Applying modularity analysis of PPI networks to sequenced organisms

Figures & data

Figure 1. A flowchart of the protocol.

Table 1. Predicted data of O157 protein interactions

	Proteins predicted	Total protein of O157	Percentage	Interactions	Average PPIs per protein
Raw data	1,701	5,341	31.8%	24,995	14.7
Processed data	1,652	5,341	30.9%	12,130	7.3

Figure 2. Relations among predicted modules. Red node in the network represents a module. Node radius is proportional to the module’s size. Node labels represent module number. Edges represent at least two PPIs among modules. Modules in dashed rectangle have same GO biological process term with each other.