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Abstract

74 Novel geometric approaches to uniquely characterize DNA-binding interfaces

Pages 47-48 | Published online: 29 May 2013

References

  • Budowski-Tal , I. , Nov , Y. and Kolodny , R. 2010 . FragBag, an accurate representation of protein structure, retrieves structural neighbors from the entire PDB quickly and accurately . PNAS , 107 : 3481 – 3486 .
  • Shazman , S. , Celniker , G. , Haber , O. , Glaser , F. and Mandel-Gutfreund , Y. 2007 . Patch Finder Plus (PFplus): a web server for extracting and displaying positive electrostatic patches on protein surfaces . Nucleic Acids Research , 35 : W526 – W530 .
  • Shazman , S. , Elber , G. and Mandel-Gutfreund , Y. 2011 . From face to interface recognition: a differential geometric approach to distinguish DNA from RNA binding surfaces . Nucleic Acids Research , 39 : 7390
  • Stawiski , E. W. , Gregoret , L. M. and Mandel-Gutfreund , Y. 2003 . Annotating nucleic acid-binding function based on protein structure . Journal of Molecular Biology , 326 : 1065 – 1079 .

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