4,211
Views
122
CrossRef citations to date
0
Altmetric
RESEARCH PAPER

Distribution and frequencies of post-transcriptional modifications in tRNAs

, , &
Pages 1619-1629 | Received 17 Jul 2014, Accepted 15 Oct 2014, Published online: 26 Feb 2015

Keep up to date with the latest research on this topic with citation updates for this article.

Read on this site (4)

Olivier Finet, Carlo Yague-Sanz, Florian Marchand & Damien Hermand. (2022) The Dihydrouridine landscape from tRNA to mRNA: a perspective on synthesis, structural impact and function. RNA Biology 19:1, pages 735-750.
Read now
Jessica M. Warren, Thalia Salinas-Giegé, Guillaume Hummel, Nicole L. Coots, Joshua M. Svendsen, Kristen C. Brown, Laurence Drouard & Daniel B. Sloan. (2021) Combining tRNA sequencing methods to characterize plant tRNA expression and post-transcriptional modification. RNA Biology 18:1, pages 64-78.
Read now
Yasutoshi Akiyama, Prakash Kharel, Takaaki Abe, Paul Anderson & Pavel Ivanov. (2020) Isolation and initial structure-functional characterization of endogenous tRNA-derived stress-induced RNAs. RNA Biology 17:8, pages 1116-1124.
Read now
Joanne M. Ho, Erol Bakkalbasi, Dieter Söll & Corwin A. Miller. (2018) Drugging tRNA aminoacylation. RNA Biology 15:4-5, pages 667-677.
Read now

Articles from other publishers (118)

Marcel-Joseph Yared, Yasemin Yoluç, Marjorie Catala, Carine Tisné, Stefanie Kaiser & Pierre Barraud. (2023) Different modification pathways for m1A58 incorporation in yeast elongator and initiator tRNAs. Nucleic Acids Research 51:19, pages 10653-10667.
Crossref
Mengqi Jin, Zelin Zhang, Zhijiang Yu, Wei Chen, Xiaolei Wang, Dongsheng Lei & Wenhua Zhang. (2023) Structure–function analysis of an ancient TsaD–TsaC–SUA5–TcdA modular enzyme reveals a prototype of tRNA t6A and ct6A synthetases. Nucleic Acids Research 51:16, pages 8711-8729.
Crossref
Eric M. Phizicky & Anita K. Hopper. (2023) The life and times of a tRNA. RNA 29:7, pages 898-957.
Crossref
Adeline Pichard-Kostuch, Violette Da Cunha, Jacques Oberto, Ludovic Sauguet & Tamara Basta. (2023) The universal Sua5/TsaC family evolved different mechanisms for the synthesis of a key tRNA modification. Frontiers in Microbiology 14.
Crossref
Lisa Lirussi & Hilde Loge Nilsen. (2023) DNA Glycosylases Define the Outcome of Endogenous Base Modifications. International Journal of Molecular Sciences 24:12, pages 10307.
Crossref
Morghan C. Lucas, Leszek P. Pryszcz, Rebeca Medina, Ivan Milenkovic, Noelia Camacho, Virginie Marchand, Yuri Motorin, Lluís Ribas de Pouplana & Eva Maria Novoa. (2023) Quantitative analysis of tRNA abundance and modifications by nanopore RNA sequencing. Nature Biotechnology.
Crossref
Karolina Podskoczyj, Anna Klos, Szymon Drewniak & Grazyna Leszczynska. (2023) Two-step conversion of uridine and cytidine to variously C5-C functionalized analogs. Organic & Biomolecular Chemistry 21:13, pages 2809-2815.
Crossref
Marcin Jaciuk, David Scherf, Karol Kaszuba, Monika Gaik, Alexander Rau, Anna Kościelniak, Rościsław Krutyhołowa, Michał Rawski, Paulina Indyka, Andrea Graziadei, Andrzej Chramiec-Głąbik, Anna Biela, Dominika Dobosz, Ting-Yu Lin, Nour-el-Hana Abbassi, Alexander Hammermeister, Juri Rappsilber, Jan Kosinski, Raffael Schaffrath & Sebastian Glatt. (2023) Cryo-EM structure of the fully assembled Elongator complex. Nucleic Acids Research 51:5, pages 2011-2032.
Crossref
Olivia Boyer, Géraldine Mollet & Guillaume Dorval. (2023) Atteinte neurologique et syndrome néphrotique cortico-résistant. médecine/sciences 39:3, pages 246-252.
Crossref
Yue Wang, Xuan Wang, Xiaodong Cui, Jia Meng & Rong Rong. (2023) Self-attention enabled deep learning of dihydrouridine (D) modification on mRNAs unveiled a distinct sequence signature from tRNAs. Molecular Therapy - Nucleic Acids 31, pages 411-420.
Crossref
Gyuhyeok Cho, Jangmin Lee & Jungwook Kim. (2023) Identification of a novel 5-aminomethyl-2-thiouridine methyltransferase in tRNA modification. Nucleic Acids Research 51:4, pages 1971-1983.
Crossref
Marie-Claire Daugeron, Sophia Missoury, Violette Da Cunha, Noureddine Lazar, Bruno Collinet, Herman van Tilbeurgh & Tamara Basta. (2023) A paralog of Pcc1 is the fifth core subunit of the KEOPS tRNA-modifying complex in Archaea. Nature Communications 14:1.
Crossref
Fei Ren, Kai-Yue Cao, Rui-Ze Gong, Meng-Lan Yu, Peng Tao, Yi Xiao & Zhi-Hong Jiang. (2023) The role of post-transcriptional modification on a new tRNAIle(GAU) identified from Ganoderma lucidum in its fragments’ cytotoxicity on cancer cells. International Journal of Biological Macromolecules 229, pages 885-895.
Crossref
Wan Song, Ram Podicheti, Douglas B Rusch & William Daniel TraceyJrJr. (2022) Transcriptome-wide analysis of pseudouridylation in Drosophila melanogaster . G3 Genes|Genomes|Genetics.
Crossref
Ambika S. Dound, Prayagraj M. Fandilolu & Kailas D. Sonawane. (2022) Structural Significance of Conformational Preferences and Ribose-Ring-Puckering of Hyper Modified Nucleotide 5’-Monophosphate 2-Methylthio Cyclic N6-Threonylcarbamoyladenosine (p-ms2ct6A) Present at 37th Position in Anticodon Loop of tRNALys. Cell Biochemistry and Biophysics 80:4, pages 665-680.
Crossref
Yuanwei Zhang, Yamei Wang, Jialu Fan, Guoxing Zhu & Ling Lu. (2022) Aspergillus fumigatus Elongator complex subunit 3 affects hyphal growth, adhesion and virulence through wobble uridine tRNA modification. PLOS Pathogens 18:11, pages e1010976.
Crossref
Mohit Chawla, Kanav Kalra, Zhen Cao, Luigi Cavallo & Romina Oliva. (2022) Occurrence and stability of anion–π interactions between phosphate and nucleobases in functional RNA molecules. Nucleic Acids Research 50:20, pages 11455-11469.
Crossref
Viktoriia A. Arzumanian, Georgii V. Dolgalev, Ilya Y. Kurbatov, Olga I. Kiseleva & Ekaterina V. Poverennaya. (2022) Epitranscriptome: Review of Top 25 Most-Studied RNA Modifications. International Journal of Molecular Sciences 23:22, pages 13851.
Crossref
Lingling Hou, Cuifang Hu, Lili Ji, Qiongdan Wang & Min Liang. (2022) The Mitochondrial tRNAPhe 625G>A Mutation in Three Han Chinese Families With Cholecystolithiasis. Frontiers in Genetics 13.
Crossref
Katarzyna Frankowska & Elzbieta Sochacka. (2022) New Efficient Synthesis of tRNA Related Adenosines Bearing the Hydantoin Ring (ct 6 A, ms 2 ct 6 A) by Intramolecular Cyclization of N 6 ‐( N ‐Boc‐α‐aminoacyl)‐adenosine Derivatives . ChemBioChem 23:5.
Crossref
Abdul Khalique, Sandy Mattijssen & Richard J. Maraia. (2022) A versatile tRNA modification-sensitive northern blot method with enhanced performance. RNA 28:3, pages 418-432.
Crossref
Thomas Biedenbänder, Vanessa de Jesus, Martina Schmidt-Dengler, Mark Helm, Björn Corzilius & Boris Fürtig. (2022) RNA modifications stabilize the tertiary structure of tRNAfMet by locally increasing conformational dynamics. Nucleic Acids Research 50:4, pages 2334-2349.
Crossref
Udit Dalwadi, Dhiraj Mannar, Felix Zierhut & Calvin K. Yip. (2022) Biochemical and Structural Characterization of Human Core Elongator and Its Subassemblies. ACS Omega 7:4, pages 3424-3433.
Crossref
Olivier Finet, Carlo Yague-Sanz, Lara Katharina Krüger, Phong Tran, Valérie Migeot, Max Louski, Alicia Nevers, Mathieu Rougemaille, Jingjing Sun, Felix G.M. Ernst, Ludivine Wacheul, Maxime Wery, Antonin Morillon, Peter Dedon, Denis L.J. Lafontaine & Damien Hermand. (2022) Transcription-wide mapping of dihydrouridine reveals that mRNA dihydrouridylation is required for meiotic chromosome segregation. Molecular Cell 82:2, pages 404-419.e9.
Crossref
Marc Graille. (2021) Division of labor in epitranscriptomics: What have we learnt from the structures of eukaryotic and viral multimeric RNA methyltransferases? . WIREs RNA 13:1.
Crossref
Jieyi Ma, Hui Han, Ying Huang, Chunlong Yang, Siyi Zheng, Tiancai Cai, Jiong Bi, Xiaohui Huang, Ruiming Liu, Libin Huang, Yifeng Luo, Wen Li & Shuibin Lin. (2021) METTL1/WDR4-mediated m7G tRNA modifications and m7G codon usage promote mRNA translation and lung cancer progression. Molecular Therapy 29:12, pages 3422-3435.
Crossref
Jing-Bo Zhou, En-Duo Wang & Xiao-Long Zhou. (2021) Modifications of the human tRNA anticodon loop and their associations with genetic diseases. Cellular and Molecular Life Sciences 78:23, pages 7087-7105.
Crossref
Huimin Li, Lin Chen, Yunsong Han, Fangfang Zhang, Yanyan Wang, Yali Han, Yange Wang, Qiang Wang & Xiangqian Guo. (2021) The Identification of RNA Modification Gene PUS7 as a Potential Biomarker of Ovarian Cancer. Biology 10:11, pages 1130.
Crossref
Olivia Boyer, Géraldine Mollet & Guillaume Dorval. (2021) Neurological involvement in monogenic podocytopathies. Pediatric Nephrology 36:11, pages 3571-3583.
Crossref
Niki K. Thomas, Vinay C. Poodari, Miten Jain, Hugh E. Olsen, Mark Akeson & Robin L. Abu-Shumays. (2021) Direct Nanopore Sequencing of Individual Full Length tRNA Strands. ACS Nano 15:10, pages 16642-16653.
Crossref
Ziyue Qin, Wencan Wang, Malik Ahsan Ali, Yihan Wang, Yan Zhang, Ming Zhang, Guangbin Zhou, Jian-dong Yang & Changjun Zeng. (2021) Transcriptome-wide m6A profiling reveals mRNA post-transcriptional modification of boar sperm during cryopreservation. BMC Genomics 22:1.
Crossref
Jennifer F. Hu, Daniel Yim, Duanduan Ma, Sabrina M. Huber, Nick Davis, Jo Marie Bacusmo, Sidney Vermeulen, Jieliang Zhou, Thomas J. Begley, Michael S. DeMott, Stuart S. Levine, Valérie de Crécy-Lagard, Peter C. Dedon & Bo Cao. (2021) Quantitative mapping of the cellular small RNA landscape with AQRNA-seq. Nature Biotechnology 39:8, pages 978-988.
Crossref
Jahangir Alam, Farah Tazkera Rahman, Shiv K. Sah-Teli, Rajaram Venkatesan, M. Kristian Koski, Kaija J. Autio, J. Kalervo Hiltunen & Alexander J. Kastaniotis. (2021) Expression and analysis of the SAM-dependent RNA methyltransferase Rsm22 from Saccharomyces cerevisiae . Acta Crystallographica Section D Structural Biology 77:6, pages 840-853.
Crossref
Anne Hoffmann, Lieselotte Erber, Heike Betat, Peter F. Stadler, Mario Mörl & Jörg Fallmann. (2021) Changes of the tRNA Modification Pattern during the Development of Dictyostelium discoideum. Non-Coding RNA 7:2, pages 32.
Crossref
Marisa Pereira, Diana R. Ribeiro, Miguel M. Pinheiro, Margarida Ferreira, Stefanie Kellner & Ana R. Soares. (2021) m5U54 tRNA Hypomodification by Lack of TRMT2A Drives the Generation of tRNA-Derived Small RNAs. International Journal of Molecular Sciences 22:6, pages 2941.
Crossref
Preethi Seelam Prabhakar, Nathania A. Takyi & Stacey D. Wetmore. (2021) Posttranscriptional modifications at the 37th position in the anticodon stem–loop of tRNA: structural insights from MD simulations. RNA 27:2, pages 202-220.
Crossref
Tong-Meng Yan, Yu Pan, Meng-Lan Yu, Kua Hu, Kai-Yue Cao & Zhi-Hong Jiang. (2020) Full-Range Profiling of tRNA Modifications Using LC–MS/MS at Single-Base Resolution through a Site-Specific Cleavage Strategy. Analytical Chemistry 93:3, pages 1423-1432.
Crossref
Katarzyna Debiec & Elzbieta Sochacka. (2021) Efficient access to 3′- O -phosphoramidite derivatives of tRNA related N 6 -threonylcarbamoyladenosine (t6A) and 2-methylthio- N 6 -threonylcarbamoyladenosine (ms2t6A) . RSC Advances 11:4, pages 1992-1999.
Crossref
Sunil Shetty & Umesh Varshney. (2021) Regulation of translation by one-carbon metabolism in bacteria and eukaryotic organelles. Journal of Biological Chemistry 296, pages 100088.
Crossref
Ina Anreiter, Quoseena Mir, Jared T. Simpson, Sarath C. Janga & Matthias Soller. (2021) New Twists in Detecting mRNA Modification Dynamics. Trends in Biotechnology 39:1, pages 72-89.
Crossref
Ruimeng Yang, Xing Liang, Hui Wang, Miaomiao Guo, Hui Shen, Yongheng Shi, Qiang Liu, Yongwei Sun, Linhua Yang & Ming Zhan. (2021) The RNA methyltransferase NSUN6 suppresses pancreatic cancer development by regulating cell proliferation. EBioMedicine 63, pages 103195.
Crossref
Veronika Boczonadi, Juliane S. Müller & Rita Horvath. 2021. Mitochondrial Diseases. Mitochondrial Diseases 95 117 .
Alexandre Gato, Marjorie Catala, Carine Tisné & Pierre Barraud. 2021. RNA Modifications. RNA Modifications 307 323 .
Liying Meng, Yilan Guo, Qi Tang, Rongbing Huang, Yuchen Xie & Xing Chen. (2020) Metabolic RNA labeling for probing RNA dynamics in bacteria. Nucleic Acids Research 48:22, pages 12566-12576.
Crossref
Emre Cimen, Sarah E Jensen & Edward S Buckler. (2020) Building a tRNA thermometer to estimate microbial adaptation to temperature. Nucleic Acids Research 48:21, pages 12004-12015.
Crossref
Philippe Wolff, Claire Villette, Julie Zumsteg, Dimitri Heintz, Laura Antoine, Béatrice Chane-Woon-Ming, Louis Droogmans, Henri Grosjean & Eric Westhof. (2020) Comparative patterns of modified nucleotides in individual tRNA species from a mesophilic and two thermophilic archaea. RNA 26:12, pages 1957-1975.
Crossref
Can Wang, Nhan van Tran, Vincent Jactel, Vincent Guérineau & Marc Graille. (2020) Structural and functional insights into Archaeoglobus fulgidus m2G10 tRNA methyltransferase Trm11 and its Trm112 activator. Nucleic Acids Research 48:19, pages 11068-11082.
Crossref
Eric D Hoffer, Samuel Hong, S Sunita, Tatsuya Maehigashi, Ruben L GonzalezJnrJnr, Paul C Whitford & Christine M Dunham. (2020) Structural insights into mRNA reading frame regulation by tRNA modification and slippery codon–anticodon pairing. eLife 9.
Crossref
Karolina Bartosik, Katarzyna Debiec, Anna Czarnecka, Elzbieta Sochacka & Grazyna Leszczynska. (2020) Synthesis of Nucleobase-Modified RNA Oligonucleotides by Post-Synthetic Approach. Molecules 25:15, pages 3344.
Crossref
Hiroki Shima & Kazuhiko Igarashi. (2020) N 1-methyladenosine (m1A) RNA modification: the key to ribosome control. The Journal of Biochemistry 167:6, pages 535-539.
Crossref
Fu Xu, Anders S. Byström & Marcus J. O. Johansson. (2019) SSD1 modifies phenotypes of Elongator mutants. Current Genetics 66:3, pages 481-485.
Crossref
Abdul Khalique, Sandy Mattijssen, Alexander F. Haddad, Shereen Chaudhry & Richard J. Maraia. (2020) Targeting mitochondrial and cytosolic substrates of TRIT1 isopentenyltransferase: Specificity determinants and tRNA-i6A37 profiles. PLOS Genetics 16:4, pages e1008330.
Crossref
Britta Meyer, Carina Immer, Steffen Kaiser, Sunny Sharma, Jun Yang, Peter Watzinger, Lena Weiß, Annika Kotter, Mark Helm, Hans-Michael Seitz, Peter Kötter, Stefanie Kellner, Karl-Dieter Entian & Jens Wöhnert. (2020) Identification of the 3-amino-3-carboxypropyl (acp) transferase enzyme responsible for acp3U formation at position 47 in Escherichia coli tRNAs. Nucleic Acids Research 48:3, pages 1435-1450.
Crossref
Samuel Wein, Byron Andrews, Timo Sachsenberg, Helena Santos-Rosa, Oliver Kohlbacher, Tony Kouzarides, Benjamin A. Garcia & Hendrik Weisser. (2020) A computational platform for high-throughput analysis of RNA sequences and modifications by mass spectrometry. Nature Communications 11:1.
Crossref
Lauren Endres, Rebecca E. Rose, Frank Doyle, Taylor Rahn, Bethany Lee, Jessica Seaman, William D. McIntyre & Daniele Fabris. (2020) 2'-O-ribose methylation of transfer RNA promotes recovery from oxidative stress in Saccharomyces cerevisiae. PLOS ONE 15:2, pages e0229103.
Crossref
Sherif Rashad, Kuniyasu Niizuma & Teiji Tominaga. (2020) tRNA cleavage: a new insight. Neural Regeneration Research 15:1, pages 47.
Crossref
Laura Antoine & Philippe Wolff. 2020. RNA Spectroscopy. RNA Spectroscopy 101 110 .
Nathan W Howell & Jane E Jackman. 2005. Encyclopedia of Life Sciences. Encyclopedia of Life Sciences 1 11 .
Katarzyna Debiec, Michal Matuszewski, Karolina Podskoczyj, Grazyna Leszczynska & Elzbieta Sochacka. (2019) Chemical Synthesis of Oligoribonucleotide (ASL of tRNA Lys T. brucei ) Containing a Recently Discovered Cyclic Form of 2‐Methylthio‐ N 6 ‐threonylcarbamoyladenosine (ms 2 ct 6 A) . Chemistry – A European Journal 25:58, pages 13309-13317.
Crossref
Nathan W. Howell, Manasses Jora, Benjamin F. Jepson, Patrick A. Limbach & Jane E. Jackman. (2019) Distinct substrate specificities of the human tRNA methyltransferases TRMT10A and TRMT10B. RNA 25:10, pages 1366-1376.
Crossref
Sophie Sleiman & Francois Dragon. (2019) Recent Advances on the Structure and Function of RNA Acetyltransferase Kre33/NAT10. Cells 8:9, pages 1035.
Crossref
Ashleigh E. SchafferOtis PinkardJeffery M. Coller. (2019) tRNA Metabolism and Neurodevelopmental Disorders. Annual Review of Genomics and Human Genetics 20:1, pages 359-387.
Crossref
Fu Xu, Anders S. Byström & Marcus J. O. Johansson. (2019) SSD1 suppresses phenotypes induced by the lack of Elongator-dependent tRNA modifications. PLOS Genetics 15:8, pages e1008117.
Crossref
Emil M. Nilsson & Rebecca W. Alexander. (2019) Bacterial wobble modifications of NNA‐decoding tRNAs. IUBMB Life 71:8, pages 1158-1166.
Crossref
Pierre Barraud & Carine Tisné. (2019) To be or not to be modified: Miscellaneous aspects influencing nucleotide modifications in tRNAs. IUBMB Life 71:8, pages 1126-1140.
Crossref
Pierre Barraud, Alexandre Gato, Matthias Heiss, Marjorie Catala, Stefanie Kellner & Carine Tisné. (2019) Time-resolved NMR monitoring of tRNA maturation. Nature Communications 10:1.
Crossref
Parmanand Malvi, Biao Wang, Shreni Shah & Romi Gupta. (2019) Dissecting the role of RNA modification regulatory proteins in melanoma. Oncotarget 10:38, pages 3745-3759.
Crossref
Svenja Grobe, Sebastian Doberenz, Kevin Ferreira, Jonas Krueger, Mark Brönstrup, Volkhard Kaever & Susanne Häussler. (2019) Identification and Quantification of (t)RNA Modifications in Pseudomonas aeruginosa by Liquid Chromatography–Tandem Mass Spectrometry . ChemBioChem 20:11, pages 1430-1437.
Crossref
Adrian Gabriel Torres, Oscar ReinaCamille Stephan-Otto Attolini & Lluís Ribas de Pouplana. (2019) Differential expression of human tRNA genes drives the abundance of tRNA-derived fragments. Proceedings of the National Academy of Sciences 116:17, pages 8451-8456.
Crossref
Àlbert Rafels-Ybern, Adrian Gabriel Torres, Noelia Camacho, Andrea Herencia-Ropero, Helena Roura Frigolé, Thomas F Wulff, Marina Raboteg, Albert Bordons, Xavier Grau-Bove, Iñaki Ruiz-Trillo & Lluís Ribas de Pouplana. (2019) The Expansion of Inosine at the Wobble Position of tRNAs, and Its Role in the Evolution of Proteomes. Molecular Biology and Evolution 36:4, pages 650-662.
Crossref
Ha An Nguyen, Eric D. Hoffer & Christine M. Dunham. (2019) Importance of a tRNA anticodon loop modification and a conserved, noncanonical anticodon stem pairing in tRNACGGPro for decoding. Journal of Biological Chemistry 294:14, pages 5281-5291.
Crossref
Navanath M. Kumbhar & Janhavi S. Gopal. (2019) Structural significance of hypermodified nucleoside 5-carboxymethylaminomethyluridine (cmnm5U) from ‘wobble’ (34th) position of mitochondrial tRNAs: Molecular modeling and Markov state model studies. Journal of Molecular Graphics and Modelling 86, pages 66-83.
Crossref
Vicente RamírezBeatriz GonzálezAna LópezMaria Jose CastellóMaria José GilBo Zheng, Peng Chen & Pablo Vera. (2018) A 2′- O -Methyltransferase Responsible for Transfer RNA Anticodon Modification Is Pivotal for Resistance to Pseudomonas syringae DC3000 in Arabidopsis . Molecular Plant-Microbe Interactions® 31:12, pages 1323-1336.
Crossref
Kyle Hoffman, Ana Crnković & Dieter Söll. (2018) Versatility of Synthetic tRNAs in Genetic Code Expansion. Genes 9:11, pages 537.
Crossref
Adrian G. Torres, Thomas F. Wulff, Marta Rodríguez-Escribà, Noelia Camacho & Lluís Ribas de Pouplana. (2018) Detection of Inosine on Transfer RNAs without a Reverse Transcription Reaction. Biochemistry 57:39, pages 5641-5647.
Crossref
Lu Han & Eric M. Phizicky. (2018) A rationale for tRNA modification circuits in the anticodon loop. RNA 24:10, pages 1277-1284.
Crossref
Anne Hoffmann, Jörg Fallmann, Elisa Vilardo, Mario Mörl, Peter F Stadler & Fabian Amman. (2018) Accurate mapping of tRNA reads. Bioinformatics 34:7, pages 1116-1124.
Crossref
Marcus J.O. Johansson, Fu Xu & Anders S. Byström. (2018) Elongator—a tRNA modifying complex that promotes efficient translational decoding. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1861:4, pages 401-408.
Crossref
Ting Liu, Cheng-Jie Ma, Bi-Feng Yuan & Yu-Qi Feng. (2018) Modificaomics: deciphering the functions of biomolecule modifications. Science China Chemistry 61:4, pages 381-392.
Crossref
Lukas Trixl, Thomas Amort, Alexandra Wille, Manuela Zinni, Susanne Ebner, Clara Hechenberger, Felix Eichin, Hanna Gabriel, Ines Schoberleitner, Anming Huang, Paolo Piatti, Roxana Nat, Jakob Troppmair & Alexandra Lusser. (2017) RNA cytosine methyltransferase Nsun3 regulates embryonic stem cell differentiation by promoting mitochondrial activity. Cellular and Molecular Life Sciences 75:8, pages 1483-1497.
Crossref
Thomas Amort, Dietmar Rieder, Alexandra Wille, Daria Khokhlova-Cubberley, Christian Riml, Lukas Trixl, Xi-Yu Jia, Ronald Micura & Alexandra Lusser. (2017) Distinct 5-methylcytosine profiles in poly(A) RNA from mouse embryonic stem cells and brain. Genome Biology 18:1.
Crossref
Noah M. Reynolds, Oscar Vargas-Rodriguez, Dieter Söll & Ana Crnković. (2017) The central role of tRNA in genetic code expansion. Biochimica et Biophysica Acta (BBA) - General Subjects 1861:11, pages 3001-3008.
Crossref
Christian Riml, Thomas Amort, Dietmar Rieder, Catherina Gasser, Alexandra Lusser & Ronald Micura. (2017) Osmium-Mediated Transformation of 4-Thiouridine to Cytidine as Key To Study RNA Dynamics by Sequencing. Angewandte Chemie International Edition 56:43, pages 13479-13483.
Crossref
Christian Riml, Thomas Amort, Dietmar Rieder, Catherina Gasser, Alexandra Lusser & Ronald Micura. (2017) Osmium‐Mediated Transformation of 4‐Thiouridine to Cytidine as Key To Study RNA Dynamics by Sequencing. Angewandte Chemie 129:43, pages 13664-13668.
Crossref
Mónica Marín, Tamara Fernández-Calero & Ricardo Ehrlich. (2017) Protein folding and tRNA biology. Biophysical Reviews 9:5, pages 573-588.
Crossref
Aiswarya Krishnamohan & Jane E. Jackman. (2017) Mechanistic features of the atypical tRNA m1G9 SPOUT methyltransferase, Trm10. Nucleic Acids Research 45:15, pages 9019-9029.
Crossref
Preethi P. Seelam, Purshotam Sharma & Abhijit Mitra. (2017) Structural landscape of base pairs containing post-transcriptional modifications in RNA. RNA 23:6, pages 847-859.
Crossref
Mariavittoria Pizzinga, Robert F Harvey & Anne E Willis. (2017) Till stress do us ataRT: a novel toxin–antitoxin system targeting translation initiation. Cell Death & Differentiation 24:6, pages 951-952.
Crossref
Kristina Nilsson, Gunilla Jäger & Glenn R. Björk. (2017) An unmodified wobble uridine in tRNAs specific for Glutamine, Lysine, and Glutamic acid from Salmonella enterica Serovar Typhimurium results in nonviability—Due to increased missense errors?. PLOS ONE 12:4, pages e0175092.
Crossref
Christian Lorenz, Christina Lünse & Mario Mörl. (2017) tRNA Modifications: Impact on Structure and Thermal Adaptation. Biomolecules 7:4, pages 35.
Crossref
Ville Väre, Emily Eruysal, Amithi Narendran, Kathryn Sarachan & Paul Agris. (2017) Chemical and Conformational Diversity of Modified Nucleosides Affects tRNA Structure and Function. Biomolecules 7:4, pages 29.
Crossref
Richard Maraia & Aneeshkumar Arimbasseri. (2017) Factors That Shape Eukaryotic tRNAomes:  Processing, Modification and Anticodon–Codon Use. Biomolecules 7:4, pages 26.
Crossref
Diego Rojas‐Benítez, Cristián Eggers & Alvaro Glavic. (2017) Modulation of the Proteostasis Machinery to  Overcome Stress Caused by Diminished Levels of  t6A‐Modified tRNAs in Drosophila. Biomolecules 7:4, pages 25.
Crossref
Robert Knüppel, Corinna Kuttenberger & Sébastien Ferreira-Cerca. (2017) Toward Time-Resolved Analysis of RNA Metabolism in Archaea Using 4-Thiouracil. Frontiers in Microbiology 8.
Crossref
Stephanie Oerum, Clément Dégut, Pierre Barraud & Carine Tisné. (2017) m1A Post‐Transcriptional Modification in tRNAs. Biomolecules 7:4, pages 20.
Crossref
Antoine Danchin. (2017) Coping with inevitable accidents in metabolism. Microbial Biotechnology 10:1, pages 57-72.
Crossref
Nicolai Krogh, Martin Kongsbak-Wismann, Carsten Geisler & Henrik Nielsen. (2017) Substoichiometric ribose methylations in spliceosomal snRNAs. Organic & Biomolecular Chemistry 15:42, pages 8872-8876.
Crossref
Grazyna Leszczynska, Klaudia Sadowska, Malgorzata Sierant, Milena Sobczak, Barbara Nawrot & Elzbieta Sochacka. (2017) Reaction of S-geranyl-2-thiouracil modified oligonucleotides with alkyl amines leads to the N2-alkyl isocytosine derivatives. Organic & Biomolecular Chemistry 15:25, pages 5332-5336.
Crossref
Karolina Bartosik, Elzbieta Sochacka & Grazyna Leszczynska. (2017) Post-synthetic conversion of 5-pivaloyloxymethyluridine present in a support-bound RNA oligomer into biologically relevant derivatives of 5-methyluridine. Organic & Biomolecular Chemistry 15:9, pages 2097-2103.
Crossref
Paul F. Agris, Amithi Narendran, Kathryn Sarachan, Ville Y.P. Väre & Emily Eruysal. 2017. RNA Modification. RNA Modification 1 50 .
Adeline Pichard-Kostuch, Marie-Claire Daugeron, Patrick Forterre & Tamara Basta. 2017. RNA Metabolism and Gene Expression in Archaea. RNA Metabolism and Gene Expression in Archaea 177 200 .
Francesca Tuorto & Frank Lyko. (2016) Genome recoding by tRNA modifications. Open Biology 6:12, pages 160287.
Crossref
Djemel Hamdane, Henri Grosjean & Marc Fontecave. (2016) Flavin-Dependent Methylation of RNAs: Complex Chemistry for a Simple Modification. Journal of Molecular Biology 428:24, pages 4867-4881.
Crossref
Henri Grosjean & Eric Westhof. (2016) An integrated, structure- and energy-based view of the genetic code. Nucleic Acids Research 44:17, pages 8020-8040.
Crossref
Magdalena A. Machnicka, Stanislaw Dunin-Horkawicz, Valérie de Crécy-Lagard & Janusz M. Bujnicki. (2016) tRNAmodpred: A computational method for predicting posttranscriptional modifications in tRNAs. Methods 107, pages 34-41.
Crossref
Marina Bartsakoulia, Juliane S. Mϋller, Aurora Gomez-Duran, Patrick Yu-Wai-Man, Veronika Boczonadi & Rita Horvath. (2016) Cysteine Supplementation May be Beneficial in a Subgroup of Mitochondrial Translation Deficiencies. Journal of Neuromuscular Diseases 3:3, pages 363-379.
Crossref
Markus Duechler, Grażyna Leszczyńska, Elzbieta Sochacka & Barbara Nawrot. (2016) Nucleoside modifications in the regulation of gene expression: focus on tRNA. Cellular and Molecular Life Sciences 73:16, pages 3075-3095.
Crossref
Peter T. S. van der Gulik & Wouter D. Hoff. (2016) Anticodon Modifications in the tRNA Set of LUCA and the Fundamental Regularity in the Standard Genetic Code. PLOS ONE 11:7, pages e0158342.
Crossref
Grazyna Leszczynska, Klaudia Sadowska, Paulina Bartos, Barbara Nawrot & Elzbieta Sochacka. (2016) S ‐Geranylated 2‐Thiouridines of Bacterial tRNAs: Chemical Synthesis and Physicochemical Properties . European Journal of Organic Chemistry 2016:21, pages 3482-3485.
Crossref
Adélaïde Saint-LégerCarla Bello, Pablo D. Dans, Adrian Gabriel TorresEva Maria Novoa, Noelia CamachoModesto Orozco, Fyodor A. KondrashovLluís Ribas de Pouplana. (2016) Saturation of recognition elements blocks evolution of new tRNA identities. Science Advances 2:4.
Crossref
Katherine McKenney & Juan Alfonzo. (2016) From Prebiotics to Probiotics: The Evolution and Functions of tRNA Modifications. Life 6:1, pages 13.
Crossref
Clément Dégut, Luc Ponchon, Marcia Folly-Klan, Pierre Barraud & Carine Tisné. (2016) The m1A58 modification in eubacterial tRNA: An overview of tRNA recognition and mechanism of catalysis by TrmI. Biophysical Chemistry 210, pages 27-34.
Crossref
Tamara Fernández-Calero, Florencia Cabrera-Cabrera, Ricardo Ehrlich & Mónica Marín. (2016) Silent Polymorphisms: Can the tRNA Population Explain Changes in Protein Properties?. Life 6:1, pages 9.
Crossref
Mirosława Z. Barciszewska, Patrick M. Perrigue & Jan Barciszewski. (2016) tRNA – the golden standard in molecular biology. Molecular BioSystems 12:1, pages 12-17.
Crossref
Aldo E. García-Guerrero, Angélica Zamudio-Ochoa, Yolanda Camacho-Villasana, Rodolfo García-Villegas, Adrián Reyes-Prieto & Xochitl Pérez-Martínez. 2016. Evolution of the Protein Synthesis Machinery and Its Regulation. Evolution of the Protein Synthesis Machinery and Its Regulation 109 142 .
Shawn M. Lyons, Marta M. Fay & Pavel Ivanov. 2016. Modified Nucleic Acids in Biology and Medicine. Modified Nucleic Acids in Biology and Medicine 27 54 .
Sunny Sharma & Denis L.J. Lafontaine. (2015) ‘View From A Bridge’: A New Perspective on Eukaryotic rRNA Base Modification. Trends in Biochemical Sciences 40:10, pages 560-575.
Crossref
Rita Horvath & Patrick F. Chinnery. (2015) Modifying Mitochondrial tRNAs: Delivering What the Cell Needs. Cell Metabolism 21:3, pages 351-352.
Crossref

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.