF (2.9 MB) | EPUB
  • 2259 Views
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Open Access
Review Article
Low-level inflammation, immunity, and brain-gut axis in IBS: unraveling the complex relationships
Yi Yuan, Xiyang Wang, Shun Huang, Hao Wang & Guoming Shen
Article: 2263209
Published online: 02 Oct 2023
AbstractforLow-level inflammation, immunity, and brain-gut axis in IBS: unraveling the complex relationships | Full Text | References | PDF (1 MB) | EPUB
  • 2495 Views
  • 4 CrossRef citations
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Open Access
Review Article
The influence of microbiota on ferroptosis in intestinal diseases
Ting Yao & Lanjuan Li
Article: 2263210
Published online: 05 Oct 2023
AbstractforThe influence of microbiota on ferroptosis in intestinal diseases | Full Text | References | PDF (4.6 MB) | EPUB
  • 2380 Views
  • 12 CrossRef citations
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Open Access

Research Paper

Article
Colorectal cancer–associated T cell receptor repertoire abnormalities are linked to gut microbiome shifts and somatic cell mutations
Yuan Cao, Jifeng Wang, Weiliang Hou, Yanqiang Ding, Yefei Zhu, Jiayi Zheng, Qiongyi Huang, Zhan Cao, Ruting Xie, Qing Wei & Huanlong Qin
Article: 2263934
Published online: 05 Oct 2023
AbstractforColorectal cancer–associated T cell receptor repertoire abnormalities are linked to gut microbiome shifts and somatic cell mutations | Full Text | References | PDF (5.2 MB) | EPUB | Supplemental
  • 1793 Views
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Open Access

Review

Review Article
Impact of glyphosate (RoundupTM) on the composition and functionality of the gut microbiome
Lauren Walsh, Colin Hill & R. Paul Ross
Article: 2263935
Published online: 06 Oct 2023
AbstractforImpact of glyphosate (RoundupTM) on the composition and functionality of the gut microbiome | Full Text | References | PDF (2 MB) | EPUB
  • 2028 Views
  • 3 CrossRef citations
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Open Access

Brief Report

Brief Report
Targeting hypoxia-inducible factor-1 alpha suppresses Helicobacter pylori-induced gastric injury via attenuation of both cag-mediated microbial virulence and proinflammatory host responses
Jennifer M. Noto, M. Blanca Piazuelo, Judith Romero-Gallo, Alberto G. Delgado, Giovanni Suarez, Konstantina Akritidou, Miguel Girod Hoffman, Juan Carlos Roa, Cormac T. Taylor & Richard M. Peek , Jr
Article: 2263936
Published online: 13 Oct 2023
AbstractforTargeting hypoxia-inducible factor-1 alpha suppresses Helicobacter pylori-induced gastric injury via attenuation of both cag-mediated microbial virulence and proinflammatory host responses | Full Text | References | PDF (3.7 MB) | EPUB | Supplemental
  • 1393 Views
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Open Access

Research Paper

Article
Identification of a functional peptide of a probiotic bacterium-derived protein for the sustained effect on preventing colitis
Harpreet Kaur, Syed Azmal Ali, Sarah P. Short, Christopher S. Williams, Jeremy A. Goettel, M. Kay Washington, Richard M. Peek Jr, Sari A. Acra & Fang Yan
Article: 2264456
Published online: 10 Oct 2023
AbstractforIdentification of a functional peptide of a probiotic bacterium-derived protein for the sustained effect on preventing colitis | Full Text | References | PDF (7.2 MB) | EPUB | Supplemental
  • 1842 Views
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Open Access
Article
Successful weight regain attenuation by autologous fecal microbiota transplantation is associated with non-core gut microbiota changes during weight loss; randomized controlled trial
Omer Kamer, Ehud Rinott, Gal Tsaban, Alon Kaplan, Anat Yaskolka Meir, Hila Zelicha, Dan Knights, Kieran Tuohy, Francesca Fava, Matthias Uwe Scholz, Oren Ziv, Elad Rubin, Matthias Blüher, Michael Stumvoll, Uta Ceglarek, Karine Clément, Omry Koren, Frank B. Hu, Meir J. Stampfer, Dong D. Wang, Ilan Youngster & Iris Shai
Article: 2264457
Published online: 05 Oct 2023
AbstractforSuccessful weight regain attenuation by autologous fecal microbiota transplantation is associated with non-core gut microbiota changes during weight loss; randomized controlled trial | Full Text | References | PDF (1.2 MB) | EPUB | Supplemental
  • 2429 Views
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Open Access

Review

Review Article
Current insights on the roles of gut microbiota in inflammatory bowel disease-associated extra-intestinal manifestations: pathophysiology and therapeutic targets
Yizhe Tie, Yongle Huang, Rirong Chen, Li Li, Minhu Chen & Shenghong Zhang
Article: 2265028
Published online: 11 Oct 2023
AbstractforCurrent insights on the roles of gut microbiota in inflammatory bowel disease-associated extra-intestinal manifestations: pathophysiology and therapeutic targets | Full Text | References | PDF (4.1 MB) | EPUB
  • 2476 Views
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Research Paper

Article
Parvimonas micra, an oral pathobiont associated with colorectal cancer, epigenetically reprograms human colonocytes
Emma Bergsten, Denis Mestivier, Francoise Donnadieu, Thierry Pedron, Caroline Barau, Landry Tsoumtsa Meda, Amel Mettouchi, Emmanuel Lemichez, Olivier Gorgette, Mathias Chamaillard, Amaury Vaysse, Stevenn Volant, Abiba Doukani, Philippe J. Sansonetti, Iradj Sobhani & Giulia Nigro
Article: 2265138
Published online: 16 Oct 2023
AbstractforParvimonas micra, an oral pathobiont associated with colorectal cancer, epigenetically reprograms human colonocytes | Full Text | References | PDF (11.9 MB) | EPUB | Supplemental
  • 2103 Views
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Article
PUFAs add fuel to Crohn’s disease-associated AIEC-induced enteritis by exacerbating intestinal epithelial lipid peroxidation
Weiwei Wen, Yihan Xu, Wenwei Qian, Liangyu Huang, Jianfeng Gong, Yi Li, Weiming Zhu & Zhen Guo
Article: 2265578
Published online: 06 Oct 2023
AbstractforPUFAs add fuel to Crohn’s disease-associated AIEC-induced enteritis by exacerbating intestinal epithelial lipid peroxidation | Full Text | References | PDF (12.2 MB) | EPUB | Supplemental
  • 2477 Views
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Article
Mitochondrial dysfunction-associated microbiota establishes a transmissible refractory response to anti-TNF therapy during ulcerative colitis
Ainize Peña-Cearra, Janire Castelo, Jose Luis Lavín, Monika Gonzalez-Lopez, Miguel Angel Pascual-Itoiz, Miguel Fuertes, Virginia Gutiérrez de Juan, Laura Bárcena, Itziar Martín-Ruiz, Aize Pellón, Iratxe Seoane, Diego Barriales, Ainhoa Palacios, Asier Fullaondo, Iago Rodríguez-Lago, María L. Martinez-Chantar, Ana Mª Aransay, Hector Rodriguez, Juan Anguita & Leticia Abecia
Article: 2266626
Published online: 16 Oct 2023
AbstractforMitochondrial dysfunction-associated microbiota establishes a transmissible refractory response to anti-TNF therapy during ulcerative colitis | Full Text | References | PDF (3.6 MB) | EPUB | Supplemental
  • 2025 Views
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Brief Report

Brief Report
Industrialized human gut microbiota increases CD8+ T cells and mucus thickness in humanized mouse gut
Pajau Vangay, Tonya Ward, Sarah Lucas, Lalit K. Beura, Dominique Sabas, Max Abramson, Lisa Till, Susan L. Hoops, Purna Kashyap, Ryan C. Hunter, David Masopust & Dan Knights
Article: 2266627
Published online: 18 Oct 2023
AbstractforIndustrialized human gut microbiota increases CD8+ T cells and mucus thickness in humanized mouse gut | Full Text | References | PDF (3.8 MB) | EPUB | Supplemental
  • 1565 Views
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Meeting report

Meeting Report
Modulating microbiome-immune axis in the deployment-related chronic diseases of Veterans: report of an expert meeting
Jun Sun, M. Nedim Ince, Clara Abraham, Terrence Barrett, Lisa A. Brenner, Yingzi Cong, Reza Dashti, Pradeep K. Dudeja, David Elliott, Thomas S. Griffith, Peter S. Heeger, Andrew Hoisington, Kaikobad Irani, Tae Kon Kim, Neeraj Kapur, Joseph Leventhal, Mansour Mohamadzadeh, Ece Mutlu, Rodney Newberry, Jonathan U. Peled, Israel Rubinstein, Salyka Sengsayadeth, Chen Sabrina Tan, Xiao-Di Tan, Eric Tkaczyk, Jason Wertheim & Zheng Jenny Zhang
Article: 2267180
Published online: 16 Oct 2023
AbstractforModulating microbiome-immune axis in the deployment-related chronic diseases of Veterans: report of an expert meeting | Full Text | References | PDF (2.1 MB) | EPUB
  • 2667 Views
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Letter to the editor

Letter to the Editor
Microbial-host-isozyme: unveiling a new era in microbiome–host interaction
Lei Miao, Herbert Tilg & Ming-Hua Zheng
Article: 2267185
Published online: 10 Oct 2023
AbstractforMicrobial-host-isozyme: unveiling a new era in microbiome–host interaction | Full Text | References | PDF (324.4 KB) | EPUB | Supplemental
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Research Paper

Article
PM2.5 induced neurotoxicity through unbalancing vitamin B12 metabolism by gut microbiota disturbance
Xuan Zhu, Yanting Xia, Huanhuan Wang, Lihua Shi, Hongping Yin, Meier Gu & Fujie Yan
Article: 2267186
Published online: 16 Oct 2023
AbstractforPM2.5 induced neurotoxicity through unbalancing vitamin B12 metabolism by gut microbiota disturbance | Full Text | References | PDF (5.9 MB) | EPUB | Supplemental
  • 1547 Views
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Article
Quorum sensing modulates bacterial virulence and colonization dynamics of the gastrointestinal pathogen Citrobacter rodentium
Jorge Peña-Díaz, Sarah E. Woodward, Anna Creus-Cuadros, Antonio Serapio-Palacios, Stephanie Ortiz-Jiménez, Wanyin Deng & B. Brett Finlay
Article: 2267189
Published online: 16 Oct 2023
AbstractforQuorum sensing modulates bacterial virulence and colonization dynamics of the gastrointestinal pathogen Citrobacter rodentium | Full Text | References | PDF (4.3 MB) | EPUB | Supplemental
  • 1115 Views
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Article
Mimicry of microbially-derived butyrate reveals templates for potent intestinal epithelial HIF stabilizers
Alfredo Ornelas, Nichole Welch, Jacob A. Countess, Liheng Zhou, Ruth X. Wang, Alexander S. Dowdell & Sean P. Colgan
Article: 2267706
Published online: 11 Oct 2023
AbstractforMimicry of microbially-derived butyrate reveals templates for potent intestinal epithelial HIF stabilizers | Full Text | References | PDF (2.7 MB) | EPUB | Supplemental
  • 963 Views
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Review

Review Article
The microbiome and rise of early-onset cancers: knowledge gaps and research opportunities
Kosuke Mima, Tsuyoshi Hamada, Kentaro Inamura, Hideo Baba, Tomotaka Ugai & Shuji Ogino
Article: 2269623
Published online: 30 Oct 2023
AbstractforThe microbiome and rise of early-onset cancers: knowledge gaps and research opportunities | Full Text | References | PDF (2.7 MB) | EPUB
  • 3851 Views
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Research Paper

Article
A metagenomic analysis for combination therapy of multiple classes of antibiotics on the prevention of the spread of antibiotic-resistant genes
Matthew Igo, Lei Xu, Ashok Krishna, Sharron Stewart, Lin Xu, Zhihua Li, James L. Weaver, Heather Stone, Leonard Sacks, Timothy Bensman, Jeffry Florian, Rodney Rouse & Xiaomei Han
Article: 2271150
Published online: 31 Oct 2023
AbstractforA metagenomic analysis for combination therapy of multiple classes of antibiotics on the prevention of the spread of antibiotic-resistant genes | Full Text | References | PDF (6.6 MB) | EPUB | Supplemental
  • 1050 Views
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Research paper

Article
Cesarean section induced dysbiosis promotes type 2 immunity but not oxazolone-induced dermatitis in mice
Line Fisker Zachariassen, Maria Bernadette Bergh Ebert, Caroline Märta Junker Mentzel, Ling Deng, Lukasz Krych, Dennis Sandris Nielsen, Jakob Stokholm & Camilla Hartmann Friis Hansen
Article: 2271151
Published online: 27 Oct 2023
AbstractforCesarean section induced dysbiosis promotes type 2 immunity but not oxazolone-induced dermatitis in mice | Full Text | References | PDF (2.1 MB) | EPUB | Supplemental
  • 1064 Views
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Research Paper

Article
Ascorbate deficiency increases progression of shigellosis in guinea pigs and mice infection models
Jurate Skerniskyte, Céline Mulet, Antonin C. André, Mark C. Anderson, Louise Injarabian, Achim Buck, Verena M. Prade, Philippe J. Sansonetti, Sophie Reibel-Foisset, Axel K. Walch, Michel Lebel, Jens Lykkesfeldt & Benoit S. Marteyn
Article: 2271597
Published online: 24 Oct 2023
AbstractforAscorbate deficiency increases progression of shigellosis in guinea pigs and mice infection models | Full Text | References | PDF (4.3 MB) | EPUB | Supplemental
  • 988 Views
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Review

Review Article
Gut microbiome-targeted therapies for Alzheimer’s disease
Tao Zhang, Guangqi Gao, Lai-Yu Kwok & Zhihong Sun
Article: 2271613
Published online: 07 Nov 2023
AbstractforGut microbiome-targeted therapies for Alzheimer’s disease | Full Text | References | PDF (1.1 MB) | EPUB
  • 4982 Views
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Research Paper

Article
GlcNac produced by the gut microbiome enhances host influenza resistance by modulating NK cells
Xiaotong Hu, Xiaolu Sun, Ya Zhao, Changjie Iv, Xiaomei Sun, Meilin Jin & Qiang Zhang
Article: 2271620
Published online: 12 Nov 2023
AbstractforGlcNac produced by the gut microbiome enhances host influenza resistance by modulating NK cells | Full Text | References | PDF (5.4 MB) | EPUB | Supplemental
  • 1457 Views
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Article
Estradiol mediates colonic epithelial protection in aged mice after stroke and is associated with shifts in the gut microbiome
Juneyoung Lee, Pedram Peesh, Victoria Quaicoe, Chunfeng Tan, Anik Banerjee, Patrick Mooz, Bhanu P. Ganesh, Joseph Petrosino, Robert M. Bryan Jr, Louise D. McCullough & Venugopal Reddy Venna
Article: 2271629
Published online: 01 Nov 2023
AbstractforEstradiol mediates colonic epithelial protection in aged mice after stroke and is associated with shifts in the gut microbiome | Full Text | References | PDF (3.2 MB) | EPUB | Supplemental
  • 2073 Views
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Article
Gut microbiota regulates postprandial GLP-1 response via ileal bile acid-TGR5 signaling
Qiaoling Wang, Huibin Lin, Chongrong Shen, Minchun Zhang, Xingyu Wang, Miaomiao Yuan, Mingyang Yuan, Sheng Jia, Zhiwen Cao, Chao Wu, Banru Chen, Aibo Gao, Yufang Bi, Guang Ning, Weiqing Wang, Jiqiu Wang & Ruixin Liu
Article: 2274124
Published online: 09 Nov 2023
AbstractforGut microbiota regulates postprandial GLP-1 response via ileal bile acid-TGR5 signaling | Full Text | References | PDF (3 MB) | EPUB | Supplemental
  • 3095 Views
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Article
Magnetic chitin beads (MCB) coated with Vibrio cholerae reveals transcriptome dynamics in adult mice with a complex gut microbiota
Zi-Xin Qin, Guo-Zhong Chen, Wei Bao, Yao Ma, Xiao-Man Yang, Chun-Rong Yi, Mei Luo, Jun Hu & Zhi Liu
Article: 2274125
Published online: 07 Nov 2023
AbstractforMagnetic chitin beads (MCB) coated with Vibrio cholerae reveals transcriptome dynamics in adult mice with a complex gut microbiota | Full Text | References | PDF (5.1 MB) | EPUB
  • 854 Views
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Review

Review Article
Targeting gut microbiota: new therapeutic opportunities in multiple sclerosis
Dorota Kujawa, Lukasz Laczmanski, Slawomir Budrewicz, Anna Pokryszko-Dragan & Maria Podbielska
Article: 2274126
Published online: 18 Nov 2023
AbstractforTargeting gut microbiota: new therapeutic opportunities in multiple sclerosis | Full Text | References | PDF (2.4 MB) | EPUB
  • 2451 Views
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Research Paper

Article
Functional profiling of gut microbial and immune responses toward different types of dietary fiber: a step toward personalized dietary interventions
Jian Tan, Rosilene V. Ribeiro, Christopher Barker, Claire Daien, Erick De Abreu Silveira, Andrew Holmes, Ralph Nanan, Stephen J. Simpson & Laurence Macia
Article: 2274127
Published online: 09 Nov 2023
AbstractforFunctional profiling of gut microbial and immune responses toward different types of dietary fiber: a step toward personalized dietary interventions | Full Text | References | PDF (5.3 MB) | EPUB | Supplemental
  • 2379 Views
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Article
Fecal short-chain fatty acids in non-constipated irritable bowel syndrome: a potential clinically relevant stratification factor based on catabotyping analysis
Giorgio Gargari, Giacomo Mantegazza, Valentina Taverniti, Claudio Gardana, Alice Valenza, Federico Rossignoli, Maria Raffaella Barbaro, Giovanni Marasco, Cesare Cremon, Giovanni Barbara & Simone Guglielmetti
Article: 2274128
Published online: 01 Nov 2023
AbstractforFecal short-chain fatty acids in non-constipated irritable bowel syndrome: a potential clinically relevant stratification factor based on catabotyping analysis | Full Text | References | PDF (4.1 MB) | EPUB | Supplemental
  • 2015 Views
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Article
Escherichia coli triggers α-synuclein pathology in the LRRK2 transgenic mouse model of PD
Dongxiao Liang, Han Liu, Ruoqi Jin, Renyi Feng, Jiuqi Wang, Chi Qin, Rui Zhang, Yongkang Chen, Jingwen Zhang, Junfang Teng, Beisha Tang, Xuebing Ding & Xuejing Wang
Article: 2276296
Published online: 27 Nov 2023
AbstractforEscherichia coli triggers α-synuclein pathology in the LRRK2 transgenic mouse model of PD | Full Text | References | PDF (9.4 MB) | EPUB | Supplemental
  • 1877 Views
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Review

Review Article
Gut microbiota and tumor-associated macrophages: potential in tumor diagnosis and treatment
Dongqin Zhou & Yongsheng Li
Article: 2276314
Published online: 09 Nov 2023
AbstractforGut microbiota and tumor-associated macrophages: potential in tumor diagnosis and treatment | Full Text | References | PDF (4.3 MB) | EPUB
  • 1626 Views
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Research Paper

Article
Alterations in intestinal Archaea composition in pediatric patients with Crohn’s disease based on next-generation sequencing – a pilot study
A. Krawczyk, T. Gosiewski, B. Zapała, K. Kowalska-Duplaga & D. Salamon
Article: 2276806
Published online: 13 Nov 2023
AbstractforAlterations in intestinal Archaea composition in pediatric patients with Crohn’s disease based on next-generation sequencing – a pilot study | Full Text | References | PDF (1.8 MB) | EPUB
  • 1125 Views
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Article
Modulating the gut microbiota is involved in the effect of low-molecular-weight Glycyrrhiza polysaccharide on immune function
Wangdi Song, Yunyun Wang, Gongcheng Li, Shengnan Xue, Genlin Zhang, Yanyan Dang & Hebin Wang
Article: 2276814
Published online: 10 Nov 2023
AbstractforModulating the gut microbiota is involved in the effect of low-molecular-weight Glycyrrhiza polysaccharide on immune function | Full Text | References | PDF (7.6 MB) | EPUB | Supplemental
  • 2352 Views
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Article
Gut microbiota and child behavior in early puberty: does child sex play a role?
Yangwenshan Ou, Eline Rots, Clara Belzer, Hauke Smidt & Carolina de Weerth
Article: 2278222
Published online: 09 Nov 2023
AbstractforGut microbiota and child behavior in early puberty: does child sex play a role? | Full Text | References | PDF (2.3 MB) | EPUB | Supplemental
  • 858 Views
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Review

Review Article
Gut microbiome in healthy aging versus those associated with frailty
Mi Young Lim & Young-Do Nam
Article: 2278225
Published online: 15 Nov 2023
AbstractforGut microbiome in healthy aging versus those associated with frailty | Full Text | References | PDF (1 MB) | EPUB
  • 2775 Views
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Research Paper

Article
Why are so many enteric pathogen infections asymptomatic? Pathogen and gut microbiome characteristics associated with diarrhea symptoms and carriage of diarrheagenic E. coli in northern Ecuador
Kelsey J Jesser, Gabriel Trueba, Konstantinos T. Konstantinidis & Karen Levy
Article: 2281010
Published online: 22 Nov 2023
AbstractforWhy are so many enteric pathogen infections asymptomatic? Pathogen and gut microbiome characteristics associated with diarrhea symptoms and carriage of diarrheagenic E. coli in northern Ecuador | Full Text | References | PDF (2.9 MB) | EPUB | Supplemental
  • 1166 Views
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Article
Butyrate reduces adherent-invasive E. coli-evoked disruption of epithelial mitochondrial morphology and barrier function: involvement of free fatty acid receptor 3
Samira A. Hamed, Armaan Mohan, Saranya Navaneetha Krishnan, Arthur Wang, Marija Drikic, Nicole L. Prince, Ian A. Lewis, Jane Shearer, Åsa V. Keita, Johan D. Söderholm, Timothy E. Shutt & Derek M. McKay
Article: 2281011
Published online: 11 Dec 2023
AbstractforButyrate reduces adherent-invasive E. coli-evoked disruption of epithelial mitochondrial morphology and barrier function: involvement of free fatty acid receptor 3 | Full Text | References | PDF (3.7 MB) | EPUB | Supplemental
  • 2543 Views
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Methods

Method
Detecting host responses to microbial stimulation using primary epithelial organoids
Jette Bornholdt, Christina V. Müller, Maria Juul Nielsen, Jesper Strickertsson, Daria Rago, Yun Chen, Grzegorz Maciag, Jonathan Skov, Anja Wellejus, Pawel J. Schweiger, Stine L. Hansen, Christa Broholm, Ismail Gögenur, Martti Maimets, Stine Sloth, Jakob Hendel, Adam Baker, Albin Sandelin & Kim B. Jensen
Article: 2281012
Published online: 22 Nov 2023
AbstractforDetecting host responses to microbial stimulation using primary epithelial organoids | Full Text | References | PDF (2.1 MB) | EPUB | Supplemental
  • 2239 Views
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Research Paper

Article
Gut-microbiota prompt activation of natural killer cell on alcoholic liver disease
Jung A Eom, Jin-Ju Jeong, Sang Hak Han, Goo Hyun Kwon, Kyeong Jin Lee, Haripriya Gupta, Satya Priya Sharma, Sung-Min Won, Ki-Kwang Oh, Sang Jun Yoon, Hyun Chae Joung, Kyung Hwan Kim, Dong Joon Kim & Ki Tae Suk
Article: 2281014
Published online: 21 Nov 2023
AbstractforGut-microbiota prompt activation of natural killer cell on alcoholic liver disease | Full Text | References | PDF (5.5 MB) | EPUB | Supplemental
  • 2146 Views
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Article
Inhibition of intestinal FXR activity as a possible mechanism for the beneficial effects of a probiotic mix supplementation on lipid metabolism alterations and weight gain in mice fed a high fat diet
Alice Beau, Bérengère Benoit, Mélanie Le Barz, Emmanuelle Meugnier, Armelle Penhoat, Catherine Calzada, Claudie Pinteur, Emmanuelle Loizon, Stéphanie Chanon, Aurélie Vieille-Marchiset, Valérie Sauvinet, Murielle Godet, Fabienne Laugerette, Sophie Holowacz, Elsa Jacouton, Marie-Caroline Michalski & Hubert Vidal
Article: 2281015
Published online: 20 Nov 2023
AbstractforInhibition of intestinal FXR activity as a possible mechanism for the beneficial effects of a probiotic mix supplementation on lipid metabolism alterations and weight gain in mice fed a high fat diet | Full Text | References | PDF (2.9 MB) | EPUB | Supplemental
  • 2145 Views
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Article
ArcB orchestrates the quorum-sensing system to regulate type III secretion system 1 in Vibrio parahaemolyticus
Ce Zhang, Min Liu, Ying Wu, Xixi Li, Chen Zhang, Douglas R. Call, Ming Liu & Zhe Zhao
Article: 2281016
Published online: 20 Nov 2023
AbstractforArcB orchestrates the quorum-sensing system to regulate type III secretion system 1 in Vibrio parahaemolyticus | Full Text | References | PDF (4.1 MB) | EPUB | Supplemental
  • 1040 Views
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Review

Review Article
Pharmacomicrobiomics of cell-cycle specific anti-cancer drugs – is it a new perspective for personalized treatment of cancer patients?
Karolina Kaźmierczak-Siedlecka, Nikola Bulman, Paweł Ulasiński, Bartosz Kamil Sobocki, Karol Połom, Luigi Marano, Leszek Kalinowski & Karolina Skonieczna-Żydecka
Article: 2281017
Published online: 20 Nov 2023
AbstractforPharmacomicrobiomics of cell-cycle specific anti-cancer drugs – is it a new perspective for personalized treatment of cancer patients? | Full Text | References | PDF (993.9 KB) | EPUB
  • 1154 Views
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Research Paper

Article
Multi-omics analyses demonstrate the modulating role of gut microbiota on the associations of unbalanced dietary intake with gastrointestinal symptoms in children with autism spectrum disorder
Hailin Li, Churui Liu, Saijun Huang, Xin Wang, Muqing Cao, Tingfeng Gu, Xiaoxuan Ou, Shuolin Pan, Zongyu Lin, Xiaotong Wang, Yanna Zhu & Jin Jing
Article: 2281350
Published online: 27 Nov 2023
AbstractforMulti-omics analyses demonstrate the modulating role of gut microbiota on the associations of unbalanced dietary intake with gastrointestinal symptoms in children with autism spectrum disorder | Full Text | References | PDF (6.5 MB) | EPUB | Supplemental
  • 1920 Views
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Article
Gut feelings: the relations between depression, anxiety, psychotropic drugs and the gut microbiome
S. Brushett, R. Gacesa, A. Vich Vila, M.F. Brandao Gois, S. Andreu-Sánchez, J.C. Swarte, M.A.Y. Klaassen, V. Collij, T. Sinha, L.A. Bolte, J. Wu, Lifelines Cohort Study, Lifelines Corona Research Initiative, M. Swertz, M.L.A. de Kroon, S.A. Reijneveld, C. Wijmenga, R.K. Weersma, J. Fu, H.M. van Loo, A. Kurilshikov & A. Zhernakova
Article: 2281360
Published online: 28 Nov 2023
AbstractforGut feelings: the relations between depression, anxiety, psychotropic drugs and the gut microbiome | Full Text | References | PDF (2.1 MB) | EPUB | Supplemental
  • 2901 Views
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Article
The gut-joint axis mediates the TNF-induced RA process and PBMT therapeutic effects through the metabolites of gut microbiota
Qingtai Meng, Monan Lin, Wuqi Song, Jiahui Wu, Guoding Cao, Ping Huang, Zaiyu Su, Wei Gu, Xueqing Deng, Peng Xu, Yi Yang, Hui Li, Hailiang Liu & Fengmin Zhang
Article: 2281382
Published online: 28 Nov 2023
AbstractforThe gut-joint axis mediates the TNF-induced RA process and PBMT therapeutic effects through the metabolites of gut microbiota | Full Text | References | PDF (8.1 MB) | EPUB | Supplemental
  • 903 Views
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Article
Loss of claudin-3 expression increases colitis risk by promoting Gut Dysbiosis
Rizwan Ahmad, Balawant Kumar, Ishwor Thapa, Geoffrey A. Talmon, Jeffrey Salomon, Amanda E. Ramer-Tait, Dhundy K. Bastola, Punita Dhawan & Amar B. Singh
Article: 2282789
Published online: 27 Nov 2023
AbstractforLoss of claudin-3 expression increases colitis risk by promoting Gut Dysbiosis | Full Text | References | PDF (15.8 MB) | EPUB | Supplemental
  • 1478 Views
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Open Access
Article
Multi-omics data reveals aberrant gut microbiota-host glycerophospholipid metabolism in association with neuroinflammation in APP/PS1 mice
Xiaohang Qian, Wangxi Hai, Siyue Chen, Miao Zhang, Xufeng Jiang & Huidong Tang
Article: 2282790
Published online: 22 Nov 2023
AbstractforMulti-omics data reveals aberrant gut microbiota-host glycerophospholipid metabolism in association with neuroinflammation in APP/PS1 mice | Full Text | References | PDF (4.9 MB) | EPUB | Supplemental
  • 3587 Views
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Article
Gut microbiome and frailty: insight from genetic correlation and mendelian randomization
Guanghui Cui, Shaojie Li, Hui Ye, Yao Yang, Xiaofen Jia, Miaomiao Lin, Yingming Chu, Yue Feng, Zicheng Wang, Zongming Shi & Xuezhi Zhang
Article: 2282795
Published online: 21 Nov 2023
AbstractforGut microbiome and frailty: insight from genetic correlation and mendelian randomization | Full Text | References | PDF (3.2 MB) | EPUB | Supplemental
  • 4741 Views
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Article
Engraftment of aging-related human gut microbiota and the effect of a seven-species consortium in a pre-clinical model
Huimin Ye, Tarini S. Ghosh, Cara M. Hueston, Klara Vlckova, Anna V. Golubeva, Niall P. Hyland & Paul W. O’Toole
Article: 2282796
Published online: 27 Nov 2023
AbstractforEngraftment of aging-related human gut microbiota and the effect of a seven-species consortium in a pre-clinical model | Full Text | References | PDF (5 MB) | EPUB | Supplemental
  • 1446 Views
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Article
Diet-induced shifts in the gut microbiota influence anastomotic healing in a murine model of colonic surgery
Sonja Boatman, Thomas Kaiser, Harika Nalluri-Butz, Mohammad Haneef Khan, Matthew Dietz, Julia Kohn, Abigail J Johnson, Wolfgang B Gaertner, Christopher Staley & Cyrus Jahansouz
Article: 2283147
Published online: 22 Nov 2023
AbstractforDiet-induced shifts in the gut microbiota influence anastomotic healing in a murine model of colonic surgery | Full Text | References | PDF (2.3 MB) | EPUB | Supplemental
  • 1080 Views
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Brief Report

Brief Report
Nuanced contribution of gut microbiome in the early brain development of mice
Xin Yi Yeo, Woo Ri Chae, Hae Ung Lee, Han-Gyu Bae, Sven Pettersson, Joanes Grandjean, Weiping Han & Sangyong Jung
Article: 2283911
Published online: 27 Nov 2023
AbstractforNuanced contribution of gut microbiome in the early brain development of mice | Full Text | References | PDF (2.9 MB) | EPUB | Supplemental
  • 1005 Views
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Research Paper

Article
Reversible aberrancies in gut microbiome of moderate and late preterm infants: results from a randomized, controlled trial
Raakel Luoto, Anna Pärtty, Josef K. Vogt, Samuli Rautava & Erika Isolauri
Article: 2283913
Published online: 27 Nov 2023
AbstractforReversible aberrancies in gut microbiome of moderate and late preterm infants: results from a randomized, controlled trial | Full Text | References | PDF (2.1 MB) | EPUB
  • 1807 Views
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Brief Report

Brief Report
Gut microbiota induces weight gain and inflammation in the gut and adipose tissue independent of manipulations in diet, genetics, and immune development
Devesha H. Kulkarni, Brigida Rusconi, Alexandria N. Floyd, Elisabeth L. Joyce, Khushi B. Talati, Hrishi Kousik, Dereck Alleyne, Dalia L. Harris, Lorena Garnica, Ryan McDonough, Shay S. Bidani, Hrishikesh S. Kulkarni, Elizabeth P. Newberry, Keely G. McDonald & Rodney D. Newberry
Article: 2284240
Published online: 30 Nov 2023
AbstractforGut microbiota induces weight gain and inflammation in the gut and adipose tissue independent of manipulations in diet, genetics, and immune development | Full Text | References | PDF (2.2 MB) | EPUB
  • 1588 Views
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Research Paper

Article
Efficacy of fecal microbiota transplantation in patients with Parkinson’s disease: clinical trial results from a randomized, placebo-controlled design
Yi Cheng, Guohua Tan, Qihui Zhu, Chun Wang, Guangcong Ruan, Senhong Ying, Jinlong Qie, Xiaofei Hu, Zhifeng Xiao, Fenghua Xu, Lu Chen, Minjia Chen, Yang Pei, Hao Zhang, Yuting Tian, Dongfeng Chen, Xingyin Liu, Heqing Huang & Yanling Wei
Article: 2284247
Published online: 06 Dec 2023
AbstractforEfficacy of fecal microbiota transplantation in patients with Parkinson’s disease: clinical trial results from a randomized, placebo-controlled design | Full Text | References | PDF (2.9 MB) | EPUB | Supplemental
  • 3272 Views
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Commentary and view

Comment
Axin1‘s mystique in manipulating microbiome amidst colitis
Shari Garrett, Monica C. Asada & Jun Sun
Article: 2286674
Published online: 27 Nov 2023
AbstractforAxin1‘s mystique in manipulating microbiome amidst colitis | Full Text | References | PDF (636.5 KB) | EPUB
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Research Paper

Article
Evolution of E. coli in a mouse model of inflammatory bowel disease leads to a disease-specific bacterial genotype and trade-offs with clinical relevance
Rahul Unni, Nadia Andrea Andreani, Marie Vallier, Silke S. Heinzmann, Jan Taubenheim, Martina A. Guggeis, Florian Tran, Olga Vogler, Sven Künzel, Jan-Bernd Hövener, Philip Rosenstiel, Christoph Kaleta, Astrid Dempfle, Daniel Unterweger & John F. Baines
Article: 2286675
Published online: 07 Dec 2023
AbstractforEvolution of E. coli in a mouse model of inflammatory bowel disease leads to a disease-specific bacterial genotype and trade-offs with clinical relevance | Full Text | References | PDF (3.8 MB) | EPUB | Supplemental
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Review

Review Article
Gut microbiome-associated predictors as biomarkers of response to advanced therapies in inflammatory bowel disease: a systematic review
Susanna Meade, Jeremy Liu Chen Kiow, Cristian Massaro, Gurpreet Kaur, Elizabeth Squirell, Brian Bressler & Genelle Lunken
Article: 2287073
Published online: 03 Dec 2023
AbstractforGut microbiome-associated predictors as biomarkers of response to advanced therapies in inflammatory bowel disease: a systematic review | Full Text | References | PDF (2.5 MB) | EPUB | Supplemental
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Article
Unveiling Candida albicans intestinal carriage in healthy volunteers: the role of micro- and mycobiota, diet, host genetics and immune response
Margot Delavy, Natacha Sertour, Etienne Patin, Emmanuelle Le Chatelier, Nathaniel Cole, Florian Dubois, Zixuan Xie, Violaine Saint-André, Chaysavanh Manichanh, Alan W. Walker, Lluis Quintana-Murci, Darragh Duffy, Christophe d’Enfert, Marie-Elisabeth Bougnoux & Milieu Intérieur Consortium
Article: 2287618
Published online: 28 Nov 2023
AbstractforUnveiling Candida albicans intestinal carriage in healthy volunteers: the role of micro- and mycobiota, diet, host genetics and immune response | Full Text | References | PDF (4.3 MB) | EPUB | Supplemental
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Article
Alterations in gut virome are associated with cognitive function and minimal hepatic encephalopathy cross-sectionally and longitudinally in cirrhosis
Thananya Jinato, Masoumeh Sikaroodi, Andrew Fagan, Richard K Sterling, Hannah Lee, Puneet Puri, Brian C Davis, Michael Fuchs, Edith Gavis, Patrick M Gillevet & Jasmohan S Bajaj
Article: 2288168
Published online: 27 Nov 2023
AbstractforAlterations in gut virome are associated with cognitive function and minimal hepatic encephalopathy cross-sectionally and longitudinally in cirrhosis | Full Text | References | PDF (6.8 MB) | EPUB | Supplemental
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Article
Fecal microbiota transplanted from old mice promotes more colonic inflammation, proliferation, and tumor formation in azoxymethane-treated A/J mice than microbiota originating from young mice
Nicholas A. Crossland, Samuel Beck, Wei Yu Tan, Ming Lo, Joel B. Mason, Chao Zhang, Weimin Guo & Jimmy W. Crott
Article: 2288187
Published online: 29 Nov 2023
AbstractforFecal microbiota transplanted from old mice promotes more colonic inflammation, proliferation, and tumor formation in azoxymethane-treated A/J mice than microbiota originating from young mice | Full Text | References | PDF (2.8 MB) | EPUB | Supplemental
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Article
Characterization of markers, functional properties, and microbiome composition in human gut-derived bacterial extracellular vesicles
Chih-Chi Li, Wei-Fan Hsu, Po-Chieh Chiang, Ming-Che Kuo, Andrew M. Wo & Yufeng Jane Tseng
Article: 2288200
Published online: 01 Dec 2023
AbstractforCharacterization of markers, functional properties, and microbiome composition in human gut-derived bacterial extracellular vesicles | Full Text | References | PDF (12.1 MB) | EPUB | Supplemental
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Article
Gut microbiota-derived 12-ketolithocholic acid suppresses the IL-17A secretion from colonic group 3 innate lymphoid cells to prevent the acute exacerbation of ulcerative colitis
Na Li, Peiguang Ma, Yalan Li, Xuekai Shang, Xinmei Nan, Lei Shi, Xiao Han, Jiajing Liu, Yanfei Hong, Qiuyi Li, Jiaqi Cui, Junxiang Li & Guiying Peng
Article: 2290315
Published online: 08 Dec 2023
AbstractforGut microbiota-derived 12-ketolithocholic acid suppresses the IL-17A secretion from colonic group 3 innate lymphoid cells to prevent the acute exacerbation of ulcerative colitis | Full Text | References | PDF (18.1 MB) | EPUB | Supplemental
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Article
Gut microbiota links to serum ferritin and cognition
Marisel Rosell-Díaz, Elena Santos-González, Anna Motger-Albertí, Lluís Ramió-Torrentà, Josep Garre-Olmo, Vicente Pérez-Brocal, Andrés Moya, Mariona Jové, Reinald Pamplona, Josep Puig, Rafael Ramos, José Manuel Fernández-Real & Jordi Mayneris-Perxachs
Article: 2290318
Published online: 07 Dec 2023
AbstractforGut microbiota links to serum ferritin and cognition | Full Text | References | PDF (4.7 MB) | EPUB | Supplemental
  • 2617 Views
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Article
Disentangling the age-related manner in the associations between gut microbiome and women’s health: a multi-cohort microbiome study
Chao Dong, Quanquan Guan, Wei Xu, Xiaochen Zhang, Bowen Jin, Shumin Yu, Xiaoyu Xu & Yankai Xia
Article: 2290320
Published online: 07 Dec 2023
AbstractforDisentangling the age-related manner in the associations between gut microbiome and women’s health: a multi-cohort microbiome study | Full Text | References | PDF (5.9 MB) | EPUB | Supplemental
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Review

Review Article
Targeting gut microbiota in aging-related cardiovascular dysfunction: focus on the mechanisms
Siqi Liu, Yufeng He, Yali Zhang, Zhaolun Zhang, Keming Huang, Li Deng, Bin Liao, Yi Zhong & Jian Feng
Article: 2290331
Published online: 10 Dec 2023
AbstractforTargeting gut microbiota in aging-related cardiovascular dysfunction: focus on the mechanisms | Full Text | References | PDF (2 MB) | EPUB
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Review Article
The impact of aging-induced gut microbiome dysbiosis on dendritic cells and lung diseases
Jonaid Ahmad Malik, Mohammad Adeel Zafar, Taruna Lamba, Sidhanta Nanda, Mohammad Affan Khan & Javed Naim Agrewala
Article: 2290643
Published online: 12 Dec 2023
AbstractforThe impact of aging-induced gut microbiome dysbiosis on dendritic cells and lung diseases | Full Text | References | PDF (2.3 MB) | EPUB
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Review Article
Bifidobacterium mechanisms of immune modulation and tolerance
Samuel J Gavzy, Allison Kensiski, Zachariah L Lee, Emmanuel F Mongodin, Bing Ma & Jonathan S Bromberg
Article: 2291164
Published online: 06 Dec 2023
AbstractforBifidobacterium mechanisms of immune modulation and tolerance | Full Text | References | PDF (1.3 MB) | EPUB
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Research Paper

Article
Metaproteomic assessment of gut microbial and host functional perturbations in Helicobacter pylori-infected patients subjected to an antimicrobial protocol
Marcello Abbondio, Alessandro Tanca, Laura De Diego, Rosangela Sau, Stefano Bibbò, Giovanni Mario Pes, Maria Pina Dore & Sergio Uzzau
Article: 2291170
Published online: 08 Dec 2023
AbstractforMetaproteomic assessment of gut microbial and host functional perturbations in Helicobacter pylori-infected patients subjected to an antimicrobial protocol | Full Text | References | PDF (7 MB) | EPUB | Supplemental
  • 1500 Views
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Article
Akkermansia muciniphila protects the intestine from irradiation-induced injury by secretion of propionic acid
Kai-Yue He, Xin-Yuan Lei, Dan-Hui Wu, Lei Zhang, Jun-Qi Li, Qiu-Tong Li, Wei-Tao Yin, Zi-Long Zhao, Huai Liu, Xiong-Yan Xiang, Ling-Jun Zhu, Cui-Yun Cui, Ke-Ke Wang, Jin-Hua Wang, Lin Lv, Qian-Hui Sun, Guo-Long Liu, Zhi-Xiang Xu & Yong-Ping Jian
Article: 2293312
Published online: 12 Dec 2023
AbstractforAkkermansia muciniphila protects the intestine from irradiation-induced injury by secretion of propionic acid | Full Text | References | PDF (6.7 MB) | EPUB | Supplemental
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