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REVIEW

The Novel Compounds with Biological Activity Derived from Soil Fungi in the Past Decade

, , ORCID Icon &
Pages 3493-3555 | Published online: 05 Dec 2023

Abstract

The secondary metabolites isolated from soil fungi have received more and more attention, especially new compounds that exhibited good biological activities. In this review, a total of 546 new compounds are included in the relevant literature since 2011. The new compounds are isolated from soil fungi, We divided these compounds into seven categories, including alkaloids, terpenoids, steroids, ketones, phenylpropanoids, quinones, esters, lactones, etc. In addition, the biological activities and structure–activity relationships of these compounds have also been fully discussed. The activities of these compounds are roughly divided into eight categories, including anticancer activity, antimicrobial activity, anti-inflammatory activity, antioxidant activity, antiviral activity, antimalarial activity, immunosuppressive activity and other activities. Since natural products are an important source of new drugs, this review may have a positive guiding effect on drug screening.

Introduction

During the period of 1981 to 2019, almost 60% of the clinically approved drugs were derived directly or indirectly from natural products.Citation1 Nature can breed many species, including prokaryotes and eukaryotes. Among them, fungi play an important role in the ecosystems of plants, animals and humans.Citation2 Soil is an excellent natural habitat for microorganisms and has a large number of microorganisms.Citation3 Soil represents a very heterogeneous environment for its microbiota. Among the soil inhabitants, bacteria and fungi are important organisms as they are involved in key biogeochemical cycling processes.Citation4 Terrestrial microorganisms have long been regarded as profile producers of specialised metabolites with unique structures or new modes of action, and particularly in recent years, the discovery of new active natural products from soil-derived microorganisms has increased rapidly, contributing significantly to drug development.Citation5 Since Alexander Fleming discovered penicillin in 1928, fungi have become a considerable resource for novel compounds and new drugs.Citation6 The secondary metabolites of fungi are a rich source of small molecule compound libraries, and some metabolites have significant biological activities,Citation7 such as the antibacterial agent penicillins, immunosuppressive drug cyclosporin A, antifungal drug echinocandin B, and cholesterol-lowering agent lovastatin.Citation8 Fungi are an ideal source for obtaining novel skeletons through large-scale culture: compared with plants, fungi can proliferate rapidly from small amounts of spores to a mass of branching hyphaes, which are more environmentally friendly than collecting plant materials; compared with bacteria, fungi can be cultured in a solid medium for a longer time.Citation9 Therefore, soil-derived fungi are receiving continuous attention as the source of biologically active secondary metabolites. Since 2011, a large number of new compounds have been obtained from soil-derived fungi, but few people have summarized and analyzed these compounds. This review summarizes the compounds derived from soil fungi from 2011 to 2022, and classifies their structures and activities. Importantly, we made statistical analysis of these new compounds, readers can clearly understand which genus of soil fungi has great potential to produce new compounds. In addition, through the analysis of activity data, readers can clearly understand which kind of structural compounds account for the majority of compounds with certain activities, which kind of structural compounds account for the majority of compounds with certain activity. By summarizing the structure and activity of the new compound, a total of 546 compounds were isolated from the metabolites of soil fungi during the decade of 2011–2022, mainly including alkaloids, terpenes, steroids, ketones, phenylpropanoids, quinones, esters and lactones, of which ketones (31.9%), terpenoids and steroids (22.2%) are the main structural types. Among the 546 compounds, 279 compounds (approximately 51%) have good biological activities, including anticancer, antimicrobial, anti-inflammatory, antioxidant, antiviral, antimalaria, and immunosuppressive activities. Among them, anticancer and antimicrobial activities accounted for the highest proportion ().

Figure 1 The percentage of various compounds.

Figure 1 The percentage of various compounds.

In the author’s personal view, this review can provide a positive guidance for the screening of new drugs. This is also the significance of writing this review. In addition, we also analyzed the habitat sources of these soil fungi, which provides some directions for researchers who want to obtain new compounds from soil fungi from special habitats.

Structure Types of New Compounds Derived from Soil Fungi

Alkaloids

Indole alkaloids

A quinazolinone-containing indole derivative, named pseudofischerine 1 (), was isolated from the fungus Neosartorya pseudofischeri S.W. Peterson.Citation10 Two new compounds, named peneciraistins E 2 and F 3 (), were isolated from saline soil-derived fungus Penicillium raistrickii. Compounds 2 and 3 are the first naturally occurring 3-indoleformic acid derivatives.Citation11 A new indole alkaloid named exopisiod 4 () was obtained from the fermentation products of Exophiala pisciphila PHF-9.Citation12 Waikialoid A 5 () was isolated from Aspergillus sp.Citation13 Effusin A 6 and dihydrocryptoechinulin D 7 (), two new spiropolyketide-diketopiperazines were isolated from the fungus Aspergillus effuses H1-1. Effusin A 6 possessed an unprecedented 3′,3a′,5′,6′-tetrahydrospiro[piperazine-2,2′-pyrano[2,3,4-de]chromene] skeleton.Citation14 One new prenylated indole diketopiperazine alkaloid, named dihydroneochinulin B 8 (), was isolated from the mangrove rhizosphere soil-derived fungus, Aspergillus effuses H1-1.Citation15 A new aszonalenin analogue 9c () was isolated from the culture of the soil fungus Neosartorya fischeri (KUFC 6344).Citation16 Six new indole-diterpenoids 1015 ( and ) were isolated from the fermentation broth of an aciduric fungal strain Penicillium camemberti OUCMDZ-1492 grown at pH 5.0.Citation17 Asperdiazapinones A-F 1621 () were isolated from the mycelial extract of the soil fungus Aspergillus sp. PSU-RSPG185.Citation18 Mangrovamides A-C 2224 (), featured a bicyclo [2.2.2] diazaoctane core and possessed a novel γ-methyl proline and isoprene derived dimethyl γ-pyrone functionalities hitherto unknown among the family of paraherquamides, were isolated from the fungus Penicillium sp. SYFz-1.Citation19 Rubrumazines A-C 2527 () were isolated and identified from a culture extract of Eurotium rubrum MA-150, a fungus obtained from mangrove-derived rhizospheric soil collected from the Andaman Sea coastline, Thailand.Citation20 Three new indolyl diketopiperazine derivatives, penillines A 28 and B 30 (), isopenilline A 29 (), were isolated from the Antarctic soil-derived fungus Penicillium sp. SCSIO 05705.Citation21 Cultivation and fractionation of secondary metabolites from Aspergillus kumbius revealed a unique chemotype comprising three new bis-indolyl benzenoids, kumbicins A-C 3133 ( and ).Citation22 Two new bisindolylbenzenoid alkaloids asterriquinols E 34 and F 35 () were isolated from the fermentation products of the fungus Aspergillus sp. CBS-P-2.Citation23 Cyclopiamines C 36 and D 37 () were obtained from Penicillium sp. CML 3020, a fungus sourced from an Atlantic Forest soil sample.Citation24 Tolypocladins A-J 3847 ( and ) have been isolated from a culture of a mine-soil-derived fungus, Tolypocladium sp. XL115.Citation25 Two novel cytochalasan alkaloids, chaetomadrasins A 48 and B 49 (), were isolated from the solid-state fermented culture of desert soil-derived Chaetomium madrasense 375.Citation26 Paraherquamide J 50 () was isolated from the fermentation product of the fungus Penicillium janthinellum HK1-6.Citation27 Two new compounds tryptoquivalines W 51 and X 52 () were isolated from a Hawaiian soil fungal strain Aspergillus terreus FS107.Citation28 Three new cytochalasins Z24, Z25, Z26 (5355, resp.) () were isolated from the fungus Eutypella sp. D-1 which was isolated from the soil of high latitude of the Arctic.Citation29 Purification of an extract from the broth of the soil fungus Aspergillus sp. PSU-RSPG185 resulted in the isolation of one new cytochalasin, aspergilluchalasin 56 ().Citation30 Two new alkaloids, iizukines C 57 and D 58 (), were isolated from the culture of Aspergillus iizukae.Citation31 Chemical screening of culture medium from the soil fungus Stachybotrys sp. resulted in the isolation of the three new phenylspirodrimanes MBJ-0030 59 (), MBJ-0031 60 and MBJ-0032 61 ().Citation32 Pycnidiophorones A-D 6265 () were isolated from cultures of the wetland-soil-derived fungus Pycnidiophora dispersa.Citation33 Clonorosins A 66 and B 67 (), two novel indole alkaloids featuring unprecedented 6/5/6/6/5 and 6/5/5 cores, were isolated from the soil-derived fungus Clonostachys rosea YRS-06.Citation34

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Figure 2 Alkaloids 1–92. (A) Alkaloids 1–14. (B) Alkaloids 15–31. (C) Alkaloids 32–46. (D) Alkaloids 47–61. (E) Alkaloids 62–79. (F) Alkaloids 80–92.

Figure 2 Alkaloids 1–92. (A) Alkaloids 1–14. (B) Alkaloids 15–31. (C) Alkaloids 32–46. (D) Alkaloids 47–61. (E) Alkaloids 62–79. (F) Alkaloids 80–92.

Other Alkaloids

Gymnastatins T-Y 6873 () and dankastatin D 74 (), were isolated from the soil fungus Gymnascella dankaliensis through fermentation on solid rice medium following addition of NaBr.Citation35 Two new threonine-containing metabolites, N-[4-hydroxy-3-prenyl-benzoyl]-L-threonine 75 () and N-[2,2-dimethyl-2H-chromene- 6-carbonyl]-L-threonine 76 (), were isolated from the fermentation broth of the soil fungus Curvularia inaequalis strain HS-FG-257.Citation36 A new isoquinolinone alkaloid, (5S)-3,4,5,7-tetramethyl-5,8-dihydroxyl-6(5H)- isoquinolinone 77 () was isolated from Penicillium sp. H9318.Citation37 Compound 78 (), named 3,8-Diacetyl-4-(3-methoxy-4,5-methylenedioxy)benzyl-7-phenyl-6-oxa-3,8-diazabicyclo[3.2.1]octane, was isolated from the fungus Neosartorya pseudofischeri S.W. Peterson.Citation10 In search for antibiotics from soil and endophytic fungi, the secondary metabolites of Fusarium avenaceum SF-1502. An alkaloid, fusaravenin 79 (), representing a new naphthoisoxazole formic acid connected with a morpholino carbon frame, the first example of a natural naphthoisoxazole type zwitter-ionic alkaloid, was characterized.Citation38 (–) Benzomalvins E 80 () was isolated from solid cultures of a interrhizospheric fungus Penicillium sp. SYPF 8411.Citation39 A new tryptoquivaline analog, tryptoquivaline V 81 () and a new brasiliamide analog, brasiliamide G 82 (), were isolated from the fungus Neosartorya pseudofischeri.Citation40 A new compound, talarodone A 83 () in co-culture of Talaromyces pinophilus and Paraphaeosphaeria sp. isolated from soil collected in Miyazaki Prefecture, Japan.Citation41 One new pyrrolidine derivative, asperidine A 84 (), and two new piperidine derivatives, asperidines B 85 and C 86 (), were isolated from the soil-derived fungus Aspergillus sclerotiorum PSU-RSPG178. Compound 86 possessed an unprecedented 7-oxa-1-azabicyclo[3.2.1]octane skeleton with four chiral centers.Citation42 A new alkaloid, named iizukine E 87 () was isolated from the culture of Aspergillus iizukae.Citation31 In order to investigate bioactive metabolites from aciduric fungi, Aspergillus sp. OUCMDZ-1914 was isolated from the mangrove soil in Wenchang Hainan, China. The strain was fermented under low pH and the products were extracted and the extract was purified by column chromatography over silica gel, Sephadex LH-20 and semi-preparative HPLC. The structures were identified by means of NMR, MS, UV, IR and X-ray single crystal diffraction. As a result, a new compound, methyl (2Z,3E,5E,7E,9E)-4,10-dimethyl-11-(2,5-dioxopyrrolidin-3-yl)-2-(2-hydroxyethylidene)-11-oxoundeca-3,5,7,9-tetraenoate 88 () was obtained.Citation43 A new γ-lactam, virgaricin B 89 (), was isolated from a fermentation broth of the fungus Virgaria boninensis FKI-4958.Citation44 From this active Paecilomyces lilacinus extract, a novel pyridone alkaloid, named Paecilomide 90 (), was isolated and its structure was elucidated by modern nuclear magnetic resonance techniques and mass spectrometric analyses.Citation45 The soil-derived fungus Clonostachys rosea. Fermentation of the fungus on white beans instead of rice afforded a new γ-lactam 91 (), named Clonostalactam.Citation46 A new nitrogen-containing compound, trichothioneic acid 92 (), was discovered from the metabolites of fungal strain Trichoderma virens FKI-7573.Citation47

Terpenoids and Steroids

Terpenoids

Sesquiterpene

Two new drimane sesquiterpenoids, fudecadiones A 93 and B 94 (), were isolated from the soil fungus Penicillium sp. BCC 17468.Citation48 Two new trichothecenes, named 8α-hydroxyroridin H 95 and myrothecin A 96 (), were isolated from the fermentation broth of a halotolerant fungus Myrothecium sp. GS-17, which was separated from the soil sample of a salina. Among them, compound 96 represents a class of rare trichothecenes with the linkage from C-13 to C-10, missing the epoxide group normally observed at C-12, C-13.Citation49 Penicibilaenes A 97 and B 98 () were characterized from Penicillium bilaiae MA-267, a fungus obtained from the rhizospheric soil of the mangrove plant Lumnitzera racemosa.Citation50 Two eremophilane sesquiterpenes, penicilleremophilanes A 99 and B 100 () were isolated from the soil fungus Penicillium copticola PSURSPG138.Citation51 A new sesquiterpenoid derivative, named aspergiketone 101 (), was isolated from the coastal saline soil fungus Aspergillus fumigatus.Citation52 Ochraceopones A-E 102106 () were isolated from an Antarctic soil-derived fungus, Aspergillus ochraceopetaliformis SCSIO 05702. Ochraceopones A-D 102105 are the first examples of α-pyrone merosesquiterpenoids possessing a linear tetracyclic carbon skeleton.Citation53 Four new 12.8-Eudesmanolides 107110 () were isolated from a mangrove rhizosphere-derived fungus Eutypella sp. 1–15.Citation54 A new acorane sesquiterpene, 3β-hydroxy-β-acorenol 111 (), has been discovered from the green Chinese onion-derived fungus F.proliferatum AF-04. and a sesquiterpenoid 112 (), cyclonerotriol B, was isolated from the extracts of the soil fungus F. avenaceum SF-1502.Citation38 Three new sesquiterpenes Trichodermapenes A-C 113115 () were isolated from the soil-derived fungus Trichoderma reesei PSU-SPSF013.Citation55 Chemical investigation of the Dictyosporium digitatum fungus resulted in the identification of three undescribed compounds 116118 (). which were named Dictyosporin A 116, Dictyosporin B 117, Dictyosporin C 118 respectively.Citation56 Two new sesquiterpenes, trichocitrinovirenes A 119 and B 120 (), were isolated from the soil-derived fungus Trichoderma citrinoviride PSU-SPSF346.Citation57 Five new sesquiterpenoids (121125) (), one new ophiobolin sesterterpenoid (126) (), and one new 3.5-dimethylorsellinic acid (DMOA)-based meroterpenoid (127) (), were isolated and characterized from fungus Aspergillus calidoustus, which was separated from the wetland soil collected at Dianchi Lake, Yunnan Province.Citation58

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Figure 3 Terpenoids and steroids 93–213. (A) Terpenoids 93–120. (B) Terpenoids 121–136. (C) Terpenoids 137–155. (D) Terpenoids 156–179. (E) Terpenoids 180–200. (F) Terpenoids and steroids 201–213.

Figure 3 Terpenoids and steroids 93–213. (A) Terpenoids 93–120. (B) Terpenoids 121–136. (C) Terpenoids 137–155. (D) Terpenoids 156–179. (E) Terpenoids 180–200. (F) Terpenoids and steroids 201–213.

Diterpene

A new meroditerpene sartorypyrone A 128 () was isolated from the culture of the soil fungus Neosartorya fischeri (KUFC 6344). Interestingly, sartorypyrone A 128, which possesses a monocyclic diterpene core.Citation16 Libertellenones G 129 and H 130 () were isolated from the fungus Eutypella sp. D-1 isolated from the soil of high latitude of Arctic.Citation59 Compounds 131 and 132 () were isolated from the fermentation broth and the mycelia of the soil fungus Penicillium sp. CM-7.Citation60 Libertellenones O-S 133137 ( and ), eutypellenones A 138 and B 139, libertellenones M 140 and N 141 (), were isolated from the culture of Eutypella sp. D-1 obtained from high-latitude soil of the Arctic. Structurally, compounds 133137 possess a cyclopropyl-fused pimarane diterpene moiety, whereas compounds 138 and 139 share an unusual cyclobutyl-fused pimarane diterpene skeleton.Citation61,Citation62 Five new diterpenoid glycosides, dongtingnoids A-E 142146 (), two new diterpenoid aglycones, dongtingnoids F 147 and G 148 (), were isolated from the fungus Penicillium sp. DT10, which was derived from wetland soil from Dongting Lake.Citation63 Tolypocladins K 149 and L 150 (), were isolated from the solid fermentation culture of a mine soil-derived fungus Tolypocladium sp. XL115.Citation64

Other Terpenoids

One new monoterpene named Trichodermanene 151 () was isolated from the soil-derived fungus Trichoderma reesei PSU-SPSF013.Citation55 Three new meroterpenoid derivatives, 4.25-dehydrominiolutelide B 152 (), ,25-dehydro-22- deoxyminiolutelide B 153 and isominiolutelide A 154 (), were isolated from the shaken culture of the fungus Penicillium sp. MA-37.Citation65 Purpurogenolides A-E 155159 ( and ), were isolated from the solid substrate fermentation cultures of the fungus Penicillium purpurogenum MHz 111.Citation66 A search for cytotoxic agents from cultures of the Penicillium sp., isolated from the rhizosphere soil of Penicillium sp., led to the isolation of four new hybrid polyketide-terpenoid metabolites 160163 ().Citation67 Terretonin M 164 (), a new highly oxygenated tetracyclic meroterpenoid, was isolated from the thermophilic fungus Aspergillus terreus TM8.Citation68 Nine novel polyketide−terpenoid hybrids 165173 (), characterized by a 1-alkylated-3,5-dihydroxyphenyl derivative coupled with a modified farnesyl pyrophosphate (FPP) unit, were isolated from a soil-derived fungus Bipolaris zeicola. Compound 173 represents the first example of meroterpenoid having an unusual thiazol-2(3H)-one moiety.Citation69 Four dimeric acremines, bisacremines A-D 175178 (), with a novel carbon skeleton and a new monomer, acremine T 174 (), were obtained from cultures of the soil-derived fungus Acremonium persicinum SC0105.Citation5 Three dimeric acremines, bisacremines E-G 179181 ( and ), with an unusual carbon skeleton were isolated from cultures of the soil-derived fungus Acremonium persicinum SC0105.Citation70 By employing a large-scale culture approach, five undescribed compounds, namely asperanstinoids A–E 182186 (), were obtained from fungus Aspergillus calidoustus, which was isolated from the wetland soil collected at Dianchi Lake, Yunnan Province.Citation71 Ten new meroterpenoids, bipolaquinones A−J 187196 (), were isolated and identified from the fermented rice cultures of a soil-derived fungus, Bipolaris zeicola.Citation72 Six new meroterpenoids, bipolarinoids A—F 197202 ( and ), were isolated from a soil-derived fungus Bipolaris zeicola.Citation73 Three nortriterpenoids aspergorakhins B–D 203205 () were obtained from Aspergillus gorakhpurensis F07ZB1707, which was fermented by a salt-containing medium.Citation6 Encindolenes D-H 206210 (), were isolated from the fungus Penicillium sp. HFF16 from the rhizosphere soil of Cynanchum bungei Decne.Citation74

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Figure 4 Ketones 214–387. (A) Ketones 214–238. (B) Ketones 239–256. (C) Ketones 257–275. (D) Ketones 276–297. (E) Ketones 298–322. (F) Ketones 323–347. (G) Ketones 348–371. (H) Ketones 372–387.

Figure 4 Ketones 214–387. (A) Ketones 214–238. (B) Ketones 239–256. (C) Ketones 257–275. (D) Ketones 276–297. (E) Ketones 298–322. (F) Ketones 323–347. (G) Ketones 348–371. (H) Ketones 372–387.

Steroids

Compound 211 () was isolated from a soil fungus Curvularia borreriae (Pleosporaceae) strain HS-FG-237.Citation75 One new steroid 212 () was discovered in the extract of a soil-derived fungus Aspergillus flavus JDW-1.Citation76 Aspergorakhin A 213 () was obtained from the extract of soil-derived fungus Aspergillus gorakhpurensis F07ZB1707.Citation6

Ketones

Polyketides

A new polyketide compound 214 () was characterized from the ethyl acetate extract of a soil-derived fungal strain, Exophiala pisciphila PHF-9.Citation77 Pyrenocine J 215 and pyrenochaetic acid D 216 () were obtained from the fermentation broth of Curvularia affinis strain HS-FG-196.Citation78 Phytochemical investigation of the soil microfungus Eupenicillium parvum led to the isolation of two new compounds: a chromone derivative euparvione 217 and a new mycophenolic derivative euparvilactone 218 ().Citation79 A new polyketide penicillither 219 (), was isolated from the soil fungus Penicillium sp. PSU-RSPG9.Citation80 Tanzawaic acids I-L 220223 (), were isolated from the culture filtrates of the fungal strain Penicillium sp. IBWF104-06 isolated from a soil sample.Citation81 Four new pyrenochaetic acid derivatives pyrenochaetic acids E-H 227230 (), three new secalonic acid analogues Blennolides H-J 224226 () were purified from an Alternaria sp. isolate obtained from a Hawaiian soil sample.Citation82 Three new polyketides, namely, asperochrins A-C 231233 (), were isolated from Aspergillus ochraceus MA-15, a fungus obtained from the rhizospheric soil of marine mangrove plant Bruguiera gymnorrhiza.Citation83 A new diphenyl derivative, named iizukine A 234 () was isolated from coastal saline soil-derived fungus Aspergillus iizukae.Citation84 Three new pyran rings containing polyketides, penicipyrans A-B 235236 (), and penicipyran E 237 () were isolated from the saline soil-derived Penicillium raistrickii.Citation85 Cultivation of the mangrove rhizosphere soil-derived fungus Penicillium janthinellum HK1-6 with NaBr led to the isolation of two new tricyclic polyketides, penijanthinones A 238 () and B 239 ().Citation86 Two novel oxaphenalenone dimers, talaroketals A 240 and B 241 (), were isolated from the soil fungus Talaromyces stipitatus. Compound 240 features a rare benzannulated 5.6-spiroketal ring system within the dimeric bis(oxaphenalenone) skeleton, while the parent compound 241 harbors a fused bicyclic furano-pyran moiety.Citation87 Aspergorakhins E–J, L (242247, 248) () were obtained from the extract of soil-derived fungus Aspergillus gorakhpurensis F07ZB1707.Citation6 Six new polyketide-derived oxaphenalenone dimers, talaromycesone C 249 and macrosporusones A-E 250254 (), were isolated from the mycelium of the fungus Talaromyces macrosporus KKU-1NK8.Citation88 Four new oxaphenalenone dimers (bacillisporins I 255 and J 256 (), duclauxamides B 257 and C 258 ()) were isolated from the soil fungus Talaromyces bacillisporus BCC17645. Duclauxamides B and C were the rare N-containing oxaphenalenone dimers isolated from this fungus.Citation89 New polyketide-derived oligophenalenone dimers, 9a-epi-bacillisporin E 259 and bacillisporins F-H 260263 (), were isolated from the fungus Talaromyces stipitatus.Citation90 A new chromanone derivative Aspergone 264 () was isolated from Aspergillus sp. SCSIO41002.Citation91 A novel compound 7-methoxy-2,2-dimethyl-4-octa-4′,6′-dienyl-2H-napthalene-1-one 265 () was isolated from Penicillium sp.Citation92 Aspereusins C-E 266268 () were obtained from the fermentation product of Aspergillus terreus YIM PH30711.Citation93

Flavones

One new xanthone, penicillixanthone 269 (), was isolated from the soil fungus Penicillium sp. PSU-RSPG9.Citation80 Castochrin 270 (), a new dimer of sulochrin linked by thioether bonds and a new secalonic acid analogues (–)-Blennolide G 271 () were purified from an Alternaria sp. isolate obtained from a Hawaiian soil sample.Citation82 One new xanthone, penicillone C 272 (), is isolated from the soil fungus Penicillium citrinum PSU-RSPG95.Citation94 Compound 273 () was found from the fermentation product of Penicillium sp., HT-28 by various spectroscopic techniques.Citation95 In order to investigate new bioactive compounds, a piece of fungi Aspergillus aculeatus was obtained from the Jinyun mountain soil in Chongqing, China. A new compound 2-(2,4,6-Trihydroxyphenyl)-(7-hydroxy-5-methyl) chromone 274 () was obtained.Citation96 A new xanthone (penicillanthone, 275) () was isolated from the soil-derived fungus Penicillium aculeatum PSU-RSPG105.Citation97 Two new sterigmatocystin derivatives, oxisterigmatocystins E 276 and F 277 (), were isolated from the fungus Botryotrichum piluliferum.Citation98 Penixanthones A 278 and B 279 (), were isolated from the ethyl acetate extract of a culture of the fungus Penicillium sp. SYFz-1.Citation99 Five new 280284 () xanthones were isolated from the coastal saline soil-derived Aspergillus iizukae by application of an OSMAC (one strain many compounds) approach.Citation100 Three new blennolide derivatives, blennolides L-N 285287 (), were isolated from the soil-derived fungus Trichoderma asperellum PSU-PSF14.Citation101 A new metabolite, wentixanthone A 288 (), was obtained from the fungus Aspergillus wentii, isolated from soil of the hypersaline lake El Hamra in Wadi El-Natrun, Egypt.Citation102

Other ketones

Fusarpyrones A 289 and B 290 (), two new pyrone derivatives, were isolated from the soil fungus Fusarium solani PSU-RSPG37.Citation103 Two new benzopyranones, named coniochaetones E 291 and F 292 (), and one new benzophenone, penicillanone 293 (), are isolated from the soil fungus Penicillium citrinum PSU-RSPG95.Citation94 Five new secondary metabolites 294297 () and 298 () of Cephalotrichum microsporum were isolated, which were described, respectively, as 8′-O-(3R-Hydroxy-butyryl)-rasfonin 294, Cemironin A 295, Cemironin B 296, Cemironin C 297, 4-Methyl-8,10-dihydroxy-caprylic acid 298.Citation104 Two new meroditerpene pyrones, chevalone F 299 and 11-hydroxychevalone E 300 (), were isolated from the fungus Neosartorya pseudofischeri.Citation40 Peninaphones A-C 301303 (), were isolated from mangrove rhizosphere soil-derived fungus Penicillium sp. HK1-22.Citation105 The fungus, Aspergillus nidulans BF0142, was isolated from hot spring-derived soil collected at Hell Valley in Noboribetsu, Hokkaido, Japan. A new furanone compound designated helvafuranone 304 () was isolated from a culture broth of A. nidulans BF0142.Citation106 Enantiomers of a 2-benzofuran-1(3H)-one derivative [(–)-1 and (+)-1] described as (±)-europhenol A 305 (), was isolated and identified from the culture extract of Eurotium rubrum MA–150, a fungus obtained from the mangrove-derived rhizospheric soil.Citation107 Chromatographic separation of the broth extract of the soil-derived fungus Aspergillus sclerotiorum PSURSPG178 resulted in isolation of a furanone derivative, aspersclerotiorone E 306 ().Citation108 Three new secondary metabolites identified as harzianone 307 (), harzianol 308 (), harzianol acid 309 () were isolated from a culture of Cephalotrichum microsporum.Citation109 Two new aromatic butenolides, gotjawaside 310 and gotjawalide 311 (), possessing the 4-benzyl-3-phenylbutenolide motif, were isolated from a soil ascomycete Auxarthron sp. KCB15F070.Citation110 Ten novel furancarboxylic acids including four pairs of epimers (314, 315; 316, 317; 318, 319; 320, 321) (), were isolated from the fermentation of the soil-derived fungus Penicillium sp. sb62. Compounds 312317 represent the first class of natural furancarboxylic acids featuring a thiophene moiety.Citation111 We present a new furanone derivative from a white, woolly and fast-growing soil fungus, Penicillium sp. FG9RK, isolated from a soil sample collected from Agulu in Anambra state, Nigeria. The compound was identified as a new natural product, R-hexitronic acid 322 ().Citation112 Three new compounds, named peneciraistins A-C 323325 (), were isolated from saline soil-derived fungus Penicillium raistrickii. Among them, compounds 323 and 324 are rare benzannulate 6.6-spitoketals.Citation11 Sporulosol 326 (), a new ketal, has been isolated from the liquid fermentation cultures of a wetland-soil-derived fungus, Paraconiothyrium sporulosum.Citation113 Three pairs of new isopentenyl dibenzo[b, e]oxepinone enantiomers, (+)-(5S)-arugosin K 327, (-)-(5R)-arugosin K 328, (+)-(5S)-arugosin L 329, (-)-(5R)-arugosin L 330, (+)-(5S)-arugosin M 331, (-)-(5R)-arugosin M 332, and a new isopentenyl dibenzo[b, e]oxepinone, arugosin N 333 (), were isolated from a wetland soil-derived fungus Talaromyces flavus.Citation114 Two new indanones, asperunguisones A 334 and B 335 (), were isolated from the soil-derived fungus Aspergillus unguis PSU-RSPG204.Citation115 A pair of enantiomeric cyclopentenones (336a new and 336b new natural) were isolated from Aspergillus sclerotiorum.Citation116 Polluxochrin 337 and dioschrin 338 (), two new dimers of sulochrin linked by thioether bonds, and an additional new asterric acid analogue Dimethylamide asterrate 339 (), were purified from an Alternaria sp. isolate obtained from a Hawaiian soil sample.Citation82 Two new cyclohexanone derivatives, nectriatones A 340 and B 341 (), and one new natural product, nectriatone C 342 (), were isolated from the culture of Nectria sp. B-13 obtained from high-latitude soil of the Arctic.Citation117 Two new curvularin derivatives, curvulopyran 343 and ent-curvulone A 344 (), were isolated from a culture broth of the soil-derived fungus Aspergillus polyporicola PSU-RSPG187.Citation118 7-methoxy-2,3,6-trimethylchromone 345 was obtained from the ethyl acetate extract of a soil-derived fungal strain, Exophiala pisciphila PHF-9.Citation77 Cultivation of the mangrove rhizosphere soil-derived fungus Penicillium janthinellum HK1-6 with NaBr led to the isolation of two new brominated azaphilones, penicilones G 346 and H 347 ().Citation86 As part of the ongoing search for antibiotics from fungi obtained from soil samples, the secondary metabolites of Clonostachys rosea YRS-06 were investigated. Through efficient bioassay-guided isolation, three new bisorbicillinoids possessing open-ended cage structures, tetrahydrotrichodimer ether 348 () and dihydrotrichodimer ether A 349 and B 350 (), were obtained. Compounds 348350 are rare bisorbicillinoids with a γ-pyrone moiety.Citation119 Isochaetomium A2 351 (), a new bis(naphthodihydropyran-4-one), was isolated from the solid-state fermented rice culture of Chaetomium microcephalum.Citation120 Wentiphenone A 352 (), was obtained from the fungus Aspergillus wentii.Citation102 Four new azaphilones, penicilones A-D 353356 (), were isolated from the mangrove rhizosphere soil-derived fungus Penicillium janthinellum HK1-6.Citation121 Six new azaphilone derivatives, talaraculones A-F 357362 (), were obtained from the saline soil-derived fungus Talaromyces aculeatus.Citation122 One new double bond isomer of asteltoxin, isoasteltoxin 363 (), were isolated from an Antarctic soil-derived fungus, Aspergillus ochraceopetaliformis SCSIO 05702.Citation53 Pang et al found curvularone A 364 and 4-hydroxyradianthin 365 () from Curvularia inaequalis strain HS-FG-257.Citation123 A new compound 1-(2′,4′-dihydroxy-5′-methyl-3′-methylsulfanylmethylphenyl)-ethanone 366 () was isolated from the ethyl acetate extract of the fermentation broth of the fungus Penicillium crustosum YN-HT-15 isolated from the red soil in Yunnan Province, China.Citation124 A new compound (E)-4-hydroxy-3-[(4-hydroxy-3-methylbut-2-en-1-yl)oxy] benzoic acid 367 () was obtained from Aspergillus aculeatus.Citation96 Two new metabolites, talaflavuols B 368 and C 369 () were isolated from the wetland soil-derived fungus Talaromyces flavus BYD07-13.Citation125 Aspereusin B 370 () was isolated from the culture of Aspergillus terreus YIM PH30711.Citation93 Compounds Pyrenochaetayu 371 and compound Galinsogisoliyu 372 ( and ) were successfully separated from the fermentation broth of Seltsamia galinsogisoli sp. nov.Citation126 A novel compound 1-(4-hydroxy-2,6-dimethoxy-3,5-dimethylphenyl)-2-methyl-1-butanone 373 () was obtained from the soil-derived fungus Aspergillus sp. isolated from the rhizospheric soil of Phoenix dactylifera (Date palm tree).Citation127 Chemical investigation of the Dictyosporium digitatum fungus resulted in the identification of nine undescribed compounds 374382 (): Dictyosporin D 374, Dictyophthalide A 375, Dictyofuran A 376, Dictyofuran B 377, Dictyofuran C 378, Dictyofuran D 379, Dictyosporone A 380, Xylariolide E 381, Xylariolide F 382.Citation56 One cyclohexanone derivative aspergorakhin K 383 () was obtained from Aspergillus gorakhpurensis F07ZB1707.Citation6 Yanchao Xu et al fermented Aspergillus fumigatus GZWMJZ-152 in a rice solid medium and isolated four new sulfur-containing benzophenones, sulfurasperines A−D 384387 ().Citation128

Phenylpropanoids

Eight new polyphenols namely spiromastols A-F 388393 and spiromastols J-K 394395 () were obtained from the fermentation broth of Spiromastix sp. MCCC 3A00308.Citation129 Three new tetralol analogs, myrochromanols A-C 396398 (), were isolated from a soil fungus Myrothecium verrucaria HL-P-1.Citation130 Peneciraistin D 399 (), which belong isocoumarin, was isolated from saline soil-derived fungus Penicillium raistrickii.Citation11 Talacoumarins A 400 and B 401 (), were isolated from the ethyl acetate extract of the wetland soil-derived fungus Talaromyces flavus BYD07-13.Citation131 Compounds 402404 () were isolated from the fermentation broth of a deep sea-derived fungus Spiromastix sp. MCCC 3A00308.Citation129 Eight new isocoumarin glycosides 405412 () were obtained from the solid culture of the wetland soil-derived fungus Metarhizium anisopliae (No. DTH12-10).Citation132 Two new isocoumarin derivatives, talaisocoumarins A 413 and B 414 (), and one new related metabolite, talaflavuol A 415 () were isolated from the wetland soil-derived fungus Talaromyces flavus BYD07-13.Citation125 Penicipyrans C 416 and D 417 (), were isolated from Penicillium raistrickii.Citation85 In research on novel secondary metabolites from microorganisms, two new 418419 () were derived from soil fungus Hypoxylon sp. The two new compounds are assigned as (3R, 4R)-4,8-Dihydroxy-5-(hydroxymethyl)-3-methylisochroman-1-one 418 and (3R, 4S)-4,8-dihydroxy-5-(hydroxymethyl)-3-methylisochroman-1-one 419.Citation133 Two new epimeric dihalogenated diaporthins, (9R*)-8-methyl-9,11-dichlorodiaporthin 420 and (9S*)-8-methyl-9,11-dichlorodiaporthin 421 (), have been isolated from the soil fungus Hamigera fusca NRRL 35721.Citation134 Chemical characterization of ethyl acetate extract of Exophiala sp. has afforded the isolation of three compounds including a new isocoumarin named exophiarin 422 ().Citation135

Figure 5 Phenylpropanoids 388–422. (A) Phenylpropanoids 388–417. (B) Phenylpropanoids 418–422.

Figure 5 Phenylpropanoids 388–422. (A) Phenylpropanoids 388–417. (B) Phenylpropanoids 418–422.

Quinones

Two new benzoquinones, citriquinones A 423 and B 424 (), were isolated from Penicillium citrinum.Citation136 Penicilliquinone 425 () was isolated from the fermentation product of Penicillium sp. PSU-RSPG9.Citation80 Tansakul et al investigated secondary metabolites produced by Penicillium herquei PSU-RSPG93 isolated from soil collected from the Plant Genetic Conservation Project under the Royal Initiation of Her Royal Highness Princess Maha Chakri Sirindhorn at Ratchaprapa Dam in Suratthani province, Thailand. They obtained one new phenalenone derivative, peniciherqueinone 426 ().Citation137 Two new phenalenones, aspergillussanones A 427 and B 428 () were obtained from the mycelial extract of the soil fungus Aspergillus sp. PSU-RSPG185.Citation30 A new naphthoquinone, solaninaphthoquione 429 (), was isolated from the soil fungus Fusarium solani PSU-RSPG227.Citation138 Cultivation and fractionation of secondary metabolites from Aspergillus kumbius revealed a new bis-indolyl benzoquinone, kumbicin D 430 ().Citation22 Membrane active compound PA3-d10 431 () produced by Aspergillus flavus strain demonstrated antimicrobial activities against bacteria and yeast strains.Citation139 The diastereomeric mixtures of the bianthrones wentibianthrone A (432a, b) () and wentibianthrone B (433a, b) (), as well as (10R,10′S)-wentibianthrone C (434a) and (10R,10′R)-wentibianthrone C (434b) () were obtained from the fungus Aspergillus wentii.Citation102 The study of a Hawaiian volcanic soil-associated fungal strain Penicillium herquei FT729 led to the isolation of one unprecedented benzoquinone-chromanone, herqueilenone A 435 () Herqueilenone A 435 contains a chroman-4-one core flanked by a tetrahydrofuran and a benzoquinone with an acetophenone moiety.Citation140 Three unreported phenalenone derivatives 436–438 (), named ent-12-methoxyisoherqueinone (436) (), (−)-scleroamide (437) (), and (+)-scleroamide (438) () were isolated from the Hawaiian soil fungus Penicillium herquei FT729, collected on the Big Island, Hawaii.Citation141

Figure 6 Quinones 423–438.

Figure 6 Quinones 423–438.

Esters and Lactones

Esters

A new ester of 2.4-dihydroxy-6-methylbenzoic acid 439 () named 3-Hydroxy-5-methylphenyl 2.4-dihydroxy-6-methylbenzoate was isolated from the fungus Neosartorya pseudofischeri S.W. Peterson.Citation10 Six new polyesters, talapolyesters A-F 440445 (), were isolated from the wetland soil-derived fungus Talaromyces flavus BYD07-13. All the polyesters are composed of (R)-2,4-dihydroxy-6-(2-hydroxypropyl)benzoic acid and (R)-3-hydroxybutyric acid/(S)-3,4-dihydroxybutyric acid residues.Citation142 Liu et al obtained a new compound R-3-(3′-acetyl-2′,6′-dihydroxy-5′-methylphenyl)-2-methylpropionic acid methyl ester 446 () isolated from the ethyl acetate extract of the fermentation broth of the fungus Penicillium crustosum YN-HT-15.Citation124 Compound 4-(4- hydroxyphenethoxy)-4-oxobutanoic acid 447 (), was isolated from the soil fungus Fusarium solani PSU-RSPG227.Citation138 Penicillithiophenols A 448 and B 449 () were isolated from Penicillium copticola PSURSPG138.Citation51

Figure 7 Continued.

Figure 7 Continued.

Figure 7 Continued.

Figure 7 Continued.

Figure 7 Esters and lactones 439–490. (A) Esters and lactones 439–453. (B) Esters and lactones 454–478. (C) Lactones 479–490.

Figure 7 Esters and lactones 439–490. (A) Esters and lactones 439–453. (B) Esters and lactones 454–478. (C) Lactones 479–490.

Lactones

In search for anti-influenza virus inhibitors from marine-derived fungi, a strain identified as Aspergillus terreus Gwq-48, was isolated from a mangrove rhizosphere soil sample collected in the coast of Fujian province. The study of its chemical components led to the isolation of one new aspulvinone, isoaspulvinone E 450 ().Citation143 One new γ-butyrolactone, aspergillulactone 451 () was isolated from the mycelial extract of the soil fungus Aspergillus sp. PSU-RSPG185.Citation30 Two new hydroxycitric acid lactone derivatives named cinatrins D 452 and E 453 (), were obtained from the fungus Virgaria boninensis FKI-4958.Citation44 One phthalide (asperlide, 454) and one depsidone (aspersidone, 455) () were obtained from the fungus Aspergillus unguis PSURSPG199.Citation144 Penicimenolides A-E 456460 () and penicimenolide F 461 () were isolated from the culture broth of a strain of Penicillium sp. (NO. SYP-F-7919).Citation145 Chromatographic separation of the broth extract of the soil-derived fungus Aspergillus sclerotiorum PSURSPG178 resulted in isolation of four γ-butenolide-furanone dimers, aspersclerotiorones A-D 462–465 (), and two γ-butenolide derivatives, aspersclerotiorones F 466 and G 467 ().Citation108 Zhou et al isolated and identified a new sesquiterpene lactone named eut-Guaiane sesquiterpene 468 () from the fungus Eutypella sp. derived from the soil of high latitude of Arctic.Citation146 New natural products, designated pochoniolides A and B 469470 (), were isolated from the cultured broth of fungal strain FKI-7537 using a physicochemical screening methodology.Citation147 Three new γ -hydroxyl butenolides named aspersclerolides A-C 471473 (), a pair of new enantiomeric spiro-butenolides named (±)-aspersclerolide D 474 (), were isolated from Aspergillus sclerotiorum.Citation116 Investigation of the soil-derived fungus Lasiodiplodia theobromae NSTRU-PN1.4 resulted in the isolation of two new dimeric c-lactones botryosphaerilactones D 475 and E 476 ().Citation148 One new metabolite, therlanubutanolide A 477 (), was isolated from the YGP culture broth of Thermomyces lanuginosus.Citation149 During screening for microbial regulators of bone metabolism, a new compound, 6-ethoxy-5,6-dihydropenillic acid 478 (), was isolated from the culture broth of the soil-derived fungus Penicillium sp. BF-0343.Citation150 Twelve new resorcylic acid lactones (RALs) including three new 16-membered RALs 479481 (), eight new 14-membered RALs 482489 (), and one new 12-membered RAL 490 (), were identified from the fermentation of the soil-derived fungus Ilyonectria sp. sb65. These new compounds are assigned, respectively, as Ilyoresorcy A 479, Atrop-ilyoresorcy A 480 Ilyoresorcy B 481, Ilyoresorcy C 482, Ilyoresorcy D 483, Ilyoresorcy E 484, Ilyoresorcy F 485, Ilyoresorcy G 486, Ilyoresorcy H 487, Ilyoresorcy I 488, Ilyoresorcy J 489 and Ilyoresorcy K 490.Citation151

Other Compounds

Prenylterphenyllins A-C 491493 () and prenylcandidusins A-C 495497 (), and one new polyhydroxy-pterphenyl named 4-dehydro-3-hydroxyterphenyllin 494 (), were obtained from Aspergillus taichungensis ZHN-7-07, a root soil fungus isolated from the mangrove plant Acrostichum aureum.Citation152 A new benzoic acid derivative 4-hydroxy-3-(3-methyoxy-3-methylbutyl)-benzoic acid 498 () was isolated from Curvularia inaequalis strain HS-FG-257.Citation153 Eight new 2-pentenedioic acid derivatives 499506 () were isolated from a soil-derived fungus Gongronella butleri collected in Cameroon. The isolated compounds feature a 2-pentenedioic acid core structure substituted by a 2-alkyl chain that has even number of carbon atoms (C6, C8, and C10) with or without an oxygenated substituent.Citation154 Peniciketals A-C 507509 (), three new spiroketals with a benzo-fused 2.8-dioxabicyclo[3.3.1]nonane moiety, were isolated from the saline soil-derived fungus Penicillium raistrichii.Citation155 Masaphy et al report on the purification and characterization of a novel anticandidal echinocandin – MIG0310 510 () from Fusarium brachygibbosum strain MS-R1 and the elucidation of its molecular structure.Citation156 Two new cyclic carbonate derivatives, aspergillusols A 511 and B 512 () which contain an unusual cyclic carbonate functionality, and one new eutypinic acid derivative, aspergillusic acid 513 () were found from Aspergillus sp. PSU-RSPG185.Citation30 The soil fungus Gymnascella dankaliensis was collected in the vicinity of the Giza pyramids, Egypt. When grown on solid rice medium the fungus yielded four new compounds including 11′-carboxygymnastatin N 514, gymnastatin S 515, dankamide 516, and aranorosin-2-methylether 517 ().Citation157 A new diphenyl derivative, named iizukine B 518 (), was isolated from coastal saline soil-derived fungus Aspergillus iizukae.Citation84 A new compound namely (13-(3,3-dihydroxypropyl)-1,6-dihydroxy-3,4-dihydro-1H-isochromen-8(5H)-one 519 () was isolated from an ethyl acetate extract of the borne fungi Sclerotium rolfsii. The new compound is also known as Sclerotium.Citation158 A new lovastatin analogue versicorin 520 (), was isolated from mycelial solid cultures of Aspergillus versicolor SC0156. The new compound versicorin 520 possesses a hexahydro-2H-naphtho[1,8-bc]furan moiety, which is a rare type of the lovastatin-analogous compounds.Citation159 Three new lovastatin analogues 521–523 () were isolated from the soil-derived fungus Aspergillus sclerotiorum PSU-RSPG178.Citation160 Four previously undescribed metabolites including two lovastatin analogues, asterreusin A 524 and one unnamed compound 525 (), additionally aspereusin A 526 and epiaspereusin A 527 () were isolated from the culture of Aspergillus terreus YIM PH30711.Citation93 Three new diphenyl ether derivatives (penicillidic acids A-C, 528530) () were isolated from the soil-derived fungus Penicillium aculeatum PSU-RSPG105.Citation97 Three new diphenyl ethers, aspergillusethers B-D 531533 (), were isolated from the soil-derived fungus Aspergillus unguis PSU-RSPG204.Citation115 Two new aspinotriol derivatives 534535 ( and ) determined as melleusin A 534, B 535 were isolated from a soil-borne fungus Aspergillus melleus.Citation161 A new diphenyl ether 3-methylpentyl-2, 4-dichloroasterrate 536 (), was isolated from the metabolites of a wetland fungus Aspergillus flavipes. PJ03-11.Citation162 Two new unsaturated fatty acids, 6R,8R-dihydroxy-9Z,12Z-octadecadienoic acid 537 () and methyl-6R,8R-dihydroxy-9Z,12Z-octadecadienoate 538 (), were isolated from the mangrove rhizosphere soil-derived fungus Penicillium javanicum HK1-22.Citation163 A new azo compound, penoxalin 539 (), a new isochroman carboxylic acid, penisochroman B 541 (), two new natural products, penisochroman A 540 () and 2,6-dihydroxy-4-[(2R)-2-hydroxyheptyl] benzoic acid 542 (), were isolated from wetland soil fungus Penicillium oxalicum GY1.Citation164 Fan et al report a new pentacyclic decalinoylspirotetramic acid derivative, pyrenosetin D 543 (), from an endophytic strain Pyrenochaetopsis FVE-087.Citation165 One new benzofuranoid 544 (), was isolated and characterized from fungus Aspergillus calidoustus.Citation58 Two new benzothiazoles (545 and 546) () were isolated from the cave soil-derived fungus Aspergillus fumigatus GZWMJZ-152.Citation128

Figure 8 Continued.

Figure 8 Continued.

Figure 8 Continued.

Figure 8 Continued.

Figure 8 Other compounds 491–546. (A) Other compounds 491–513. (B) Other compounds 514–534. (C) Other compounds 535–546.

Figure 8 Other compounds 491–546. (A) Other compounds 491–513. (B) Other compounds 514–534. (C) Other compounds 535–546.

Biological Activity of New Compounds Derived from Soil Fungi

Anticancer Activities

The cytotoxicity of compounds 491, 494 and 496 was evaluated on HL-60, A-549, and P-388 cell lines using the SRB and MTT methods with adriamycin (ADM) as positive control Compound 491 exhibited moderate activities against all three cell lines (IC50 1.53–10.89 μM), whereas compounds 494 and 496 displayed moderate activities only against the P-388 cell line (IC50 of 2.70 and 1.57 μM, respectively).Citation152 Compound 93 exhibited anticancer activity against MCF-7, KB, and NCI-H187, with IC50 values in the range of 12.56–24.91 μg/mL.Citation48 Compound 214 exhibited moderate growth inhibition against A-549, Hela, PANC-28 and BEL-7402 cell lines with the IC50 values of 16.4, 23.4, 20.3, and 30.1 μg/mL, respectively. 10-hydroxycamptothecin was used as the positive control with the IC50 values of 0.5, 5.9, 10.6, and 4.6 μg/mL, respectively.Citation77 The cytotoxic effects of compound peneciraistin C 325 were preliminarily evaluated against human lung adenocarcinoma (A549) and human breast adenocarcinoma (MCF-7) cell lines by the MTT method. Compound 325 showed comparatively significant cytotoxicities against A549 and MCF-7-60 cell lines with IC50 values of 3.2 and 7.6 μM, respectively.Citation11 Pan et al report the anticancer mechanisms of Pe-C in a variety of lung cancer cells. The results showed that Pe-C induced caspase-independent autophagic cell death and elevated mitochondrial-derived reactive oxygen species levels, which indicated that Pe-C could be a potential drug candidate for therapy of lung cancer.Citation166 Compound pyrenocine J 215 showed cytotoxic activity against the human hepatic cancer cell line HepG2 with an IC50 value of 28.5 μg/mL.Citation78 Compound 4 showed cytotoxic activity against A-549, Hela, PANC-28 and BEL-7402 cell lines with IC50 values of 76.3, 77.2, 107.5 and 89.5 μmol·L−1, respectively.Citation12 Compound 7 showed remarkable activities with IC50 values of 1.83 and 4.80 μM on P388 and HL-60 cells, respectively. The target of racemic 7 was also investigated and the (12R,28S,31S)-7 enantiomer showed selectivity against topoisomerase I.Citation14 Compound 8 showed weak activity with IC50 values of 55.1 and 30.5 μM on BEL-7402 and A-549 cells, respectively.Citation15 Compound 364 exhibited cytotoxic activity against the ACHN and HepG2 cell lines with IC50 values of 4.78 and 13.11 μg mL −1, respectively. The values of 365 were 54.18 and 52.07 μg mL −1.Citation123 Sartorypyrone A 128 was evaluated for its capacity to inhibit the in vitro growth of MCF-7 (breast adenocarcinoma), NCI-H460 (nonsmall cell lung cancer) and A375-C5 (melanoma) cell lines, using the protein binding dye SRB method. Interestingly, sartorypyrone A 128, which possesses a monocyclic diterpene core, was more selective, exhibiting similar inhibitory activity to sartorypyrone B against A375-C5 (GI50=21.5±1.9 μM), but less active against MCF-7 (GI50=46.3±7.6 μM) and NCI-H460 (GI50=37.3±4.0 μM) cell lines.Citation16 Citriquinone A 423 was assayed for cell migration inhibitory activity using human cancer cell line HEp 2. After growing cells in vitro in 96 well plates a scratch was made on wells with cells at the confluence stage. Citriquinone A 423 at a concentration of 0.5 mg/mL (dissolved in growth medium containing 1% DMSO) was introduced into wells and incubated for 24 h. Development of new cells to reduce the width of the scratch from its initial stage was determined qualitatively by comparing the width of the scratch after incubation in each well in the presence of test sample and control (1% DMSO in the growth medium) using microscopic images. It was revealed that 423 had a moderate inhibitory effect on the growth/migration of the HEp2 cells when compared with the control.Citation136 Compounds 444 and 445 were evaluated by MTT method for their cytotoxic activities against five tumor cell lines, HL-60, SMMC-7721, A-549, MCF-7, and SW480, with cisplatin and paclitaxel as the positive controls. They exhibited cytotoxicity against the tested tumor cell lines. The IC50 values of compound 444 are 14.81,18.39,17.66,14.59 and 26.62 μM respectively. The IC50 values of compound 445 are 13.62,15.74,11.09,15.96 and 15.54 μM, respectively.Citation142 Peniciketals A-C 507509 showed selective activities against HL-60 cells with IC50 values of 3.2, 6.7, and 4.5 μM, respectively (doxorubicin as a positive control (IC50s: 0.31, 0.085, and 0.23 μM, respectively)), while were not active on other cells (IC50 > 10 μM).Citation155 Libertellenone H 130 showed cytotoxicity against seven human tumor cell lines: U251, SW-1990, SG7901, MCF-7, Huh-7, Hela and H460 cell lines at a range between 3.31 and 44.1 μM.Citation59 Compound cytochalasin Z24 53 exhibited moderate cytotoxicity toward human breast cancer MCF-7 cell line with IC50 of 9.33 μM.Citation29 Compound aspergillussanone A 427 exhibited weak activity toward KB and Vero cells with IC50 values of 48.4 and 34.2 μM, respectively.Citation30 Compounds Polluxochrin 337, dioschrin 338 and Castochrin 270 showed weak mammalian cell cytotoxicity effects against pancreatic cancer cells (MIA PaCa-2) with IC50 values of 50.8, 30.3, and 29.3 μM, respectively.Citation82 Bisacremines A-B 175176 exhibited weak cytotoxicity against HeLa cells with IC50 values of 10.7±1.0 and 9.3±1.7 μM respectively. And 176 also showed modest activity against A549 and HepG2 cells with IC50 values of 41.3±4.1 and 31.1±2.1 μM respectively.Citation5 Compound aranorosin-2-methylether 517 showed potent cytotoxicity against the murine lymphoma cell line L5178Y with IC50 values of 0.44 μM.Citation157 Compound solaninaphthoquione 429 showed significant cytotoxic activity against breast cancer (MCF-7) cells and mild cytotoxic activity against oral human carcinoma (KB) cells (IC50 values of 21.3 and 22.6 μM, respectively) compared to standard compound.Citation138 Iizukines A 234 and B 518 were tested their cytotoxicities against HL-60 (human promyelocytic leukemia), BEL-7402 (human hepatoma) and A-549 (human lung carcinoma) were tested by the MTT assay in vitro with 5-fluorouracil (5-FU) as positive control. The two compounds showed weak cytotoxic activities. IC50 values of compound 234 were 26.5, 32.7 and 18.2 μM respectively, and IC50 values of compound 518 were 48.7, 56.6 and 32.3 μM.Citation84 Penicilleremophilane A 99 was obtained from Penicillium copticola PSURSPG138. It showed much weaker cytotoxic activity.Citation51 Cytotoxicity studies of the compound 265 on cancer cell lines showed a valuable cytotoxic potential against all tested human cancer cell lines. Further, the compound induces apoptosis in lung cancer (A549) cells revealed by increase the distribution of nuclear DNA in Sub-G1 phase as observed in flow cytometry.Citation92 For compound 519, in the present study rhodamine-123 exclusion screening test on human mdr1 gene transfected mouse gene transfected L5178 and L5178Y mouse T-cell lymphoma which showed excellent MDR reversing effect in a dose-dependent manner against mouse T-lymphoma cell line. Moreover, molecular docking studies of compound 519 also showed better results as compared with the standard.Citation158 Kumbicin C 33 was found to inhibit the growth of mouse myeloma cells (IC50 0.74 μg mL−1).Citation22 Penicimenolides B-D 457459 exhibited potent cytotoxicity against the U937 and MCF-7 tumour cell lines and showed moderate cytotoxic activity against the SH-SY5Y and SW480 tumour cell lines. There is experimental evidence that compound 457 may act as a potential MEK/ERK inhibitor, it is still need further study in the future.Citation145 Penicipyran E 237 showed cytotoxicity effects on HL-60 and K562 cell lines with IC50 values of 4.4 and 8.5 μM, respectively.Citation85 Compounds 6874 showed potent to moderate cytotoxicity against the L5178Y mouse lymphoma cell line with IC50 values ranging from 0.99 to 14.1 μM.Citation35 Asterriquinol E 34 was bioassayed for its inhibitory effects on NO production induced by LPS in microglia cells with NG-monomethyl-L-arginine (L-NMMA) as a positive control (IC50 4.8 μM). The results showed that compound 34 showed moderate activity with IC50 49.7 μM. Cell viability was determined at the same time by the MTT method and only compound 1 exhibited cytotoxicity with an IC50 9.7 μM.Citation23 Bacillisporin H 263 exhibited modest cytotoxicity against HeLa cells.Citation90 Compound Aspergiketone 101 was cytotoxic towards HL-60 and A549 cell lines with IC50 values of 12.4 and 22.1 μM, respectively.Citation52 Oxisterigmatocystins E and F (276 and 277, respectively) exhibited cytotoxicity against KB, MCF-7, and NCI-H187 cell lines (IC50 = 7.7–78.6 μM). However, compounds 276277 showed cytotoxic effects against the Vero cell line (IC50 = 4.3–9.7 μM).Citation98 Compound 107 displayed growth inhibitory effect against human Mantle cell lymphoma JEKO-1 and human hepatoma carcinoma HepG2 with IC50 values of 8.4 and 28.5 μM, respectively.Citation54 Compound penixanthone A 278 had weak cytotoxicity against the tested cancer cell lines, H1975, MCF-7, K562, HL7702 at concentration of 30 μM.Citation99 Compound 211 exhibited poor cytotoxicity toward HCT-116 cells (20.5% inhibition at the dose of 100 μM, IC50 >100 μM), while the IC50 value of the positive control (doxorubicin) was 0.365±0.023 μM.Citation75 Compound 468 exhibited in vitro a little cytotoxicity towards SGC7901 cell line with IC50 value of 39.8 μM.Citation146 Compound 160 showed potent cytotoxic capability against HL-60, THP-1 and Caco 2 cell with IC50 values of 3.4 μM, 4.3 μM, 10.5 μM, and compound 161 showed significant inhibiting activities against HL-60 cell line and THP-1 cell line (IC50 =7.9 μM, 11.3 μM, respectively), using 5-fluorouracil as the positive drug with IC50 values of 6.4 μM, 4.4 μM, 56.6 μM for HL-60, THP-1 and Caco 2 cells, respectively.Citation67 The cytotoxic effects of 3-methylpentyl-2, 4-dichloroasterrate 536 was evaluated using the MTT method on HL-60, HCT116, PC-3, and HT-29 cancer cell lines. The results showed that its IC50 values were larger than 5-fluorouracil, smaller than 80 μM.Citation162 Libertellenones O-S 133137 and eutypellenones A and B (138 and 139) exhibited cytotoxicities against HeLa, MCF-7, HCT-116, PANC-1, and SW1990 cells, with IC50 values in the range of 0.8 to 29.4 μM. Compounds 138 and 139 could dose-dependently inhibit the activity of NF-κB and exhibited significantly inhibitory effects on nitric oxide production induced by lipopolysaccharide.Citation61 (9R*)-8-methyl-9,11-dichlorodiaporthin 420 and (9S*)-8-methyl-9,11-dichlorodiaporthin 421, were evaluated the cytotoxicity against seven cancer cell lines: human-derived cell lines CCD25sk (human fibroblasts), SHSY5 (neuroblastoma), MiaPaca-2 (epithelial pancreas carcinoma), MCF-7 (breast adenocarcinoma), HepG2 (hepatocellular carcinoma), A2058 (epithelial melanoma), and A549 (lung carcinoma), exhibiting moderate activity against two of them. While both dichlorinated compounds 420421 were active against neuroblastoma (SHSY5y cells: 420 CC50 = 39.2 μM, and 421 CC50 = 36.2 μM). These results correlate well with the cytotoxicity against HeLa cells recently reported for dichlorodiaporthin (CC50 = 9 μg/mL = 28 μM), a compound considered as a mycotoxin.Citation134 Sporulosol 326 showed modest cytotoxicity toward the human tumor cell line T24, with an IC50 value of 18.2 μM.Citation113 Libertellenone M 140 and libertellenone N 141 were tested for cytotoxic activities against HeLa, MCF-7, HCT-116, K562, and SW1990 cell lines. Compound 141 displayed potent cytotoxicity against K562 cells with IC50 value of 7.67 μM and moderate cytotoxicity against HeLa, MCF-7, and SW1990 cell lines with IC50 values of 30.06, 18.52, and 24.36 μM, respectively, and compound 140 showed weaker cytotoxic activity against these five tumor cell lines with IC50 values of 34.78, 32.20, 26.67, 40.85 and 24.36 μM, respectively.Citation62 Compound iizukine C 57 exhibited cytotoxic effect towards HL-60 and A549 cell lines with IC50 values of 3.8 and 7.2 μM, respectively.Citation31 Compounds 471 and 473 showed selective cytotoxicity against HL60 (IC50: 6.5 and 12.1 μM, respectively), A549 (IC50: 8.9 and 16.7 μM, respectively), and HL-7702 (IC50: 17.6 and 22.8 μM, respectively) cell lines.Citation116 The cytotoxicities of Compound 212 was evaluated against A-549, Hela, HCT-116, MGC-803, and HO-8910 cell lines. Compound 212 exhibited various activities with the IC50 values 5.0 to 22.4 μM, respectively.Citation76 Tolypocladin A 38 displayed weak cytotoxicity against A549, Huh7, LN229, MGC and MHCC97H, LOVO and MDA231 cell lines with IC50 values from 16.32 to 37.80 μM (positive control camptothecin: 0.32–31.8 nM) and suppressed the growth and viability of the HCC cells T1224 in the patient-derived organoids (PDOs) model.Citation25 8′-O-(3R-Hydroxy-butyryl)-rasfonin 294 and Cemironin A 295 displayed significant cytotoxicity on five human cancer cell lines: 786-O, A549, HeLa and MCF-7 cell lines, with the IC50 values <20 μM, which are more effective than positive control 5-fluorouracil and could be considered to be potential as antitumor agents, in which they could significantly inhibit the cancer cells growth in a dose-dependent manner.Citation104 Nectriatone A 340 showed cytotoxicities against SW1990, HCT-116, MCF-7, and K562 cells, with IC50 values in the range of 26.37–42.64 μM.Citation117 Compound 251 also showed cytotoxicity against NCI-H187 cells with an IC50 value of 16.73 μM. Moreover, macrosporusones A-B 250251 and macrosporusone D 253 exhibited cytotoxicity against Vero cells with IC50 values in the range of 13.74–69.77 μM.Citation88 Compounds 48 and 49 showed moderate cytotoxicity against HepG2 human hepatocellular carcinoma cells with an IC50 of 8.7 and 19.4 μM, respectively. The IC50 value of the positive control (cis-platin) was 3.14 μM.Citation26 Compound 542 displayed significant cytotoxicity against human esophageal carcinoma cells OE19 with an IC50 value of 5.50 μM.Citation164 Compounds 255258 had low cytotoxicity against both cancerous (MCF-7 and NCIeH187) and non-cancerous (Vero) cells.Citation89 Compounds 6265 showed moderate cytotoxicity against five tested human tumor cell lines: HeLa, PC-3, A549, HepG-2 and HL-60.Citation33 Pyrenosetin D 543 showed toxicity towards both A-375 and HaCaT cells with IC50 values of 77.5 and 39.3 μM, respectively.Citation165 Compounds 165,166, and 168 exhibited moderate cytotoxic activities with IC50 values ranging from 18.4 to 29.4 μM.Citation69 The cytotoxicity assay revealed that asperanstinoid D 185, dehydroaustinol, and austin displayed considerable cytotoxicity against the HL-60 and SU-DHL-4 tumor cell lines with IC50 values ranging from 15.7 to 27.8 μM.Citation71 Protein tyrosine phosphatases (PTPs) are signaling enzymes that regulate tyrosine phosphorylation. The disorder of PTPs could induce human diseases such as tumor, diabetes, autoimmune diabetes, and infectious diseases. Compounds 213, 203, and 383 showed inhibitory effect against PTPs including PTP1B, SHP1, and TCPTP in vitro. Among them, compound 213 might exhibit selective activities against PTP1B and SHP1 over TCPTP with IC50 values 0.57, 1.19, and 22.97 μM, respectively. Compounds 213 and 203 exhibited modest cytotoxicity against tumor cell lines A549, HeLa, Bel-7402, and SMMC-7721 with IC50 values in the range of 6.75–83.4 μM.Citation6 The inhibitory activity of the isolated compounds (436438) against indoleamine 2.3-dioxygenase 1 (IDO1) was assessed. Compounds 436 inhibited IDO1, with the IC50 value of 32.59 μM.Citation141

Antimicrobial Activities

Compounds 95 and 96 were tested for antifungal activities. 95 and 96 were active against plant pathogenic fungi Rhizoctonia solani and Fusarium oxysporum using standard agar diffusion tests at 20 μg/disk.Citation49 Compound 5 was tested for its abilities to inhibit both cell viability and biofilm formation of Candida albicans. It demonstrated dose-dependent activity in the biofilm inhibition assay with an IC50 value of 1.4 ± 0.2 μM.Citation13 Citriquinone A 423 was evaluated for antibacterial activity against Bacillus sp. At a dose of 250 µg/disc using the Kirby-Bauer Disc Diffusion method. Amoxicillin 25 µg and a disc soaked with MeOH and dried completely served as positive and negative control, respectively. It was found that 423 had moderate antibacterial activity compared with amoxicillin.Citation136 Compounds 97 and 98 exhibited selective activity against Colletotrichum gloeosporioides with MIC values of 1.0 and 0.125 μg/mL, respectively, the latter of which is better than that of the positive control, zeocin (MIC 0.25 μg/mL). This result indicated that compounds 97 and 98 are responsible for the activity against C. gloeosporioides during the preliminary assay of the crude extract, and acetylation of 4-OH likely enhanced the activity.Citation50 Libertellenone G 129 exhibited antibacterial activity against Escherichia coli, Bacillus subtilis and Staphylococcus aureus.Citation59 Novel echinocandin compound MIG0310 510 exhibiting anticandidal activity, MIG0310 showed activity against two ATCC strains and 10 clinical isolates of Candida albicans. It also showed activity against a clinical isolate of C. tropicalis, showing a potential inhibition of this particular Candida species as well. The anticandidal agent had MFC values (killing activity) similar to the MIC for C. albicans, reminiscent of other echinocandins used as drugs, which showed also kill at growth-inhibiting concentrations for most of Candida species isolates (Moore et al 2001).Citation156 Isochaetomium A2 351 possessed significant antimicrobial activity against Escherichia coli 1.044, Staphylococcus aureus 1.252, and Bacillus subtilis 1.079.Citation120 Minimum inhibitory concentration (MIC) of the active compound 273 ranged from 0.5 to 15 μg/mL. Viable cell count studies of the active compound 273 showed Staphylococcus aureus, Escherichia coli, Staphylococcus epidermidis, and Salmonella typhimurium 1 to be the most sensitive.Citation95 Compounds Polluxochrin 337, dioschrin 338 and Castochrin 270 exhibited anti-MRSA activity, with MIC values of 4.1, 4.9, and 3.2 μM (2.9, 3.2, and 2.0 μg/mL), respectively, whereas the MIC for chloramphenicol was 5 μM (1.6 μg/mL).Citation82 Compounds 388390 exhibited potent antibacterial activities against all tested strains of bacteria, including Xanthomanes vesicatoria ATCC 11633, Pseudomonas lachrymans ATCC11921, Agrobacterium tumefaciens ATCC11158, Ralstonia solanacearum ATCC11696, Bacillus thuringiensis ATCC 10792, Staphylococcus aureus ATCC 25923 and Bacillus subtilis CMCC 63501, with minimal inhibitory concentration (MIC) values ranging from 0.25 to 4 μg/mL, while compounds 394395 and 404 showed moderate inhibition with MIC values in the range of 8–64 μg/mL.Citation129 The antibacterial activity of asperochrin A 231 was evaluated. Compound 231 showed inhibitory activity against aquatic pathogenic bacterial Aeromonas hydrophila, Vibrio anguillarum, and Vibrio harveyi. However, compound 231 displayed selective antibacterial activity against A. hydrophilia, V. anguillarum, and V. harveyi, with IC50 values ranging from 8.0 to 16.0 μg/mL.Citation83 Compounds 452 and 453 were shown to be weakly active against the bacteria Bacillus subtilis KB 211 (ATCC 6633) with inhibition zones of 7.3 and 7.2 mm, respectively, as well as against E. coli KB 213 (NIHJ), with inhibition zones of 10.9 and 14.7 mm, respectively, at 100 μg per 6 mm disc. Compound 89 displayed only weak antibacterial activity against E. coli KB 213 (NIHJ) with an inhibition zone of 7.8 mm at 30 μg per 6 mm disc.Citation44 Penicilleremophilane A 99 was approximately half as active against Plasmodium falciparum with the IC50 value of 3.45 μM.Citation51 MIC of the compound 265 ranged from 0.5 to 15 µg/mL, which was found to be comparable with the standard antibiotics.Citation92 Compound 349 (MIC 25 μg/mL) exhibited stronger antibacterial activity against E. coli than erythromycin, streptomycin, and ampicillin. Compound 350 (MIC 50 μg/mL) exhibited more prominent activity than streptomycin against Bacillus subtilis. Compound 350 (MIC 50 μg/mL) also displayed similar activity against Escherichia coli compared to erythromycin and ampicillin, and greater than streptomycin.Citation119 Kumbicin C 33 was found to inhibit the growth of Gram-positive bacterium Bacillus subtilis (MIC 1.6 μg mL−1).Citation22 Compound 405 showed antibacterial activity comparable with (Z)-4-bromo- 5-(bromomethylene)-2(5H)-furanone (BF), which may block the QS system of Pseudomonas aeruginosa with the mechanism of reducing biofilm formation and virulence factor secretion.Citation132 Talaroketals A 240 and B 241 display modest antimicrobial activity against Staphylococcus aureus with an IC50 value around 50 μg mL−1 but no activity against the other bacterial strains:Staphylococcus haemolyticus, Escherichia coli and E. faecalis.Citation87 The antimicrobial activity of bacillisporin H 263 was evaluated against a panel of human pathogenic bacteria: Escherichia coli (ATCC 8739), Staphylococcus aureus (ATCC 6538), Staphylococcus hemolyticus (MNHN26), and Enterococcus faecalis (CIP 103014). Also of note is the effect of compound 263 against Staphylococcus aureus with a MIC value of 5.0 µM.Citation90 Compound 533 exhibited moderate antifungal activity against Candida albicans (NCPF3153), flucytosine-resistant Cryptococcus neoformans (ATCC90113) and Penicillium marnefeii with the MIC values of 16, 8 and 16 μg/mL, respectively.Citation115 Compound 107 exhibited inhibitory efficacy to Bacillus subtilis CMCC63501 and Bacillus pumilus CMCC63202 with IC50 value of 18.1 and 23.8 μM, respectivelyCitation54 The antibacterial activities of Penicilones B-D 354356 were evaluated with Gram-positive S. aureus (ATCC 43300), S. aureus (ATCC 33591), S. aureus (ATCC 29213), S. aureus (ATCC 25923), Enterococcus faecalis (ATCC 51299), E. faecium (ATCC 35667), and Gram-negative Escherichia coli (ATCC 25922). The results indicated that 354356 showed significant antibacterial activities against the tested Gram-positive bacteria including both antibiotic-resistant and -susceptible strains with MIC values ranging from 3.13 to 12.5 μg/mL, while none of the tested compounds exhibited activity against E. coli.Citation121 The antibacterial activities of talaraculone B 358 against three Gram-positive bacteria and three Gram-negative bacteria were tested. It showed selective activities against the pathogenic bacteria Vibrio anguillarum, with the same MIC values of 0.26 μg/mL, stronger than the positive control ciprofloxacin (MIC = 0.52 μg/mL).Citation122 When the compound was 50 μg on the antibacterial paper (Ø 6 mm), compound 468 showed strong antibacterial activities against Escherichia coli, Bacillus subtilis and Staphylococcus aureus such as the positive control ampicillin.Citation146 Compound 160 showed antibacterial activity toward Bacillus cereus (IC50=49 μg/mL, IC90 =111 μg/mL) and Bacillus subtilis (IC50=10 μg/mL, IC90=85 μg/mL) [191]. Libertellenone M 140 exhibited antibacterial activity against Escherichia coli (ATCC 25922), Staphylococcus aureus (ATCC 27217), and Vibrio vulnificus (ATCC 27562) with MIC values of 32, 32, and 16 μg/mL, respectively.Citation62 Compound 285 displayed antifungal activity against Cryptococcus neoformans ATCC90112 and ATCC90113 flucytosine-resistant with the MIC values of 128 and 64 μg/mL, respectively.Citation101 11-Hydroxychevalone E 300 showed weak antibacterial activity against Escherichia coli and Salmonella enterica serovar Typhimurium., both with MIC 128 μg/mL.Citation40 Membrane active compound PA3-d10 431 produced by Aspergillus flavus strain demonstrated antimicrobial activities against bacteria and yeast strains.Citation139 Compounds 346 and 347 showed moderate to strong inhibitory activity against the tested Gram-positive bacteria. It is worth noting that 347 and 238 displayed potent antibacterial activities against methicillin-resistant Staphylococcus aureus ATCC 33591 with the same MIC value of 3.13 μg/mL, which was close to the positive control vancomycin (MIC 1.56 μg/mL).Citation86 Compounds 372 and 371 both displayed antimicrobial activities against Staphylococcus aureus with MIC values of 25 and 75µg/mL, respectively. Moreover, morphological observation showed the coccoid cells of S. aureus to be swollen to a volume of 1.4 and 1.7-fold after treatment with compounds 371 and 372, respectively. Microbial filamentous temperature-sensitive protein Z (FtsZ) is a novel target for drug discovery, which plays a key role in cell division. The inhibitors of FtsZ prevent the cellular fusion of bacteria, which lead to apoptosis of bacteria. Molecular docking was carried out to investigate interactions of filamentous temperature-sensitive protein Z (FtsZ) with compounds 371 and 372. The results indicated that compounds 372 might form lower potential energies and more stable binding sites with the target protein FtsZ compared to compound 371 which validated the observed antimicrobial activities.Citation126 MIC values of 200 μg/mL were obtained for compounds 472473 towards Staphylococcus aureus and Escherichia coli using the micro-broth dilution method.Citation116 Peninaphones A-C (301303) showed antibacterial activity against Staphylococcus aureus. Compound 303 exhibited significant activity against the rice sheath blight pathogen Rhizoctonia solani.Citation105 Compounds 308 and 309 displayed moderate inhibitory effects on Staphylococcus aureus and Bacillus cereus with an inhibition rate of more than 50%. Additionally, compounds 307309 showed weak antibacterial effects on MR Staphylococcus aureus.Citation109 Compounds 38 and 45 displayed significant antimicrobial activities. Compound 38 showed obvious inhibitory activities against seven pathogenic fungi (Alteranira f ragariae, Corynespora cassiicola, Alternaria alternata, Botrytis cinereal Pers., Cercospora personata, Verticillium dahliae Kleb, Sclerotinia sclerotiorum) with MIC values of 6.25–25 μg/mL (ketoconazole: 0.78–1.56 μg/mL), and compounds 3847 except for 45 were active against A. fragariae with MIC values of 6.25–50 μg/mL (ketoconazole: 0.78 μg/mL). Compounds 3847 were also evaluated for their antibacterial activity toward Gram-positive and Gram-negative human pathogenic bacterial strains. The results indicated that compound 45 was active against all tested bacteria and compound 38 was active against Bacillus cereus and methicillin-resistant Staphylococcus aureus. Moreover, compound 39 exhibited weak activity against methicillin-resistant S. aureus.Citation25 Compound 373 exhibited potent antimicrobial activities against Staphylococcus aureus with MIC values of 2.3 μg mL−1 and significant growth inhibitions of 82.3 ± 3.3 against Candida albicans and of 79.2 ± 2.6 against Candida parapsilosis. Compound 373 further showed strong activity against the pathogenic bacteria Escherichia fergusonii with MIC of 3.1 μg mL−1.Citation127 Compounds 115 and 151 displayed interesting antifungal activity against Cryptococcus neoformans ATCC90113 with the respective MIC values of 8 and 4 μg/mL. Moreover, only 115 was active against C. neoformans ATCC90112 with the MIC value of 32 μg/mL.Citation55 Compounds 295297 also displayed moderate inhibitory effects on MR Staphylococcus aureus, Staphylococcus aureus and Bacillus subtilis, which could be the major anti-bacterial constituents of Cephalotrichum microsporum.Citation104 Tolypocladin K 149 displayed moderate antifungal activity against Sclerotinia sclerotiorun, Helminthosporium maydis, Botrytis cinereal Pers. and Colletotrichum acutatum Simmonds with an MIC value of 50 μg/mL.Citation64 Duclauxamide B 257 showed anti-Mycobacterium tuberculosis activity with MIC value of 12.5 μg/mL and also had anti-Bacillus cereus and anti-Staphylococcus aureus with equal MIC values of 12.5 μg/mL.Citation89 Compounds 312321 showed antimicrobial inhibitory activities against Escherichia coli, Staphylococcus aureus, and Candida albicans with MIC values ranging from 0.9 to 7.0 μg/mL, from 1.7 to 3.5 μg/mL, and from 3.3 to 7.0 μg/mL, respectively.Citation111 Compound 66 was active against Fusarium oxysporum with an MIC value of 50 μg/mL.Citation34

Anti-Inflammatory Activities

In the in vitro anti-inflammation assay, bisacremine G 181 exhibited dose-dependent inhibitory effects on the production of TNF-α, IL-6, and nitric oxide (NO) in LPS-stimulated RAW 264.7 macrophages. At 50 μM, it inhibited TNF-α, IL-6, and NO production by 80.1%, 89.4%, and 55.7%, respectively. The inhibition was comparable to that of dexamethasone (inhibition rates at 50 μM: 78.0%, 92.6%, and 62.6%, respectively).Citation70 Compounds 156158 showed inhibitory activity against NO production in BV-2 microglial cells using the Griess assay with IC50 values of 30.0 ± 1.5, 15.5 ± 0.5 and 8.8 ± 0.1μM, respectively. Indomethacin was used as a positive control (IC50 = 34.5 ± 1.2 μM).Citation66 Compounds 457459 exhibited a significant inhibitory effect on the production of nitric oxide (NO) in murine macrophages (RAW 264.7) activated by lipopolysaccharide (LPS).Citation145 Asterriquinol E 34 and asterriquinol F 35 have inhibitory effects on NO production induced by LPS in microglia cells with NG-monomethyl-L-arginine (L-NMMA) as a positive control (IC50 4.8 μM) with IC50 values of 11.3 μM and 49.7 μM respectively.Citation23 Compared with dimethyl fumarate (DMF), a potent inflammation inhibitor, compound 211 exhibited weak anti-inflammatory activity in an ANA-1 murine macrophages model.Citation75 There is experimental evidence that 138 and 139 could dose-dependently inhibit the activity of NF-κB and exhibited significantly inhibitory effects on nitric oxide (NO) production induced by lipopolysaccharide (LPS) in the murine RAW 264.7 macrophage cells.Citation61 Myrochromanols A 396 and C 398 inhibited lipopolysaccharide (LPS)-induced NO production in BV2 cells with IC50 values of 26.04 and 25.80 μM, respectively.Citation130

Antioxidant Activities

Compounds 323, 324 and 399 showed radical scavenging activity against DPPH with IC50 values of 38.9, 42.7, and 87.5 μM, respectively.Citation11

(E)-4-hydroxy-3-[(4-hydroxy-3-methylbut-2-en-1-yl)oxy] benzoic acid 367 showed radical scavenging activity against DPPH with IC50 value of 0.51 mg/mL.Citation96 Compound 305 exhibited potent DPPH radical scavenging activities with IC50 value of 1.23μg/mL.Citation107 Pochoniolides A 469 and B 470 showed hydroxyl radical-scavenging and singlet oxygen-quenching activities. Quercetin, pochoniolides A 469 and B 470 all showed scavenging activity against ·OH as well as a quenching effect on O2. The detected values of ·OH and O2 were suppressed by 6.7% and 4.3% in quercetin, 7.9% and 3.1% in pochoniolide A, and 1.2% and 0.5% in pochoniolide B, with being assumed that 100% generation represented a negative control.Citation147 Trichothioneic acid 92 exhibited hydroxyl radical-scavenging and singlet oxygen-quenching activities.Citation47 Compounds 545546 displayed radical-scavenging activity against 2,2-diphenyl-1-picrylhydrazyl free radicals with the IC50 values of 3.45 ± 0.02, 23.73 ± 0.08 μM, respectively. Compounds (±)-385, 387 exhibited potent antioxidant capacity with oxygen radical absorbance capacity values of 1.73 ± 0.13, 1.65 ± 0.03 μmol TE/μmol, respectively. Compounds (±)-385 and (±)-386 also exhibited protective effects on oxidative injury of PC12 cells induced by H2O2.Citation128

Antiviral Activities

Isoaspulvinone E 450 showed significant anti-influenza A H1N1 virus activities, with IC50 value of 32.3 μg/mL.Citation143 When compared with ribavirin (IC50 113.1 μM), compounds 1012 and 1415 exhibited significant protection against H1N1 virus-induced cytopathogenicity in MDCK cells with IC50 values of 28.3, 38.9, 32.2, 73.3, 34.1 μM, respectively.Citation17 Ochraceopone A 102 and isoasteltoxin 363 exhibited antiviral activities against the H1N1 and H3N2 influenza viruses with IC50 values of >20.0/12.2 ± 4.10 and 0.23 ± 0.05/0.66 ± 0.09 μM, respectively. It was noteworthy that the selectivity indexes (SI) of anti-H1N1 activity of 363 was 2.35.Citation53 Compounds 280 and 281 exhibited anti-H1N1 activity with IC50 values of 133.4, 44.6, respectively (ribavirin was used as the positive control, IC50 101.4 μM). They also showed a strong anti-HSV-1 activity with IC50 values of 55.5and 21.4 μM, respectively, compared with the positive control (acyclovir, IC50 150.2 μM). Compound 281 also possessed a strong anti-HSV-2 effect with IC50 value of 76.7 μM (acyclovir as the positive control, IC50 128.6 μM), respectively.Citation100

Antimalarial Activities

Compound 17 was tested for antimalarial activity against the parasite Plasmodium falciparum (K1, multidrug resistant strain), and it showed weak antimalarial activity with an IC50 value of 16.7 μM.Citation18 Solaninaphthoquione 429 displayed weak antimalarial activity (IC50 of 26.1 μM).Citation138 Penicilleremophilane A 99 was approximately half as active against Plasmodium falciparum with the IC50 value of 3.45 μM.Citation51 Oxisterigmatocystin E 276 showed antimalarial activity against Plasmodium falciparum with IC50 value of 7.9 μM.Citation98 Macrosporusone B 251 exhibited antimalarial activity against Plasmodium falciparum with IC50 values of 10.28 μM.Citation88

Immunosuppressive Activities

Isochaetomium A2 351, compound 351 showed obvious inhibitory effects on mouse spleen cell proliferation with successive IC50 values of 0.52 μM.Citation120 Compounds 481 and 482 exhibited significant inhibition of ConA-induced T-cell proliferation, with IC50 values of 4.1 and 1.9 μM, and LPS-induced B-cell proliferation with IC50 values of 9.8 and 1.1 μM, respectively. Compounds 484, 485, and 488 exhibited selective immunosuppressive effects toward the LPS-induced B-cell proliferation with IC50 values ranging from 5.5 to 21.9 μM.Citation151 The bioactivity assays revealed that compounds 165, 166, 169, 170, and 173 exhibited a significant immunosuppressive effect against concanavalin A (ConA)-induced T lymphocyte proliferation with IC50 values ranging from 5.6 to 8.8 μM.Citation69 The immunosuppressive activity assay revealed that compounds 188, 189, and 193196 showed significant inhibitory activity against concanavalin A (ConA)-induced T lymphocyte proliferation with IC50 values ranging from 4.1 to 9.4 μM.Citation72 In the immunosuppressive activity assay, compounds 201202 showed potent inhibitory activity against concanavalin A (ConA)-induced T lymphocyte proliferation with IC50 values of 78.3, 81.1 nmol/L, respectively, which provided promising leads for designing and developing new immunosuppressive agents to treat auto-immunological diseases.Citation73

Other Activities

Paecilomide 90 was evaluated for acetylcholinesterase inhibition, presenting 57.5±5.50% of acetylcholinesterase inhibition.Citation45 Compound 217 was evaluated using in vitro binding assays of opioid receptors (subtypes δ, κ, and μ) and cannabinoid receptors (CB1 and CB2). Compound 217 selectively inhibited 42% of the specific binding of [3H]-DAMGO to CHO-K1 cell membranes expressing human μ-opioid receptors at 10 μM.Citation79 For antiacetylcholinesterase activity, Mangrovamide C 24 showed moderate acetylcholinesterase inhibitory effect with an IC50 value of 58.0 μM.Citation19 Compounds 222 and 223 were found to inhibit the conidial germination in the rice blast fungus Magnaporthe oryzae at concentrations of 25 μg/mL, 50 μg/mL, respectively.Citation81 Talacoumarins A 400 and B 401 had moderate anti-Aβ42 aggregation activity, with relative inhibitory rates of (49.33 ± 3.16)% and (44.99 ± 3.64)% [the positive control EGCG had a relative inhibitory rate of (67.23 ± 2.51)%] at the concentration of 100 μM, and this is the first report on the Aβ42 inhibitory aggregation activity of coumarins.Citation131 In the brine shrimp lethality assay, rubrumazine B 26 exhibited potent activity, with LD50 value of 2.43 μM, Compounds 25, 27 displayed modest activities, with LD50 values of 29.8 and 16.5 μM.Citation20 Compound 523 exhibited the most potent activity against HMG-CoA reductase, with an IC50 value of 387 μM. In addition, the present study indicated the direct interaction of compound 523 with HMG-CoA reductase.Citation160 Talaraculones A and B (357 and 358) exhibited stronger inhibitory activity against α-glucosidase than the positive control acarbose (IC50 = 101.5 μM), with IC50 values of 78.6 and 22.9 μM, respectively.Citation122 Aspereusin A 526 was active against acetylcholinesterase (AchE) with a ratio of 62% at the concentration of 50 μM.Citation93 (–) Benzomalvins E 80 enhanced the cytotoxic capability of 5-fluorouracil against A549 on a different level.Citation39 Compounds 142, 145, and 146 showed comparable seed-germination-promoting activities to that previously reported for the growth regulator cotylenin E.Citation63 Exophiarin 422 has been evaluated by glucose uptake assay (GUA) using L6 skeletal muscle cells (myotubes), which takes up glucose for its metabolic activities through the glucose transporter protein, GLUT4. And exophiarin 422 with TPI-2 and TPI-5 have displayed moderate improvement in glucose uptake activity when tested in rat skeletal muscle cell line L6.Citation135 Compound 478 dose-dependently inhibited bone morphogenetic protein–induced alkaline phosphatase activity in myoblasts with half-maximal inhibitory concentration values of 19.8 µM.Citation150 Compounds 206210 could inhibit the hepatic glucose production with EC50 values of 17.6, 30.1, 21.3, 9.6, and 9.9 μM, respectively, and decrease the cAMP contents in glucagon-induced HepG2 cells.Citation74

Concluding Remarks and Discussion

Based on the above literature, as mentioned above, we analyzed the classification of these new compounds and the proportion of different types of these new compounds. From the analysis data, 279 of the 546 new compounds are active. In these activity categories, anticancer and antimicrobial active compounds accounted for a large proportion, 36.2% and 30.8%, respectively (). From the strain sources of these new compounds, Aspergillus, Penicillium and Talaromyces accounted for the majority, accounting for about 56%. We also classified and analyzed the compounds from different strains, as illustrated in . In addition, we also analyzed the habitats of these source strains. Compared with special habitats, such as alpinc, polar regions, oceans, etc., most of the strains are from non-extreme living environments (66.9%) and rhizosphere soil (21.8%) (). We also made an interesting analysis to analyze the proportion of different compounds in the same activity, for example, among the 86 compounds with antimicrobial activity, there are 44 ketone compounds, accounting for about 51%. Among the compounds with immunosuppressive activity, terpenes and steroids accounted for about 68% ().

Figure 9 The percentage of compounds with various activities.

Figure 9 The percentage of compounds with various activities.

Figure 10 The number of various compounds from each genus.

Figure 10 The number of various compounds from each genus.

Figure 11 Proportion of strains in different living environments.

Figure 11 Proportion of strains in different living environments.

Figure 12 Number of different compounds with different activities.

Figure 12 Number of different compounds with different activities.

In this review, we summarized 546 new compounds derived from soil fungi, classified them according to their structures, and classified their activities, including anticancer, antimicrobial, anti-inflammatory, antioxidant, antiviral, antimalaria, and immunosuppressive activities. From the 546 new compounds from soil fungi and their activities summarized in this review since 2011, it is noteworthy that among these active compounds, anticancer and antimicrobial activities account for almost 51%. In order to facilitate readers’ understanding, we have made a table In this table, readers can more clearly and simply understand the microbial sources, biological activities, habitats of microbial sources, and relevant references of these new compounds. All information about the new compounds are briefly summarized in . It may provide a lot of help for future drug research and development. Microorganisms have provided abundant sources of natural products, which have been developed as commercial products for human medicine, animal health, and plant crop protection.Citation167 Fungi are an ideal source for obtaining novel skeletons through large-scale culture: compared with plants, fungi can proliferate rapidly from small amounts of spores to a mass of branching hyphaes, which are more environmentally friendly than collecting plant materials; compared with bacteria, fungi can be cultured in a solid medium for a longer time. Specifically, a large-scale culture can produce unexpected rearrangements and combinatorial chemistry, which serve as “dark tunnels” to novel scaffolds.Citation9 Artifacts are formed during isolation/purification of natural products. Factors such as pH, temperature, light, oxygen, humidity, and metal ions can lead to structural changes. Specific examples have been discussed in detail in a recent review on the formation of natural-product artifacts.Citation168 Artifacts are often intentionally or unintentionally overlooked, but in large-scale culture it is an issue that cannot be ignored. Extensive separation of large-scale extracts exposes natural products to longer expose to solvents, heat, air, light, and pH variations during extraction, partitioning, chromatography and drying.Citation9 The change of these external factors will inevitably affect the metabolism of microorganisms and the change of compound structure. Therefore, one problem arising from the use of large-scale cultivation of fungi is how to obtain stable access to those minor metabolites with novel skeletons. This may need to be solved in combination with chemical synthesis. Another problem is the habitat source of the strains. In this review, we analyzed the habitats of the strains involved. Although most of the strains come from non-extreme habitats, we still expect to obtain fungal strains from some extreme habitats. The extremobiosphere encompasses a broad range of biomes that include hyperarid deserts, deep-sea sediments and permafrost soils, as well as acid and high-temperature environments. Such extreme habitats are characterized by combinations of environmental variables, such as anoxia, aridity, extreme temperatures, low concentrations of organic matter, high salinity and intense irradiation. The search for new bioactive compounds from the extremobiosphere rests on the premise that harsh abiotic conditions select for novel microorganisms that express new chemistry.Citation169 In order to adapt to extreme habitats, the strains are bound to adjust their metabolism, and new secondary metabolites will increase in this process, we may get some compounds with good biological activity.

Table 1 Brief Summary of New Compounds

Disclosure

The authors report no conflicts of interest in this work.

Acknowledgments

We thank the authors of all the references cited herein for their valuable contributions. This work was supported by grants from the National Major Scientific and Technological Special Project for “Food Safety” (No. 2019YFC1604604).”

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