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João T.S. Coimbra, Sérgio F. Sousa, Pedro A. Fernandes, Maria Rangel & Maria J. Ramos. (2014) Biomembrane simulations of 12 lipid types using the general amber force field in a tensionless ensemble. Journal of Biomolecular Structure and Dynamics 32:1, pages 88-103.
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Alfonso De Simone, Francesca Stanzione, Daniela Marasco, Luigi Vitagliano & Luciana Esposito. (2013) The intrinsic stability of the human prion β-sheet region investigated by molecular dynamics. Journal of Biomolecular Structure and Dynamics 31:5, pages 441-452.
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Karina
S. Matos, Elaine
F.F. da Cunha, Arlan da Silva Gonçalves, Alan Wilter, Kamil Kuča, Tanos
C.C. França & Teodorico
C. Ramalho. (2012) First principles calculations of thermodynamics and kinetic parameters and molecular dynamics simulations of acetylcholinesterase reactivators: can mouse data provide new insights into humans?. Journal of Biomolecular Structure and Dynamics 30:5, pages 546-558.
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Atta Ahmad, ColinS. Burns, AnthonyL. Fink & VladimirN. Uversky. (2012) Peculiarities of Copper Binding to α-Synuclein. Journal of Biomolecular Structure and Dynamics 29:4, pages 825-842.
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Esmaeil Behmard, Parviz Abdolmaleki, Ebrahim
Barzegari Asadabadi & Samad Jahandideh. (2011) Prevalent Mutations of Human Prion Protein: A Molecular Modeling and Molecular Dynamics Study. Journal of Biomolecular Structure and Dynamics 29:2, pages 379-389.
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Jiapu Zhang. (2011) The Structural Stability of Wild-type Horse Prion Protein. Journal of Biomolecular Structure and Dynamics 29:2, pages 369-377.
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AlineA. Oliveira, MagdalenaN. Rennó, César
A. S. de Matos, MorenaD. Bertuzzi, TeodoricoC. Ramalho, Carlos
A.M. Fraga & Tanos
C. C. França. (2011) Molecular Modeling Studies of Yersinia pestis Dihydrofolate Reductase. Journal of Biomolecular Structure and Dynamics 29:2, pages 351-367.
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Ping Li, Jian
Jun Tan, Ming Liu, Xiao
Yi Zhang, Wei
Zu Chen & Cun
Xin Wang. (2011) Insight into the Inhibitory Mechanism and Binding Mode Between D77 and HIV-1 Integrase by Molecular Modeling Methods. Journal of Biomolecular Structure and Dynamics 29:2, pages 311-323.
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Riddhi Majumder, Sujata Roy & Ashoke
Ranjan Thakur. (2011) Molecular Modeling and Molecular Dynamics Simulation Studies of Delta-Notch Complex. Journal of Biomolecular Structure and Dynamics 29:2, pages 297-310.
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Adeleh Divsalar, Ali
Akbar Saboury, Leila Ahadi, Elham Zemanatiyar, Hassan Mansouri-Torshizi, Davood Ajloo & RamaswamyH. Sarma. (2011) Biological Evaluation and Interaction of a Newly Designed Anti-cancer Pd(II) Complex and Human Serum Albumin. Journal of Biomolecular Structure and Dynamics 29:2, pages 283-296.
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WilianA. Cortopassi, AlineA. Oliveira, AnaP. Guimarães, MagdalenaN. Rennó, AntonianaU. Krettli & Tanos
C.C. França. (2011) Docking Studies on the Binding of Quinoline Derivatives and Hematin to Plasmodium Falciparum Lactate Dehydrogenase. Journal of Biomolecular Structure and Dynamics 29:1, pages 207-218.
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Zahra Omidvar, Kazem Parivar, Hamideh Sanee, Zeinab Amiri-Tehranizadeh, Ali Baratian, Mohammad
Reza Saberi, Ahmad Asoodeh & Jamshidkhan Chamani. (2011) Investigations with Spectroscopy, Zeta Potential and Molecular Modeling of the Non-Cooperative Behaviour Between Cyclophosphamide Hydrochloride and Aspirin upon Interaction with Human Serum Albumin: Binary and Ternary Systems from the View Point of Multi-Drug Therapy. Journal of Biomolecular Structure and Dynamics 29:1, pages 181-206.
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Sudipta Pal, Mili Das, Rahul Banerjee & Dipak Dasgupta. (2011) Biphasic Association of T7 RNA Polymerase and a Nucleotide Analogue, Cibacron Blue as a Model to Understand the Role of Initiating Nucleotide in the Mechanism of Enzyme Action. Journal of Biomolecular Structure and Dynamics 29:1, pages 153-164.
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JaysonF. Varughese & Yumin Li. (2011) Molecular Dynamics and Docking Studies on Cardiac Troponin C. Journal of Biomolecular Structure and Dynamics 29:1, pages 123-135.
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Ji
Guo Su, Xian
Jin Xu, Chun
Hua Li, Wei
Zu Chen & Cun
Xin Wang. (2011) An Analysis of the Influence of Protein Intrinsic Dynamical Properties on its Thermal Unfolding Behavior. Journal of Biomolecular Structure and Dynamics 29:1, pages 105-121.
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Kolattukudy P Santo, Mark Berjanskii, David S Wishart & Maria Stepanova. (2011) Comparative analysis of essential collective dynamics and NMR-derived flexibility profiles in evolutionarily diverse prion proteins. Prion 5:3, pages 188-200.
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AlexeiN. Pankratov, OlgaM. Tsivileva, BorisI. Drevko & ValentinaE. Nikitina. (2011) Compounds of the 1,5-di(4-R-phenyl)-3-selenopentanediones-1,5 series interaction with the Basidiomycete Lentinula edodes, lectins: Computations and Experiment. Journal of Biomolecular Structure and Dynamics 28:6, pages 969-974.
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ShaguftaH. Khan, Faizan Ahmad, Nihal Ahmad, DanielC. Flynn & Raj Kumar. (2011) Protein-Protein Interactions: Principles, Techniques, and their Potential Role in New Drug Development. Journal of Biomolecular Structure and Dynamics 28:6, pages 929-938.
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MalihehS. Atri, AliA. Saboury, AliA. Moosavi-Movahedi, Bahram Goliaei, Yahya Sefidbakht, Hamid
Hadi Alijanvand, Ahmad Sharifzadeh & Amir Niasari-Naslaji. (2011) Structure and Stability Analysis of Cytotoxic Complex of Camel α-Lactalbumin and Unsaturated Fatty Acids Produced at High Temperature. Journal of Biomolecular Structure and Dynamics 28:6, pages 919-928.
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TeodoricoC. Ramalho, MelissaS. Caetano, Daniela Josa, GustavoP. Luz, ElisangelaA. Freitas & Elaine
F. F. da Cunha. (2011) Molecular Modeling of Mycobacterium Tuberculosis dUTpase: Docking and Catalytic Mechanism Studies. Journal of Biomolecular Structure and Dynamics 28:6, pages 907-917.
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Mao-Feng Sun, Tung-Ti Chang, Kai-Wei Chang, Hung-Jin Huang, Hsin-Yi Chen, Fuu-Jen Tsai, Jaung-Geng Lin & Calvin
Yu-Chia Chen. (2011) Blocking the DNA Repair System by Traditional Chinese Medicine?. Journal of Biomolecular Structure and Dynamics 28:6, pages 895-906.
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Yue Wang, Fuyong Bian, Shengrong Deng, Qiang Shi, Maofa Ge, Shu Wang, Xingkang Zhang & Sichuan Xu. (2011) The Key Residues of Active Sites on the Catalytic Fragment for Paclitaxel Interacting with Poly (ADP-Ribose) Polymerase. Journal of Biomolecular Structure and Dynamics 28:6, pages 881-893.
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Mei Zhuohang, Liu Ji & Yu Hongwei. (2011) Modeling of Transition State by Molecular Dynamics. Prediction of Catalytic Efficiency of the Mutants of Mandelate Racemase. Journal of Biomolecular Structure and Dynamics 28:6, pages 871-879.
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Jiapu Zhang & David
D.W. Liu. (2011) Molecular Dynamics Studies on the Structural Stability of Wild-type Dog Prion Protein. Journal of Biomolecular Structure and Dynamics 28:6, pages 861-869.
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Vinod Jani, UddhaveshB. Sonavane & Rajendra Joshi. (2011) Microsecond Scale Replica Exchange Molecular Dynamic Simulation of Villin Headpiece: An Insight into the Folding Landscape. Journal of Biomolecular Structure and Dynamics 28:6, pages 845-860.
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Yunjie Zhao, Zhou Gong & Yi Xiao. (2011) Improvements of the Hierarchical Approach for Predicting RNA Tertiary Structure. Journal of Biomolecular Structure and Dynamics 28:5, pages 815-826.
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YuDong Cai, JianFeng He & Lin Lu. (2011) Predicting Sumoylation Site by Feature Selection Method. Journal of Biomolecular Structure and Dynamics 28:5, pages 797-804.
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EvandroP. Semighini, JonathanA. Resende, Peterson de Andrade, Pedro
A. B. Morais, Ivone Carvalho, CarltonA. Taft & Carlos
H. T. P. Silva. (2011) Using Computer-aided Drug Design and Medicinal Chemistry Strategies in the Fight Against Diabetes. Journal of Biomolecular Structure and Dynamics 28:5, pages 787-796.
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Zheng-Li Zhou, Jian-Hua Zhao, Hsuan-Liang Liu, JosephineW. Wu, Kung-Tien Liu, Chih-Kuang Chuang, Wei-Bor Tsai & Yih Ho. (2011) The Possible Structural Models for Polyglutamine Aggregation: A Molecular Dynamics Simulations Study. Journal of Biomolecular Structure and Dynamics 28:5, pages 743-758.
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Sujata Roy & Ashoke
Ranjan Thakur. (2011) Two models of Smad4 and Hoxa9 Complex are Proposed: Structural and Interactional Perspective. Journal of Biomolecular Structure and Dynamics 28:5, pages 729-742.
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Xianjin Xu, Jiguo Su, Weizu Chen & Cunxin Wang. (2011) Thermal Stability and Unfolding Pathways of Sso7d and its Mutant F31A: Insight from Molecular Dynamics Simulation. Journal of Biomolecular Structure and Dynamics 28:5, pages 717-727.
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Elif
Ozkirimli Olmez & Burak Alakent. (2011) Alpha7 Helix Plays an Important Role in the Conformational Stability of PTP1B. Journal of Biomolecular Structure and Dynamics 28:5, pages 675-693.
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Bornali Chakrabarti, HridoyR. Bairagya, Payel Mallik, BishnuP. Mukhopadhyay & AsimK. Bera. (2011) An Insight to Conserved Water Molecular Dynamics of Catalytic and Structural Zn+2 ions in Matrix Metalloproteinase 13 of Human. Journal of Biomolecular Structure and Dynamics 28:4, pages 503-516.
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H. Vahedian-Movahed, M.R. Saberi & J. Chamani. (2011) Comparison of Binding Interactions of Lomefloxacin to Serum Albumin and Serum Transferrin by Resonance Light Scattering and Fluorescence Quenching Methods. Journal of Biomolecular Structure and Dynamics 28:4, pages 483-502.
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Chia-Hui Lin, Tung-Ti Chang, Mao-Feng Sun, Hsin-Yi Chen, Fuu-Jen Tsai, Kun-Lung Chang, Mark Fisher & Calvin
Yu-Chian Chen. (2011) Potent Inhibitor Design Against H1N1 Swine Influenza: Structure-based and Molecular Dynamics Analysis for M2 Inhibitors from Traditional Chinese Medicine Database. Journal of Biomolecular Structure and Dynamics 28:4, pages 471-482.
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AnaP. Guimarães, AlineA. Oliveira, Elaine
F. F. da Cunha, TeodoricoC. Ramalho & Tanos
C. C. França. (2011) Design of New Chemotherapeutics Against the Deadly Anthrax Disease. Docking and Molecular Dynamics studies of Inhibitors Containing Pyrrolidine and Riboamidrazone Rings on Nucleoside Hydrolase from Bacillus anthracis
. Journal of Biomolecular Structure and Dynamics 28:4, pages 455-469.
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Will
C. Guest, Steven
S. Plotkin & Neil
R. Cashman. (2011) Toward a Mechanism of Prion Misfolding and Structural Models of PrPSc: Current Knowledge and Future Directions. Journal of Toxicology and Environmental Health, Part A 74:2-4, pages 154-160.
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K. Bhargavi, P.
Kalyan Chaitanya, D. Ramasree, M. Vasavi, D.K. Murthy & V. Uma. (2010) Homology Modeling and Docking Studies of Human Bcl-2L10 Protein. Journal of Biomolecular Structure and Dynamics 28:3, pages 379-391.
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A. Mahalakshmi & R. Shenbagarathai. (2010) Homology Modeling of Cry10Aa Toxin from B. thuringiensis israelensis and B. thuringiensis subsp. LDC-9. Journal of Biomolecular Structure and Dynamics 28:3, pages 363-378.
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Linghao Zhong. (2010) Exposure of Hydrophobic Core in Human Prion Protein Pathogenic Mutant H187R. Journal of Biomolecular Structure and Dynamics 28:3, pages 355-361.
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Zanxia Cao, Lei Liu & Jihua Wang. (2010) Effects of pH and Temperature on the Structural and Thermodynamic Character of a-syn12 Peptide in Aqueous Solution. Journal of Biomolecular Structure and Dynamics 28:3, pages 343-353.
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Yu-Chian Chen. (2010) Key Features for Designing Phosphodiesterase-5 Inhibitors. Journal of Biomolecular Structure and Dynamics 28:3, pages 309-321.
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Yu-Chian Chen. (2010) A Novel Strategy for Designing the Selective PPAR Agonist by the “Sum of Activity” Model. Journal of Biomolecular Structure and Dynamics 28:2, pages 187-200.
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AlexeiN. Nekrasov & AlexeiA. Zinchenko. (2010) Structural Features of the Interfaces in Enzyme-Inhibitor Complexes. Journal of Biomolecular Structure and Dynamics 28:1, pages 85-96.
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Jiapu ZhangJiapu Zhang. 2015. Molecular Structures and Structural Dynamics of Prion Proteins and Prions. Molecular Structures and Structural Dynamics of Prion Proteins and Prions
39
60
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169
197
.