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Soil Science and Plant Nutrition Volume 50, 2004 - Issue 4
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Original Papers: Soil Biology

Succession and phylogenetic profile of methanogenic archaeal communities during the composting process of rice straw estimated by PCR-DGGE analysis

Vita Ratri Cahyani Soil Biology Laboratory, Department / Study Program of Soil Science, Faculty of Agriculture, Sebelas Maret University, JI. Ir Sutami No. 36A Kentingan Surakarta, Jawa, Tengah, 57126, Indonesia; Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, 464-8601, Japan
,
Kazua Matsuya Aichi-ken Anjo Research and Extension Center, Anjo, 446-0073, Japan
,
Susumu Asakawa Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, 464-8601, Japan
&
Makata Kimura Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, 464-8601, Japan
Pages 555-563 | Received 15 Jan 2004, Accepted 02 Feb 2004, Published online: 14 Sep 2011

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Susumu Asakawa. (2021) Ecology of methanogenic and methane-oxidizing microorganisms in paddy soil ecosystem. Soil Science and Plant Nutrition 67:5, pages 520-526.
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Vita Ratri Cahyani, Jun Murase, Susumu Asakawa & Makoto Kimura. (2009) Change in T4-type bacteriophage communities during the composting process of rice straw: Estimation from the major capsid gene (g23) sequences. Soil Science and Plant Nutrition 55:4, pages 468-477.
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Vita Ratri Cahyani, Jun Murase, Eiji Ishibashi, Susumu Asakawa & Makoto Kimura. (2007) Bacterial communities in manganese nodules in rice field subsoils: Estimation using PCR-DGGE and sequencing analyses. Soil Science and Plant Nutrition 53:5, pages 575-584.
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Articles from other publishers (13)

V R Cahyani, Rahayu, Hadiwiyono, E Purwanto, A T Sakya, N Y Azzahra & K P Lakshitarsari. (2021) Effect of lignocellulolytic microorganisms isolated from the peel of cassava, rice straw, and sawdust for the composting process of rice straw. IOP Conference Series: Earth and Environmental Science 905:1, pages 012114.
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Takeshi WATANABE, Susumu ASAKAWA & Koichi HAYANO. (2020) Long-term submergence of non-methanogenic oxic upland field soils helps to develop the methanogenic archaeal community as revealed by pot and field experiments. Pedosphere 30:1, pages 62-72.
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Nozomi Yamamoto & Yutaka Nakai. 2019. Understanding Terrestrial Microbial Communities. Understanding Terrestrial Microbial Communities 151 172 .
Sang Yoon Kim, Seung Tak Jeong, Adrian Ho, Chang Oh Hong, Chang Hoon Lee & Pil Joo Kim. (2018) Cattle manure composting: Shifts in the methanogenic community structure, chemical composition, and consequences on methane production potential in a rice paddy. Applied Soil Ecology 124, pages 344-350.
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Ruirui Chen, Yiming Wang, Shiping Wei, Wei Wang & Xiangui Lin. (2014) Windrow composting mitigated CH4 emissions: characterization of methanogenic and methanotrophic communities in manure management. FEMS Microbiology Ecology 90:3, pages 575-586.
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Letícia Arruda, Anelise Beneduzzi, Bruno Lisboa, Luciane Passaglia & Luciano K Vargas. 2014. Bacterial Diversity in Sustainable Agriculture. Bacterial Diversity in Sustainable Agriculture 167 189 .
Prem Prashant Chaudhary, Lenka Brablcová, Iva Buriánková & Martin Rulík. (2013) Molecular diversity and tools for deciphering the methanogen community structure and diversity in freshwater sediments. Applied Microbiology and Biotechnology 97:17, pages 7553-7562.
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Nozomi Yamamoto, Ryoki Asano, Hiroki Yoshii, Kenichi Otawa & Yutaka Nakai. (2011) Archaeal community dynamics and detection of ammonia-oxidizing archaea during composting of cattle manure using culture-independent DNA analysis. Applied Microbiology and Biotechnology 90:4, pages 1501-1510.
Crossref
Takeshi Watanabe, Makoto Kimura & Susumu Asakawa. (2010) Diversity of methanogenic archaeal communities in Japanese paddy field ecosystem, estimated by denaturing gradient gel electrophoresis. Biology and Fertility of Soils 46:4, pages 343-353.
Crossref
Jian JIN, Guang-Hua WANG, Xiao-Bing LIU, Jü-Dong LIU, Xue-Li CHEN & S.J. HERBERT. (2009) Temporal and Spatial Dynamics of Bacterial Community in the Rhizosphere of Soybean Genotypes Grown in a Black Soil. Pedosphere 19:6, pages 808-816.
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Guanghua Wang, Yanxia Xu, Jian Jin, Judong Liu, Qiuying Zhang & Xiaobing Liu. (2008) Effect of soil type and soybean genotype on fungal community in soybean rhizosphere during reproductive growth stages. Plant and Soil 317:1-2, pages 135-144.
Crossref
Kathrin Thummes, Peter Kämpfer & Udo Jäckel. (2007) Temporal change of composition and potential activity of the thermophilic archaeal community during the composting of organic material. Systematic and Applied Microbiology 30:5, pages 418-429.
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Ralf Conrad. 2007. 1 63 .

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