Evaluation of a Fast Method Based on the Presence of Two Restriction Sites in the Mitochondrial ND5 (mt ND5) Gene for the Identification of Scomber Species

References

• Anonymous. 2007. Manual determination of fish species Scomber http://www.famic.go.jp/technical_information/hinpyou/pdf/saba-manual.pdf (http://www.famic.go.jp/technical_information/hinpyou/pdf/saba-manual.pdf) (Accessed: from ).
   Google Scholar
• Bartlett , S. E. and Davidson , W. S. 1992 . FINS (Forensically informative nucleotide sequencing): A procedure for identifying the animal origin of biological specimens . Biotechniques , 12 : 408 – 411 .
   PubMed Web of Science ®Google Scholar
• BOE . 2010 . Resolución de 24 de marzo de 2010, de la Secretaría General del Mar, por la que se establece y se publica el listado de denominaciones comerciales de especies pesqueras y de acuicultura admitidas en España , 31242 – 31265 . Madrid , , Spain : Ministerio de Medio Ambiente, Medio Rural y Marino . Boletín Oficial del Estado Núm. 82 Lunes 5 de abril de 2010 Sec. III. Pág.
   Google Scholar
• Botti , S. and Guiffra , E. 2010 . Oligonucleotide indexing of DNA barcodes: Identification of tuna and other scombrid species in food species . BMC Biotechnol. , 10 : 60
   PubMed Web of Science ®Google Scholar
• Burgener , M. 1997 . Molecular species differentiation of fish and mammals , Switzerland : Doctoral dissertation, University of Bern .
   Google Scholar
• Catanese , C. , Manchado , M. and Infante , C. 2010a . Evolutionary relatedness of mackerels of the genus Scomber based on complete mitochondrial genomes: Strong support to the recognition of Atlantic Scomber colias and Pacific Scomber japonicus as distinct species . Gene , 45 : 35 – 43 .
   Web of Science ®Google Scholar
• Catanese , G. , Manchado , M. , Fernandez-Trujillo , A. and Infante , C. 2010b . A multiplex-PCR assay for the authentication of mackerels of the genus Scomber in processed fish products . Food Chem. , 122 : 319 – 326 .
   Web of Science ®Google Scholar
• Espiñeira , M. , González-Lavín , N. , Vieites , J. M. and Santaclara , F. J. 2009 . Development of a method for the identification of scombroid and common substitute species in seafood products by FINS . Food Chem. , 117 : 698 – 704 .
   Web of Science ®Google Scholar
• Felsestein , J. 1985 . Confidence limits on phylogenies: An approach using the bootstrap . Evolution , 39 : 783 – 791 .
   PubMed Web of Science ®Google Scholar
• Forås , E. and Thakur , M. 2010 . Documentation of Norwegian Mackerel Cold Chain During Storage and Transport Between Norway and Japan (SINTEF Report A18062) , Trondheim, Norway : SINTEF .
   Google Scholar
• Hall , T. A. 1999 . BIOEDIT: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT . Nucleic Acids Symposium Series , 41 : 95 – 98 .
   Google Scholar
• Infante , C. , Blanco , E. , Zuasti , E. , Crespo , A. and Manchado , M. 2007 . Phylogenetic differentiation between Atlantic Scomber colias and Pacific Scomber japonicus based on nuclear DNA sequences . Genetica , 130 : 1 – 8 .
   PubMed Web of Science ®Google Scholar
• Kocher , T. D. , Thomas , W. K. , Meyer , A. , Edwards , S. V. , Paado , S. , Villablanca , F. X. and Wilson , A. C. 1989 . Dynamics of mitochondrial DNA evolution in animals: Amplification and sequencing with conserved primers . P. Natl. Acad. Sci. USA. , 86 : 6196 – 6200 .
   PubMed Web of Science ®Google Scholar
• Mackie , I. M. , Pryde , S. E. , González Sotelo , C. , Medina , I. , Pérez-Martín , R. I. , Quinteiro , J. , Rey-Méndez , M. and Rehbein , H. 1999 . Challenges in the identification of species of canned fish . Trends Food Sci. Technol. , 10 : 9 – 14 .
   Web of Science ®Google Scholar
• Martinez , I. , Aursand , M. , Erikson , U. , Singstad , T. E. , Veliyulin , E. and van der Zwaag , C. 2003 . Destructive and non-destructive analytical techniques for authentication and composition analyses of foodstuffs . Trends Food Sci. Technol. , 14 : 489 – 498 .
   Web of Science ®Google Scholar
• Matsui , T. 1967 . Review of the mackerel genera Scomber and Rastrelliger with description of a new species of Rastrelliger . Copeia , 7 : 1 – 83 .
   Google Scholar
• Meyer , A. 1993 . “ Evolution of mitochondrial DNA in fishes ” . In Biochemistry and Molecular Biology of Fishes , Edited by: Hochachka , P. W. and Mommsem , T. P. Vol. 2 , 1 – 38 . Amsterdam , , The Netherlands : Elsevier Science .
   Google Scholar
• Nesbø , C. L. , Rueness , E. K. , Iversen , S. A. , Skagen , D. W. and Jakobsen , K. S. 2000 . Phylogeography and population history of Atlantic mackerel (Scomber scombrus L.): A genealogical approach reveals genetic structuring among the eastern Atlantic stocks . P. Roy. Soc. Lond. B. Bio. , 267 : 281 – 292 .
   Web of Science ®Google Scholar
• Quinteiro , J. , Sotelo , C. G. , Rehbein , H. , Pryde , S. E. , Medina , I. , Perez-Martin , R. I. , Rey-Mendez , M. and Mackie , I. M. 1998 . Use of mtDNA direct polymerase chain reaction (PCR) sequencing and PCR-restriction fragment length polymorphism methodologies in species identification of canned tuna . J. Agric. Food Chem. , 46 : 1662 – 1669 .
   Web of Science ®Google Scholar
• Saitou , N. and Nei , M. 1987 . The neighbor-joining method: A new method for reconstruction of phylogenetic trees . Mol. Biol. Evol. , 4 : 406 – 425 .
   PubMed Web of Science ®Google Scholar
• Sotelo , C. G. and Pérez-Martín , R. I. 2007 . “ Fish and seafood authentication ” . In Authentication of Food and Wine (ACS Symposium Series 952) , Edited by: Ebeler , S. E. , Takeoka , G. and Winterhalter , P. 126 – 137 . New York , NY : Oxford University Press .
   Google Scholar
• Tamura , K. and Nei , M. 1993 . Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpazees . Mol Biol. Evol. , 10 : 512 – 526 .
   PubMed Web of Science ®Google Scholar
• Tamura , K. , Dudley , J. , Nei , M. and Kumar , S. 2007 . MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0 . Mol. Biol. Evol. , 24 : 1596 – 1599 .
   PubMed Web of Science ®Google Scholar
• Thakur , M. , Sørensen , C. F. , Bjørnson , F. O. , Forås , E. and Hurburgh , C. R. 2011 . Managing food traceability information using EPCIS framework . J. Food Eng. , 103 : 417 – 433 .
   Web of Science ®Google Scholar
• Thompson , J. D. , Higgins , D. G. and Gibson , T. J. 1994 . CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice . NAR. , 22 : 4673 – 4680 .
   PubMed Web of Science ®Google Scholar