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Plant-Microorganism Interactions

Plant-PGPR interaction study of plant growth-promoting diazotrophs Kosakonia radicincitans BA1 and Stenotrophomonas maltophilia COA2 to enhance growth and stress-related gene expression in Saccharum spp.

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Pages 427-445 | Received 17 Sep 2020, Accepted 23 Nov 2020, Published online: 14 Dec 2020

References

  • Ahmad F, Ahmad I, Khan MS. 2008. Screening of free-living rhizospheric bacteria for their multiple plant growth promoting activities. Microbiol Res. 163:173–181.
  • Akter Z, Pageni BB, Lupwayi NZ, Balasubramanian PM. 2014. Biological nitrogen fixation and nifH gene expression in dry beans Phaseolus vulgaris L. Can J Plant Sci. 94:203–212.
  • Alexander A, Singh VK, Mishra A, Jha B. 2019. Plant growth promoting rhizobacterium Stenotrophomonas maltophilia BJ01 augments endurance against N2 starvation by modulating physiology and biochemical activities of Arachis hypogea. PLoS ONE. 149:e0222405.
  • Arora NK, Tewari S, Singh R. 2013. Multifaceted plant-associated microbes and their mechanisms diminish the concept of direct and indirect PGPRs. In: NK Arora, editor. Plant microbe symbiosis; Fundamentals and advances. Springer; p. 411–449.
  • Asis CA, Kubota M, Ohta H, Arima Y, Ohwaki Y, Yoneyama T, Tsuchiya K, Hayashi N, Nakanishi Y, Akao S. 2002. Estimation of the nitrogen fixation by sugarcane cultivar NiF-8 using 15N dilution and natural 15N abundance techniques. J Soil Sci Plant Nutr. 48(2):283–285.
  • Baldani JI. 1984. Ocorrênciae caracterização de Azospirillum amazonense em comparação com outras espécies deste gênero em raízes de milho sorgo e arroz, Federal Rural University of Rio de Janeiro Seropédica RJ Brazil. MSc Thesis.
  • Baldani JI, Baldani VLD. 2005. History on the biological nitrogen fixation research in graminaceous plants: special emphasis on the Brazilian experience. An Acad Bras Cienc. 77:549–579.
  • Baldani VLD, Baldani JI, Olivares FL, Döbereiner J. 1992. Identification and ecology of Herbaspirillum seropedicae and the closely related Pseudomonas rubrisubalbicans. Symbiosis. 13:65–73.
  • Belbahri L, Chenari Bouket A, Rekik I, Alenezi FN, Vallat A, Luptakova L, Petrovova E, Oszako T, Cherrad S, Vacher S, Rateb ME. 2017. Comparative genomics of Bacillus amyloliquefaciens strains reveals a core genome with traits for habitat adaptation and a secondary metabolites rich accessory genome. Front Microbiol. 8:1438.
  • Benito P, Alonso-Vega P, Aguado C, Luján R, Anzai Y, Hirsch AM, Trujillo ME. 2017. Monitoring the colonization and infection of legume nodules by Micromonospora in co-inoculation experiments with rhizobia. Sci Rep. 7:11051.
  • Berger B, Patz S, Ruppel S, Dietel K, Faetke S, Junge H, Becker M. 2018. Successful formulation and application of plant growth-promoting Kosakonia radicincitans in maize cultivation. Biomed Res Int. 6439481:8. doi:10.1155/2018/6439481.
  • Bharti N, Barnawal D. 2018. Amelioration of salinity stress by PGPR: ACC deaminase and ROS scavenging enzymes activity. In: Singh AK, Kumar A, Singh PK, editors. PGPR Amelioration in sustainable Agriculture: Food Security and environmental management. Woodhead Publishing; p. 85–106.
  • Bharti N, Pandey SS, Barnawal D, Patel VK, Kalra A. 2016. Plant growth promoting rhizobacteria Dietzia natronolimnaea modulates the expression of stress responsive genes providing protection of wheat from salinity stress. Sci Rep. 6:34768.
  • Bhattacharyya C, Banerjee S, Acharya U, Mitra A, Mallick I, Halder A, Halder S, Ghosh A, Ghosh A. 2020. Evaluation of plant growth promotion properties and induction of antioxidative defense mechanism by tea rhizobacteria of Darjeeling India. Sci Rep. 10:15536. doi:10.1038/s41598-020-72439-z.
  • Bhattacharyya PN, Jha DK. 2012. Plant growth-promoting rhizobacteria (PGPR): emergence in agriculture. World J Microbiol Biotechnol. 28:1327–1350.
  • Boddey RM, de Oliveira OC, Urquiaga S, Reis VM, de Olivares EL, Baldani VLD, Dobereiner J. 1995. Biological nitrogen fixation associated with sugar cane and rice: Contributions and prospects for improvement. Plant Soil. 174:195–209.
  • Bradford MM. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem. 72:255-260.
  • Brown MM, Friez MJ, Lovell CR. 2003. Expression of nifH genes by diazotrophic bacteria in the rhizosphere of short form Spartina alterniflora. FEMS Microbiol Ecol. 43:411–417.
  • Bulgarelli D, Rott M, Schlaeppi K, Ver Loren van Themaat E, Ahmadinejad N, Assenza F, Rauf P, Huettel B, Reinhardt R, Schmelzer E, et al. 2012. Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota. Nature. 488(2):91–95.
  • Cakmak I, Pfeiffer WH, Clafferty BM. 2010. Biofortification of durum wheat with zinc and iron. Cereal Chem. 87(1):10–20.
  • Carvalho TLG, Balsemao-Pires E, Saraiva RM, Ferreira SG, Hemerly AS. 2014. Nitrogen signalling in plant interactions with associative and endophytic diazotrophic bacteria. J Exp Bot. 65:5631–5642. doi:10.1093/jxb/eru319.
  • Cassán F, Vanderleyden J, Spaepen S. 2014. Physiological and agronomical aspects of phytohormone production by model plant-growth-promoting rhizobacteria PGPR belonging to the genus Azospirillum. J Plant Growth Regul. 33:440–459.
  • Cavalcante VA, Döbereiner J. 1988. A new acid-tolerant nitrogen-fixing bacterium associated with sugarcane. Plant Soil. 108:23–31.
  • Chelius MK, Triplett EW. 2000. Immuno localization of dinitrogenase reductase produced by Klebsiella pneumoniae in association with Zea mays L. Appl Environ Microbiol. 66:783–787.
  • Chen HJ, Wu SD, Huang GJ, Shen CY, Afiyanti M, Li WJ, Lin YH. 2012. Expression of a cloned sweet potato catalase SPCAT1 alleviates ethephon-mediated leaf senescence and H2O2 elevation. J Plant Physiol. 169:86–97.
  • Cherif-Silini H, Silini A, Yahiaoui H, Ouzari I, Boudabous A. 2016. A phylogenetic and plant-growth-promoting characteristic of Bacillus isolated from the wheat rhizosphere. Ann Microbio. 66:1087–1097.
  • Chojniak J, Wasilkowski D, Płaza G, Mrozik A, Brigmon R. 2015. Application of biolog microarrays techniques for characterization of functional diversity of microbial community in phenolic-contaminated water. Int J Environ Res. 9:785–794.
  • Compant S, Kaplan H, Sessitsch A, Nowak J, Ait Barka E, Clément C. 2008. Endophytic colonization of Vitis vinifera L, by Burkholderia phytofirmans strain PsJN: from the rhizosphere to in florescence tissues. FEMS Microbiol Ecol. 63(1):84–93.
  • Das K, Prasanna R, Saxena AK. 2017. Rhizobia: a potential biocontrol agent for soilborne fungal pathogens. Folia Microbiol. 62(5):425–435.
  • de-Freitas JR, Banerjee MR, Germida JJ. 1997. Phosphate solubilizing rhizobacteria enhance the growth and yield but not phosphorus uptake of Canola Brassica napus L. Biol Fert Soils. 24:358–364.
  • Deng W, Wang Y, Liu Z, Cheng H, Xue Y. 2014. Hemi: a toolkit for illustrating heatmaps. PLoS ONE. 9(11):e111988.
  • De-Souza R, Ambrosini A, Passaglia LMP. 2015. Plant growth-promoting bacteria as inoculants in agricultural soils. Genet Mol Biol. 38:401–419. doi:10.1590/S1415-475738420150053.
  • Dey R, Pal K K, Bhatt D M, Chauhan S M. 2004. Growth promotion and yield enhancement of peanut Arachis hypogaea L, by application of plant growth promoting rhizobacteria. Microbiol Res. 159:371–394.
  • Dobbelaere S, Vanderleyden J, Okon Y. 2003. Plant growth promoting effects of diazotrophs in the rhizosphere. Crit Rev Plant Sci. 22:107–149.
  • Dobereiner J. 1992. History and new perspectives of diazotrophs in association with non-leguminous plants. Symbiosis. 13:1–13.
  • Döbereiner J. 1997. Biological nitrogen fixation in the tropics: social and economic contributions. Soil Biol Biochem. 29(5-6):771–774.
  • Edwards U, Rogall TH, Blocker H, Emde M, Bottger EC. 1989. Isolation and direct complete nucleotide determination of entire genes, characterization of a gene coding for 16S ribosomal RNA. Nucleic Acids Res. 17:7843–7853.
  • Etesami H, Ali HA, Hosseini HM. 2015. Indole-3-acetic acid IAA production trait a useful screening to select endophytic and rhizosphere competent bacteria for rice growth promoting agents. MethodsX. 2:72–78.
  • FAO. 2018. Top sugarcane production: Food and Agriculture Organization of the United Nations Rome: FAO.
  • Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution. 39:783–791.
  • Fukami J, Ollero F J, Megías M, Hungria M. 2017. Phytohormones and induction of plant-stress tolerance and defense genes by seed and foliar inoculation with Azospirillum brasilense cells and metabolites promote maize growth. AMB Express. 7(1):153.
  • Gaiero JR, McCall CA, Thompson KA, Day NJ, Best AS, Dunfield KE. 2013. Inside the root microbiome: bacterial root endophytes and plant growth promotion. Am J Bot. 100:1738–1750.
  • Glick BR, Todorovic B, Czarny J, Cheng Z, Duan J, McConkey B. 2007. Promotion of plant growth by bacterial ACC deaminase. Crit Rev Plant Sci. 26:227–242.
  • Glickmann E, Dessaux Y. 1995. A critical examination of the specificity of the Salkowski reagent for indolic compounds produced by phytopathogenic bacteria. Appl Environ Microbiol. 61:793–796.
  • Guo D-J, Singh RK, Singh P, Li D-P, Sharma A, Xing Y-X, Song X-P, Yang L-T, Li Y-R. 2020. Complete genome sequence of Enterobacter roggenkampii ed5 a nitrogen fixing plant growth promoting endophytic bacterium with biocontrol and stress tolerance properties isolated from sugarcane root. Front Microbiol. 11:580081. doi:10.3389/fmicb.2020.580081.
  • Hacquard S, Spaepen S, Garrido-Oter R, Schulze-Lefert P. 2017. Interplay between innate immunity and the plant microbiota. Annu Rev Phytopathol. 55(1):565–589.
  • Han J, Sun L, Dong X, Cai Z, Sun X, Yang H, Wang Y, Song W. 2005. Characterization of a novel plant growth-promoting bacteria strain Delftia tsuruhatensis HR4 both as a diazotroph and a potential biocontrol agent against various plant pathogens. Syst Appl Microbiol. 28(1):66–76.
  • Hardy RWF, Holsten RD, Jackson EK, Burns RC. 1968. The acetylene ethylene assay for N2 fixation: laboratory and field evaluation. Plant Physiol. 43:1185–1207.
  • Hayat R, Ali S, Amara U, Khalid R, Ahmed I. 2010. Soil beneficial bacteria and their role in plant growth promotion: a review. Ann Microbiol. 60:579–598.
  • Honma M, Shimomura T. 1978. Metabolism of 1-aminocyclopropane-1-carboxylic acid. Agric Biol Chem. 42:1825–1831.
  • Jacobson CB, Pasternak JJ, Glick BR. 1994. Partial purification and characterization of 1-aminocyclopropane-1-carboxylate deaminase from the plant growth promoting rhizobacterium Pseudomonas putida GR12-2. Can J Microbiol. 40:1019–1025.
  • Jain R, Chandra A, Venugopalan VK, Solomon S. 2015. Physiological changes and expression of SOD and P5CS genes in response to water deficit in sugarcane. Sugar Tech. 17:276–282.
  • Jooste M, Roets F, Midgley GF, Oberlander KC, Dreyer LL. 2019. Nitrogen-fixing bacteria and Oxalis –evidence for a vertically inherited bacterial symbiosis. BMC Plant Biol. 19:441. doi:10.1186/s12870-019-2049-7.
  • Kang SH, Cho HS, Cheong H, Ryu CM, Kim JF, Park SH. 2007. Two bacterial entophytes eliciting both plant growth promotion and plant defense on Pepper Capsicum annuum L. J Microbiol Biotechnol. 17(1):96–103.
  • Krey T, Baum C, Ruppes L, Seydel M, Eichler Lobermann B. 2013. Organic and inorganic P sources interacting with applied rhizosphere bacteria and their effects on growth and P supply of maize. Commun Soil Sci Plan. 44(22):3205–3215.
  • Kumar S, Stecher G, Tamura K. 2016. MEGA7: molecular evolutionary genetics analysis version 7,0 for bigger datasets. Mol Biol Evol. 33:1870–1874.
  • Kumar V, Singh KP. 2001. Enriching vermicompost by nitrogen fixing and phosphate solubilizing bacteria. Bioresour Tech. 76:173–175.
  • Lavakusha JY, Verma JP, Jaiswal DK, Kumar A. 2014. Evaluation of PGPR and different concentration of phosphorus level on plant growth: yield and nutrient content of rice Oryza sativa. Ecol Eng. 62:123–128.
  • Lebeis SL. 2014. The potential for give and take in plant-microbiome relationships. Front Plant Sci. 5:287.
  • Li HB, Singh RK, Singh P, Song QQ, Xing YX, Yang LT, Li YR. 2017. Genetic diversity of nitrogen-fixing and plant growth promoting pseudomonas species isolated from sugarcane rhizosphere. Front Microbiol. 8:1268.
  • Li YR, Zhou XZ, Yang LT. 2015. Biological nitrogen fixation in sugarcane and nitrogen transfer from sugarcane to cassava in an intercropping system. Inter J Sci Nature. 6:214–218.
  • Lin L, Guo W, Xing Y, Zhang X, Li Z, Hu C, Li S, Li Y, An Q. 2012. The actinobacterium Microbacterium sp, 16SH accepts pBBR1-based pPROBE vectors forms biofilms invades roots and fixes N2 associate d with micropropagated sugarcane plants. Appl Microbiol Biotechnol. 93:1185–1195.
  • Livak KJ, Schmittgen TD. 2001. Analysis of relative gene expression data using real-time quantitative PCR and the 2−11Ct method. Methods. 25:402–408.
  • Loiret FG, Ortega E, Kleiner D, Ortega-Rodés P, Rodés R, Dong Z. 2004. A putative new endophytic nitrogen-fixing bacterium Pantoea sp. from sugarcane. J Appl Microbiol. 97:504–511.
  • Lorck H. 1948. Production of hydrocyanic acid by bacteria. Physiol Plant. 1:142–146.
  • Mazur A, Stasiak G, Wielbo J, Koper P, Kubik-Komar A, Skorupsk A. 2013. Phenotype profiling of Rhizobium leguminosarum bv, trifolii clover nodule isolates reveal their both versatile and specialized metabolic capabilities. Arch Microbiol. 195:255–267.
  • Mehnaz S, Baig DN, Lazarovits G. 2010. Genetic and phenotypic diversity of plant growth promoting rhizobacteria isolated from sugarcane plants growing in Pakistan. J Microbiol Biotechnol. 20:1614–1623. doi:10.4014/jmb.1005.05014.
  • Montañez A, Abreu C, Gill PR, Hardarson G, Sicardi M. 2009. Biological nitrogen fixation in maize Zea mays L, by 15N isotope-dilution and identification of associated culturable diazotrophs. Biol Fertil Soils. 45:253–263.
  • Niu JQ, Wang AQ, Huang JL, Yang LT, Li YR. 2015. Isolation characterization and promoter analysis of cell wall invertase gene SOCIN1 from sugarcane Saccharum spp. Sugar Tech. 17:65–76.
  • Noda S, Ohkuma M, Usami R, Horikoshi K, Kudo T. 1999. Culture independent characterization of a gene responsible for nitrogen fixation in the symbiotic microbial community in the gut of the termite Neotermes koshunensis. Appl Environ Microbiol. 65:4935–4942.
  • Olanrewaju OS, Glick BR, Babalola OO. 2017. Mechanisms of action of plant growth promoting bacteria. World J Microbiol Biotechnol. 33:197.
  • Oliveira ALM, Urquiaga S, Dobereiner J, Baldani JI. 2002. The effect of inoculating endophytic N2 -fixing bacteria on micropropagated sugarcane plants. Plant Soil. 242:205–215.
  • Park M, Kim C, Yang J, Lee H, Shin W, Kim S, Sa T. 2005. Isolation and characterization of diazotrophic growth promoting bacteria from rhizosphere of agricultural crops of Korea. Microbiol Res. 160:127–133.
  • Passari AK, Mishra VK, Gupta VK, Yadav MK, Saikia R, Singh BP. 2015. In vitro and in vivo plant growth promoting activities and DNA fingerprinting of antagonistic endophytic actinomycetes associates with medicinal plants. PLoS ONE. 10:e0139468.
  • Paungfoo-Lonhienne C, Lonhienne TGA, Yeoh YK, Donose BC, Webb RI, Parsons J, Liao W, Sagulenko E, Lakshmanan P, Hugenholtz P, et al. 2016. Crosstalk between sugarcane and a plant-growth promoting Burkholderia species. Sci Rep. 6:37389.
  • Perin L, Martinez-Aguilar L, Paredes-Valdez G, Baldani JI, Estrada-de los Santos P, Reis VM, Caballero-Mellado J. 2006. Burkholderia silvatlantica sp, nov, a diazotrophic bacterium associated with sugarcane and maize. Int J Syst Evol Microbiol. 56:1931–1937.
  • Pikovskaya RI. 1948. Mobilization of phosphorus in soil in connection with the vital activity of 804 some of the microbial species. Microbiologiya. 17:362–370.
  • Poly F, Monrozier LJ, Bally R. 2001. Improvement in the RFLP procedure for studying the diversity of nifH genes in communities of nitrogen fixers in soil. Res Microbiol. 152:95–103.
  • Rafikova GF, Korshunova T, Minnebaev LF, Chetverikov SP, Loginov ON. 2016. A new bacterial strain Pseudomonas koreensis IB-4 as a promising agent for plant pathogen biological control. Microbiol. 85:333–341.
  • Reis VM, Olivares FL, de Oliveira ALM, dos Reis JFB, Baldani JI, Dobereiner J. 1998. Technical approaches to inoculate micro-propagated sugarcane plants with Acetobacter diazotrophicus. Plant Soil. 206:205–211.
  • Remus R, Ruppel S, Jacob HJ, Hecht-Buchholz C, Merbach W. 2000. Colonization behaviour of two enterobacterial strains on cereals. Biol Fert Soils. 30(5-6):550–557.
  • Robertson-Albertyn S, Alegria Terrazas R, Balbirnie K, Blank M, Janiak A, Szarejko I, Chmielewska B, Karcz J, Morris J, Hedley PE, et al. 2017. Root hair mutations displace the Barley rhizosphere microbiota. Front Plant Sci. 8:1094. doi:10.3389/fpls.2017.01094.
  • Rosado AS, Duarte GF, Seldin L, Elsas JDV. 1998. Genetic diversity of nifH gene sequences in Paenibacillus azotofixans strains and soil samples analyzed by denaturing gradient gel electrophoresis of PCR amplified gene fragments. Appl Environ Microbiol. 64:2770–2779.
  • Rosenblueth M, Martínez-Romero E. 2006. Bacterial endophytes and their interactions with hosts. Molecular Plant-Microbe Interactions®. 19:827–837.
  • Sahoo RK, Ansari MW, Dangar TK, Mohanty S, Tuteja N. 2014. Phenotypic and molecular characterisation of efficient nitrogen-fixing Azotobacter strains from rice fields for crop improvement. Protoplasma. 251:511–523.
  • Sahran BS, Nehra V. 2011. Plant growth promoting rhizobacteria: a critical review. Lif Sci Med Res. 21:1–30.
  • Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol. 4:406–425.
  • Santi C, Bogusz D, Franche C. 2013. Biological nitrogen fixation in non-legume plants. Ann Bot. 111:743–767.
  • Sarkar A, Ghosh PK, Pramanik K, Mitra S, Soren T, Pandey S, Mondal MH, Maiti TK. 2018. A halotolerant Enterobacter sp. displaying ACC deaminase activity promotes rice seedling growth under salt stress. Res Microbiol. 169:20–32.
  • Schwyn B, Neilands JB. 1987. Universal chemical assay for the detection and determination of siderophores. Anal Biochem. 160:47–56.
  • Sevilla M, Burris RH, Gunapala N, Kennedy C. 2001. Comparison of benefit to sugarcane plant growth and 15N2 incorporation following inoculation of sterile plants with Acetobacter diazotrophicus wild-type and Nif− mutant strains. Molecular Plant-Microbe Interactions®. 14:358–366.
  • Silveira APD, Sala VMR, Cardoso EJBN, Labanca EG, Cipriano MAP. 2016. Nitrogen metabolism and growth of wheat plant under diazotrophic endophytic bacteria inoculation. Appl Soil Ecol. 107:313–319.
  • Singh RK, Kumar DP, Solanki MK, Singh P, Srivastava S, Srivastva AK, Kumar S, Kashayp PL, Singhal PK, Arora DK. 2013. Multifarious plant growth promoting characteristics of chickpea rhizosphere associated Bacilli help to suppress soil-borne pathogens. Plant Growth Regul. 73:91–101.
  • Singh RK, Singh P, Li HB, Song QQ, Guo DJ, Solanki MK, Verma KK, Malviya MK, Song XP, Lakshmanan P, et al. 2020. Diversity of nitrogen fixing rhizobacteria associated with sugarcane A comprehensive study of plant-microbe interactions for growth enhancement in Saccharum spp. BMC Plant Biol. doi:10.1186/s12870-020-02400-9.
  • Singh RK, Singh P, Li HB, Yang LT, Li YR. 2017. Use of nitrogen-fixing bacteria for plant growth and development in sugarcane. In: DP Singh, et al., editors. Plant-microbe interactions in agro-ecological perspectives. Singapore: Springer Nature; 3:35–59.
  • Singh P, Song QQ, Singh RK, Li HB, Solanki MK, Malviya MK, Verma K K, Yang LT, Li YR. 2019. Proteomic analysis of the resistance mechanisms in sugarcane during Sporisorium scitamineum infection. Int J Mol Sci. 20:569. doi:10.3390/ijms20030569.
  • Singh P, Song QQ, Singh RK, Li HB, Solanki MK, Yang LT, Li YR. 2018. Physiological and molecular analysis of sugarcane varieties-F134 and NCo310 during Sporisorium scitamineum interaction. SugarTech. 21:631–644.
  • Smyth DR, Bowman JL, Meyerowitz EM. 1990. Early flower development in Arabidopsis. Plant Cell. 2:755–767.
  • Sneath PHA, Sokal RR. 1973. Numerical taxonomy. San Francisco (CA): Freeman.
  • Somers E, Vanderleyden J, Srinivasan M. 2004. Rhizosphere bacterial signalling: a love parade beneath our feet. Crit Rev Microbiol. 30:205–240.
  • Song XP, Huang X, Mo FL, Tian DD, Yang LT, Li YR, Chen BS. 2013. Cloning and expression analysis of sugarcane phenylalanine ammonia-lyase PAL gene. Sci Agric Sin. 46:2856–2868.
  • Su Y, Xu L, Fu Z, Yang Y, Guo J, Wang S, Que Y. 2014. Scchi, encoding an acidic class III chitinase of sugarcane, confers positive responses to biotic and abiotic stresses in sugarcane. Int J Mol Sci. 15:2738–2760. doi:10.3390/ijms15022738.
  • Su YC, Xu LP, Xue BT, Wu QB, Guo JL, Wu LG, Que YX. 2013. Molecular cloning 840 and characterization of two pathogenesis related ß-13-glucanase genes ScGluA1 and ScGluD1841 from sugarcane infected by Sporisorium scitamineum. Plant Cell Rep. 32:1503–1519.
  • Suckstorff I, Berg G. 2003. Evidence for dose dependent effects on plant growth by Stenotrophomonas strains from different origins. J Appl Microbiol. 95:656–663.
  • Sundar AR, Barnabas EL, Malathi P, Vishwanathan RA. 2012. Mini-review on smut disease of sugarcane caused by sporisorium scitamineum. In: J. Mworia Rijeka, editor. Botany. In Tech Publisher; p. 109–128.
  • Tamura K, Nei M, Kumar S. 2004. Prospects for inferring very large phylogenies by using the neighbor-joining method. Proc Natl Acad Sci USA. 101:11030–11035.
  • Taulé C, Mareque C, Barlocco C, Hackembruch F, Reis VM, Sicardi M, Battiston F. 2012. The contribution of nitrogen fixation to sugarcane Saccharum officinarum L, and the identification and characterization of part of the associated diazotrophic bacterial community. Plant Soil. 356:35–49. doi:10.1007/s11104-011-1023-4.
  • Timmusk S, Grantcharova N, Wagner GH. 2005. Paenibacillus polymyxa invades plant roots and forms biofilms. Appl Environ Microbiol. 71:7292–7300.
  • Urquiaga S, Cruz KHS, Boddey RM. 1992. Contribution of nitrogen fixation to sugarcane nitrogen-15 and nitrogen balance estimates. Soil Sci Soc Am Proc. 56:105–114.
  • Urquiaga S, Xavier RP, de Morais RF, Batista RB, Schultz N, Leite JM, Sa JME, Barbosa K P, de Resende AS, Alves BJR, Boddey RM. 2012. Evidence from field nitrogen balance and 15N natural abundance data for the contribution of biological N fixation to Brazilian sugarcane varieties. Plant Soil. 356:5–21.
  • Venturi V, Keel C. 2016. Signaling in the rhizosphere. Trends Plant Sci. 21(3):187–198. doi:10.1016/j.tplants.2016.01.005.
  • Verma R, Maurya BR, Meena VS, Dotaniya ML, Deewan P, Jajoria M. 2017. Enhancing production potential of cabbage and improves soil fertility status of Indo-Gangetic Plain through application of bio-organics and mineral fertilizer. Int J Curr Microbiol Appl Sci. 63:301–309.
  • Viswanathan R, Rao GP. 2011. Disease scenario and management of major sugarcane diseases in India. Sugar Tech. 13:336–353. doi:10.1007/s12355-011-0102-4.
  • Wang X, Wang Y, Tian J, Lim BL, Yan X, Liao H. 2009. Over expressing at PAP15 enhances phosphorus efficiency in soybean. Plant Physiol. 151:233–240.
  • Wielbo J, Marek-Kozaczuk M, Kubik-Komar A, Skorupska A. 2007. Increased metabolic potential of Rhizobium spp. is associated with bacterial competitiveness. Can J Microbiol. 53:957–967.
  • Wilson D. 1995. Endophyte: the evolution of a term and clarification of its use and definition. Oikos. 73(2):274–276. doi:10.2307/3545919.
  • Xing YX, Wei CY, Mo Y, Yang LT, Huang SL, Li YR. 2016. Nitrogen-Fixing and plant growth-promoting ability of Two endophytic bacterial strains isolated from sugarcane Stalks. Sugar Tech. 18(4):373–379.
  • Zahir ZA, Muhammad A, Frankenberger WTJ. 2003. Plant growth promoting rhizobacteria: applications and perspectives in agriculture. Adv Agron. 81:97–168.
  • Zehr JP, Capone DG. 1996. Problems and promises of assaying the genetic potential for nitrogen fixation in the marine environment. Microb Ecol. 32:263–281.
  • Zehr JP, Jenkins BD, Short SM, Steward GF. 2003. Nitrogenase gene diversity and microbial community structure: a cross-system comparison. Enviro Microbiol. 5:539–554.
  • Zeng Q, Wu X, Wen X. 2016. Identification and characterization of the rhizosphere phosphate-solubilizing bacterium Pseudomonas frederiksbergensis JW-SD2 and its plant growth-promoting effects on poplar seedlings. Ann Microbiol. 66:1343–1354.
  • Zewide I. 2019. Role of bio-fertilizer for maximizing productivity of selected horticultural crops. J Agri Res Adv. 0102:01–18.
  • Zhang M, Govindaraju M. 2018. Sugarcane production in China. Sugarcane-Technol Res. doi:10.5772/intechopen.3:73113.
  • Zhu B, Zhou Q, Lin L, Hu C, Shen P, Yang L, An Q, Xie G, Li Y. 2013. Enterobacter sacchari sp, nov, a nitrogen-fixing bacterium associated with sugar cane Saccharum officinarum L. Int J Syst Evol Microbiol. 63:2577–2582.