171
Views
403
CrossRef citations to date
0
Altmetric
Transcriptional Regulation

RNA Polymerase II Elongation Factors of Saccharomyces cerevisiae: a Targeted Proteomics Approach

, , , , , , , , & show all
Pages 6979-6992 | Received 20 May 2002, Accepted 16 Jul 2002, Published online: 28 Mar 2023

Keep up to date with the latest research on this topic with citation updates for this article.

Read on this site (46)

Célia Jeronimo & François Robert. (2022) The histone chaperone FACT: a guardian of chromatin structure integrity. Transcription 13:1-3, pages 16-38.
Read now
Rwik Sen, Amala Kaja, Jannatul Ferdoush, Shweta Lahudkar, Priyanka Barman & Sukesh R. Bhaumik. (2017) An mRNA Capping Enzyme Targets FACT to the Active Gene To Enhance the Engagement of RNA Polymerase II into Transcriptional Elongation. Molecular and Cellular Biology 37:13.
Read now
Qing-Fu Cao, Junichi Yamamoto, Tomoyasu Isobe, Shumpei Tateno, Yuki Murase, Yexi Chen, Hiroshi Handa & Yuki Yamaguchi. (2015) Characterization of the Human Transcription Elongation Factor Rtf1: Evidence for Nonoverlapping Functions of Rtf1 and the Paf1 Complex. Molecular and Cellular Biology 35:20, pages 3459-3470.
Read now
Pavel Čabart, Huiyan Jin, Liangtao Li & Craig D Kaplan. (2014) Activation and reactivation of the RNA polymerase II trigger loop for intrinsic RNA cleavage and catalysis. Transcription 5:3.
Read now
Suting Zheng, J. Brooks Crickard, Abhinaya Srikanth & Joseph C. Reese. (2014) A Highly Conserved Region within H2B Is Important for FACT To Act on Nucleosomes. Molecular and Cellular Biology 34:3, pages 303-314.
Read now
Wajid Bhat, Geneviève Boutin, Anne Rufiange & Amine Nourani. (2013) Casein Kinase 2 Associates with the Yeast Chromatin Reassembly Factor Spt2/Sin1 To Regulate Its Function in the Repression of Spurious Transcription. Molecular and Cellular Biology 33:21, pages 4198-4211.
Read now
Manasi K. Mayekar, Richard G. Gardner & Karen M. Arndt. (2013) The Recruitment of the Saccharomyces cerevisiae Paf1 Complex to Active Genes Requires a Domain of Rtf1 That Directly Interacts with the Spt4-Spt5 Complex. Molecular and Cellular Biology 33:16, pages 3259-3273.
Read now
Michaela Smolle, Jerry L. Workman & Swaminathan Venkatesh. (2013) reSETting chromatin during transcription elongation. Epigenetics 8:1, pages 10-15.
Read now
Elia M. Crisucci & Karen M. Arndt. (2012) Paf1 Restricts Gcn4 Occupancy and Antisense Transcription at the ARG1 Promoter. Molecular and Cellular Biology 32:6, pages 1150-1163.
Read now
Magdalena Murawska & Alexander Brehm. (2011) CHD chromatin remodelers and the transcription cycle. Transcription 2:6, pages 244-253.
Read now
Maria Soledad Santisteban, Mingda Hang & M. Mitchell Smith. (2011) Histone Variant H2A.Z and RNA Polymerase II Transcription Elongation. Molecular and Cellular Biology 31:9, pages 1848-1860.
Read now
Iva Ivanovska, Pierre-Étienne Jacques, Oliver J. Rando, François Robert & Fred Winston. (2011) Control of Chromatin Structure by Spt6: Different Consequences in Coding and Regulatory Regions. Molecular and Cellular Biology 31:3, pages 531-541.
Read now
Shonali Deb, Moorthy P Ponnusamy, Shantibhusan Senapati, Parama Dey & Surinder K Batra. (2008) Human PAF complexes in endocrine tumors and pancreatic cancer. Expert Review of Endocrinology & Metabolism 3:5, pages 557-565.
Read now
Michael L. Youdell, Kelby O. Kizer, Elena Kisseleva-Romanova, Stephen M. Fuchs, Eris Duro, Brian D. Strahl & Jane Mellor. (2008) Roles for Ctk1 and Spt6 in Regulating the Different Methylation States of Histone H3 Lysine 36. Molecular and Cellular Biology 28:16, pages 4915-4926.
Read now
Zhuoyu Ni, Abbie Saunders, Nicholas J. Fuda, Jie Yao, Jose-Ramon Suarez, Watt W. Webb & John T. Lis. (2008) P-TEFb Is Critical for the Maturation of RNA Polymerase II into Productive Elongation In Vivo. Molecular and Cellular Biology 28:3, pages 1161-1170.
Read now
Lei Zhang, Aaron G. L. Fletcher, Vanessa Cheung, Fred Winston & Laurie A. Stargell. (2008) Spn1 Regulates the Recruitment of Spt6 and the Swi/Snf Complex during Transcriptional Activation by RNA Polymerase II. Molecular and Cellular Biology 28:4, pages 1393-1403.
Read now
Chih-Chi Yuan, Xinyang Zhao, Laurence Florens, Selene K. Swanson, Michael P. Washburn & Nouria Hernandez. (2007) CHD8 Associates with Human Staf and Contributes to Efficient U6 RNA Polymerase III Transcription. Molecular and Cellular Biology 27:24, pages 8729-8738.
Read now
Debabrata Biswas, Rinku Dutta-Biswas & David J. Stillman. (2007) Chd1 and yFACT Act in Opposition in Regulating Transcription. Molecular and Cellular Biology 27:18, pages 6279-6287.
Read now
Marcie H. Warner, Kelli L. Roinick & Karen M. Arndt. (2007) Rtf1 Is a Multifunctional Component of the Paf1 Complex That Regulates Gene Expression by Directing Cotranscriptional Histone Modification. Molecular and Cellular Biology 27:17, pages 6103-6115.
Read now
Robert J. Klose, Kathryn E. Gardner, Gaoyang Liang, Hediye Erdjument-Bromage, Paul Tempst & Yi Zhang. (2007) Demethylation of Histone H3K36 and H3K9 by Rph1: a Vestige of an H3K9 Methylation System in Saccharomyces cerevisiae?. Molecular and Cellular Biology 27:11, pages 3951-3961.
Read now
Mary A. Braun, Patrick J. Costa, Elia M. Crisucci & Karen M. Arndt. (2007) Identification of Rkr1, a Nuclear RING Domain Protein with Functional Connections to Chromatin Modification in Saccharomyces cerevisiae. Molecular and Cellular Biology 27:8, pages 2800-2811.
Read now
Silvia Jimeno-González, Fernando Gómez-Herreros, Paula M. Alepuz & Sebastián Chávez. (2006) A Gene-Specific Requirement for FACT during Transcription Is Related to the Chromatin Organization of the Transcribed Region. Molecular and Cellular Biology 26:23, pages 8710-8721.
Read now
Hongfang Qiu, Cuihua Hu, Chi-Ming Wong & Alan G. Hinnebusch. (2006) The Spt4p Subunit of Yeast DSIF Stimulates Association of the Paf1 Complex with Elongating RNA Polymerase II. Molecular and Cellular Biology 26:8, pages 3135-3148.
Read now
Karen Adelman, Wenxiang Wei, M. Behfar Ardehali, Janis Werner, Bing Zhu, Danny Reinberg & John T. Lis. (2006) Drosophila Paf1 Modulates Chromatin Structure at Actively Transcribed Genes. Molecular and Cellular Biology 26:1, pages 250-260.
Read now
Donald Prather, Nevan J. Krogan, Andrew Emili, Jack F. Greenblatt & Fred Winston. (2005) Identification and Characterization of Elf1, a Conserved Transcription Elongation Factor in Saccharomyces cerevisiae. Molecular and Cellular Biology 25:22, pages 10122-10135.
Read now
Bhargavi Rao, Yoichiro Shibata, Brian D. Strahl & Jason D. Lieb. (2005) Dimethylation of Histone H3 at Lysine 36 Demarcates Regulatory and Nonregulatory Chromatin Genome-Wide. Molecular and Cellular Biology 25:21, pages 9447-9459.
Read now
Rhea T. Utley, Nicolas Lacoste, Olivier Jobin-Robitaille, Stéphane Allard & Jacques Côté. (2005) Regulation of NuA4 Histone Acetyltransferase Activity in Transcription and DNA Repair by Phosphorylation of Histone H4. Molecular and Cellular Biology 25:18, pages 8179-8190.
Read now
Debabrata Biswas, Yaxin Yu, Matthew Prall, Tim Formosa & David J. Stillman. (2005) The Yeast FACT Complex Has a Role in Transcriptional Initiation. Molecular and Cellular Biology 25:14, pages 5812-5822.
Read now
Pok Kwan Yang, Coralie Hoareau, Carine Froment, Bernard Monsarrat, Yves Henry & Guillaume Chanfreau. (2005) Cotranscriptional Recruitment of the Pseudouridylsynthetase Cbf5p and of the RNA Binding Protein Naf1p during H/ACA snoRNP Assembly. Molecular and Cellular Biology 25:8, pages 3295-3304.
Read now
Kristin Ingvarsdottir, Nevan J. Krogan, N. C. Tolga Emre, Anastasia Wyce, Natalie J. Thompson, Andrew Emili, Timothy R. Hughes, Jack F. Greenblatt & Shelley L. Berger. (2005) H2B Ubiquitin Protease Ubp8 and Sgf11 Constitute a Discrete Functional Module within the Saccharomyces cerevisiae SAGA Complex. Molecular and Cellular Biology 25:3, pages 1162-1172.
Read now
Tiaojiang Xiao, Cheng-Fu Kao, Nevan J. Krogan, Zu-Wen Sun, Jack F. Greenblatt, Mary Ann Osley & Brian D. Strahl. (2005) Histone H2B Ubiquitylation Is Associated with Elongating RNA Polymerase II. Molecular and Cellular Biology 25:2, pages 637-651.
Read now
Orit Rozenblatt-Rosen, Christina M. Hughes, Suraj J. Nannepaga, Kalai Selvi Shanmugam, Terry D. Copeland, Tad Guszczynski, James H. Resau & Matthew Meyerson. (2005) The Parafibromin Tumor Suppressor Protein Is Part of a Human Paf1 Complex. Molecular and Cellular Biology 25:2, pages 612-620.
Read now
Marc A. Schwabish & Kevin Struhl. (2004) Evidence for Eviction and Rapid Deposition of Histones upon Transcriptional Elongation by RNA Polymerase II. Molecular and Cellular Biology 24:23, pages 10111-10117.
Read now
Célia Jeronimo, Marie-France Langelier, Mahel Zeghouf, Marilena Cojocaru, Dominique Bergeron, Dania Baali, Diane Forget, Sanie Mnaimneh, Armaity P. Davierwala, Jeff Pootoolal, Mark Chandy, Veronica Canadien, Bryan K. Beattie, Dawn P. Richards, Jerry L. Workman, Timothy R. Hughes, Jack Greenblatt & Benoit Coulombe. (2004) RPAP1, a Novel Human RNA Polymerase II-Associated Protein Affinity Purified with Recombinant Wild-Type and Mutated Polymerase Subunits. Molecular and Cellular Biology 24:16, pages 7043-7058.
Read now
Chika Sawa, Eduard Nedea, Nevan Krogan, Tadashi Wada, Hiroshi Handa, Jack Greenblatt & Stephen Buratowski. (2004) Bromodomain Factor 1 (Bdf1) Is Phosphorylated by Protein Kinase CK2. Molecular and Cellular Biology 24:11, pages 4734-4742.
Read now
Masaki Endoh, Wenyan Zhu, Jun Hasegawa, Hajime Watanabe, Dong-Ki Kim, Masatoshi Aida, Naoto Inukai, Takashi Narita, Tomoko Yamada, Akiko Furuya, Hiroe Sato, Yuki Yamaguchi, Subhrangsu S. Mandal, Danny Reinberg, Tadashi Wada & Hiroshi Handa. (2004) Human Spt6 Stimulates Transcription Elongation by RNA Polymerase II In Vitro. Molecular and Cellular Biology 24:8, pages 3324-3336.
Read now
Kristin K. Baetz, Nevan J. Krogan, Andrew Emili, Jack Greenblatt & Philip Hieter. (2004) The ctf13-30/CTF13 Genomic Haploinsufficiency Modifier Screen Identifies the Yeast Chromatin Remodeling Complex RSC, Which Is Required for the Establishment of Sister Chromatid Cohesion. Molecular and Cellular Biology 24:3, pages 1232-1244.
Read now
Michael-Christopher Keogh, Vladimir Podolny & Stephen Buratowski. (2003) Bur1 Kinase Is Required for Efficient Transcription Elongation by RNA Polymerase II. Molecular and Cellular Biology 23:19, pages 7005-7018.
Read now
Shang Cao, Heather Bendall, Geoffrey G. Hicks, Abudi Nashabi, Hitoshi Sakano, Yoichi Shinkai, Marisa Gariglio, Eugene M. Oltz & H. Earl Ruley. (2003) The High-Mobility-Group Box Protein SSRP1/T160 Is Essential for Cell Viability in Day 3.5 Mouse Embryos. Molecular and Cellular Biology 23:15, pages 5301-5307.
Read now
Nevan J. Krogan, Minkyu Kim, Amy Tong, Ashkan Golshani, Gerard Cagney, Veronica Canadien, Dawn P. Richards, Bryan K. Beattie, Andrew Emili, Charles Boone, Ali Shilatifard, Stephen Buratowski & Jack Greenblatt. (2003) Methylation of Histone H3 by Set2 in Saccharomyces cerevisiae Is Linked to Transcriptional Elongation by RNA Polymerase II. Molecular and Cellular Biology 23:12, pages 4207-4218.
Read now
Takashi Narita, Yuki Yamaguchi, Keiichi Yano, Seiji Sugimoto, Sittinan Chanarat, Tadashi Wada, Dong-ki Kim, Jun Hasegawa, Masashi Omori, Naoto Inukai, Masaki Endoh, Tomoko Yamada & Hiroshi Handa. (2003) Human Transcription Elongation Factor NELF: Identification of Novel Subunits and Reconstitution of the Functionally Active Complex. Molecular and Cellular Biology 23:6, pages 1863-1873.
Read now
D. L. Lindstrom, S. L. Squazzo, N. Muster, T. A. Burckin, K. C. Wachter, C. A. Emigh, J. A. McCleery, J. R. Yates$suffix/text()$suffix/text() & G. A. Hartzog. (2003) Dual Roles for Spt5 in Pre-mRNA Processing and Transcription Elongation Revealed by Identification of Spt5-Associated Proteins. Molecular and Cellular Biology 23:4, pages 1368-1378.
Read now

Articles from other publishers (357)

Mitchell A Ellison, Sanchirmaa Namjilsuren, Margaret K Shirra, Matthew S Blacksmith, Rachel A Schusteff, Eleanor M Kerr, Fei Fang, Yufei Xiang, Yi Shi & Karen M Arndt. (2023) Spt6 directly interacts with Cdc73 and is required for Paf1 complex occupancy at active genes in Saccharomyces cerevisiae . Nucleic Acids Research.
Crossref
Deborah Gargano, Marco Segatto & Sabrina Di Bartolomeo. (2023) Regulation of Cell Plasticity by Bromodomain and Extraterminal Domain (BET) Proteins: A New Perspective in Glioblastoma Therapy. International Journal of Molecular Sciences 24:6, pages 5665.
Crossref
Emi Hashizaki, Miwa Sasai, Daisuke Okuzaki, Tsubasa Nishi, Takashi Kobayashi, Shiroh Iwanaga & Masahiro Yamamoto. (2023) Toxoplasma IWS1 Determines Fitness in Interferon-γ-Activated Host Cells and Mice by Indirectly Regulating ROP18 mRNA Expression . mBio 14:1.
Crossref
Simon Obermeyer, Henna Kapoor, Hanna Markusch & Klaus D. Grasser. (2023) Transcript elongation by RNA polymerase II in plants: factors, regulation and impact on gene expression . The Plant Journal.
Crossref
Justin Chan, Amarjeet Kumar & Hidetoshi Kono. (2022) RNAPII driven post-translational modifications of nucleosomal histones. Trends in Genetics 38:10, pages 1076-1095.
Crossref
Yoshimasa Takizawa & Hitoshi Kurumizaka. (2022) Chromatin structure meets cryo-EM: Dynamic building blocks of the functional architecture. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1865:7, pages 194851.
Crossref
Francheska López-Rivera, James Chuang, Dan Spatt, Rajaraman Gopalakrishnan & Fred Winston. (2022) Suppressor mutations that make the essential transcription factor Spn1/Iws1 dispensable in Saccharomyces cerevisiae . Genetics 222:2.
Crossref
Haruhiko Ehara, Tomoya Kujirai, Mikako Shirouzu, Hitoshi Kurumizaka & Shun-ichi Sekine. (2022) Structural basis of nucleosome disassembly and reassembly by RNAPII elongation complex with FACT. Science 377:6611.
Crossref
Bethany Sump & Jason Brickner. (2022) Establishment and inheritance of epigenetic transcriptional memory. Frontiers in Molecular Biosciences 9.
Crossref
Kadri Peil, Signe Värv, Ivar Ilves, Kersti Kristjuhan, Henel Jürgens & Arnold Kristjuhan. (2022) Transcriptional regulator Taf14 binds DNA and is required for the function of transcription factor TFIID in the absence of histone H2A.Z. Journal of Biological Chemistry 298:9, pages 102369.
Crossref
Qiong Xiao, Yong Xiao, Lian-Yun Li, Ming-Kai Chen & Min Wu. (2022) Multifaceted regulation of enhancers in cancer. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1865:6, pages 194839.
Crossref
Sha Li, Garrett Edwards, Catherine A. Radebaugh, Karolin Luger & Laurie A. Stargell. (2022) Spn1 and Its Dynamic Interactions with Spt6, Histones and Nucleosomes. Journal of Molecular Biology 434:13, pages 167630.
Crossref
Yohei Niikura & Katsumi Kitagawa. 2022. Hydrolases. Hydrolases.
Thom M. Molenaar & Fred van Leeuwen. (2022) SETD2: from chromatin modifier to multipronged regulator of the genome and beyond. Cellular and Molecular Life Sciences 79:6.
Crossref
Philipp Michl-Holzinger, Simon Obermeyer, Hanna Markusch, Alexander Pfab, Andreas Ettner, Astrid Bruckmann, Sabrina Babl, Gernot Längst, Uwe Schwartz, Andrey Tvardovskiy, Ole N Jensen, Akihisa Osakabe, Frédéric Berger & Klaus D Grasser. (2022) Phosphorylation of the FACT histone chaperone subunit SPT16 affects chromatin at RNA polymerase II transcriptional start sites in Arabidopsis . Nucleic Acids Research 50:9, pages 5014-5028.
Crossref
Jyoti Iyer, Lindsey K. Gentry, Mary Bergwell, Amy Smith, Sarah Guagliardo, Peter A. Kropp, Prabhu Sankaralingam, Yan Liu, Eric Spooner, Bruce Bowerman & Kevin F. O’Connell. (2022) The chromatin remodeling protein CHD-1 and the EFL-1/DPL-1 transcription factor cooperatively down regulate CDK-2 to control SAS-6 levels and centriole number. PLOS Genetics 18:4, pages e1009799.
Crossref
Ilana M. Nodelman, Sayan Das, Anneliese M. Faustino, Stephen D. Fried, Gregory D. Bowman & Jean-Paul Armache. (2022) Nucleosome recognition and DNA distortion by the Chd1 remodeler in a nucleotide-free state. Nature Structural & Molecular Biology 29:2, pages 121-129.
Crossref
Feilong Chen, Beibei Liu, Jianwei Zeng, Lu Guo, Xuan Ge, Wei Feng, De-Feng Li, Hao Zhou & Jiafu Long. (2022) Crystal Structure of the Core Module of the Yeast Paf1 Complex. Journal of Molecular Biology 434:2, pages 167369.
Crossref
Philipp E. Merkl, Christopher Schächner, Michael Pilsl, Katrin Schwank, Catharina Schmid, Gernot Längst, Philipp Milkereit, Joachim Griesenbeck & Herbert Tschochner. 2022. Ribosome Biogenesis. Ribosome Biogenesis 63 70 .
Andrej Alendar & Anton Berns. (2021) Sentinels of chromatin: chromodomain helicase DNA-binding proteins in development and disease. Genes & Development 35:21-22, pages 1403-1430.
Crossref
Célia Jeronimo, Andrew Angel, Vu Q. Nguyen, Jee Min Kim, Christian Poitras, Elie Lambert, Pierre Collin, Jane Mellor, Carl Wu & François Robert. (2021) FACT is recruited to the +1 nucleosome of transcribed genes and spreads in a Chd1-dependent manner. Molecular Cell 81:17, pages 3542-3559.e11.
Crossref
Blase M. LeBlanc, R. Yvette Moreno, Edwin E. Escobar, Mukesh Kumar Venkat Ramani, Jennifer S. Brodbelt & Yan Zhang. (2021) What's all the phos about? Insights into the phosphorylation state of the RNA polymerase II C-terminal domain via mass spectrometry . RSC Chemical Biology 2:4, pages 1084-1095.
Crossref
Alex M. Francette, Sarah A. Tripplehorn & Karen M. Arndt. (2021) The Paf1 Complex: A Keystone of Nuclear Regulation Operating at the Interface of Transcription and Chromatin. Journal of Molecular Biology 433:14, pages 166979.
Crossref
Alexis A. Reyes, Ryan D. Marcum & Yuan He. (2021) Structure and Function of Chromatin Remodelers. Journal of Molecular Biology 433:14, pages 166929.
Crossref
Nathan Gamarra & Geeta J. Narlikar. (2021) Collaboration through chromatin: motors of transcription and chromatin structure. Journal of Molecular Biology 433:14, pages 166876.
Crossref
He Leng, Shaofeng Liu, Yang Lei, Yuantao Tang, Shijia Gu, Jiazhi Hu, She Chen, Jianxun Feng & Qing Li. (2021) FACT interacts with Set3 HDAC and fine-tunes GAL1 transcription in response to environmental stimulation . Nucleic Acids Research 49:10, pages 5502-5519.
Crossref
Olga Viktorovskaya, James Chuang, Dhawal Jain, Natalia I. Reim, Francheska López-Rivera, Magdalena Murawska, Dan Spatt, L. Stirling Churchman, Peter J. Park & Fred Winston. (2021) Essential histone chaperones collaborate to regulate transcription and chromatin integrity. Genes & Development 35:9-10, pages 698-712.
Crossref
Kiran Kumar Kolathur. (2021) Role of promoters in regulating alternative splicing. Gene 782, pages 145523.
Crossref
Lucas Farnung, Moritz Ochmann, Maik Engeholm & Patrick Cramer. (2021) Structural basis of nucleosome transcription mediated by Chd1 and FACT. Nature Structural & Molecular Biology 28:4, pages 382-387.
Crossref
Lu Wang, Xiao Xiong, Zhimeng Yao, Jianlin Zhu, Yusheng Lin, Wan Lin, Kai Li, Xiaozheng Xu, Yi Guo, Yuping Chen, Yunlong Pan, Fuyou Zhou, Jun Fan, Yan Chen, Shegan Gao, Sai-Ching Jim Yeung & Hao Zhang. (2021) Chimeric RNA ASTN2-PAPPAas aggravates tumor progression and metastasis in human esophageal cancer. Cancer Letters 501, pages 1-11.
Crossref
Bryan C. Jensen, Isabelle Q. Phan, Jacquelyn R. McDonald, Aakash Sur, Mark A. Gillespie, Jeffrey A. Ranish, Marilyn Parsons & Peter J. Myler. (2021) Chromatin-Associated Protein Complexes Link DNA Base J and Transcription Termination in Leishmania . mSphere 6:1.
Crossref
Brian D. Strahl & Scott D. Briggs. (2021) The SAGA continues: The rise of cis- and trans-histone crosstalk pathways. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1864:2, pages 194600.
Crossref
Hongmei Fan, Shuxuan Quan, Shengdong Qi, Na Xu & Yong Wang. (2020) Novel Aspects of Nitrate Regulation in Arabidopsis. Frontiers in Plant Science 11.
Crossref
Tim Formosa & Fred Winston. (2020) The role of FACT in managing chromatin: disruption, assembly, or repair?. Nucleic Acids Research 48:21, pages 11929-11941.
Crossref
Natalia I Reim, James Chuang, Dhawal Jain, Burak H Alver, Peter J Park & Fred Winston. (2020) The conserved elongation factor Spn1 is required for normal transcription, histone modifications, and splicing in Saccharomyces cerevisiae. Nucleic Acids Research 48:18, pages 10241-10258.
Crossref
Brian D. Cosgrove & Charles A. Gersbach. (2020) Unwinding the Role of FACT in Cas9-based Genome Editing. Molecular Cell 79:3, pages 365-367.
Crossref
Seychelle M. Vos, Lucas Farnung, Andreas Linden, Henning Urlaub & Patrick Cramer. (2020) Structure of complete Pol II–DSIF–PAF–SPT6 transcription complex reveals RTF1 allosteric activation. Nature Structural & Molecular Biology 27:7, pages 668-677.
Crossref
Damien Hermand. (2020) Anticodon Wobble Uridine Modification by Elongator at the Crossroad of Cell Signaling, Differentiation, and Diseases. Epigenomes 4:2, pages 7.
Crossref
David E. Gordon, Ariane Watson, Assen Roguev, Simin Zheng, Gwendolyn M. Jang, Joshua Kane, Jiewei Xu, Jeffrey Z. Guo, Erica Stevenson, Danielle L. Swaney, Kathy Franks-Skiba, Erik Verschueren, Michael Shales, David C. Crosby, Alan D. Frankel, Alexander Marson, Ivan Marazzi, Gerard Cagney & Nevan J. Krogan. (2020) A Quantitative Genetic Interaction Map of HIV Infection. Molecular Cell 78:2, pages 197-209.e7.
Crossref
Michael T. Werner, Hongxin Wang, Nicole Hamagami, Sarah C. Hsu, Jennifer A. Yano, Aaron J. Stonestrom, Vivek Behera, Yichen Zong, Joel P. Mackay & Gerd A. Blobel. (2020) Comparative structure-function analysis of bromodomain and extraterminal motif (BET) proteins in a gene-complementation system. Journal of Biological Chemistry 295:7, pages 1898-1914.
Crossref
Wataru Kobayashi & Hitoshi Kurumizaka. (2019) Structural transition of the nucleosome during chromatin remodeling and transcription. Current Opinion in Structural Biology 59, pages 107-114.
Crossref
Liming Hou, Yating WangYu LiuNan ZhangIlya ShamovskyEvgeny Nudler, Bin TianBrian David Dynlacht. (2019) Paf1C regulates RNA polymerase II progression by modulating elongation rate. Proceedings of the National Academy of Sciences 116:29, pages 14583-14592.
Crossref
Kouta Mayanagi, Kazumi Saikusa, Naoyuki Miyazaki, Satoko Akashi, Kenji Iwasaki, Yoshifumi Nishimura, Kosuke Morikawa & Yasuo Tsunaka. (2019) Structural visualization of key steps in nucleosome reorganization by human FACT. Scientific Reports 9:1.
Crossref
Adam P. Tellier, Danielle Archambault, Kimberly D. Tremblay & Jesse Mager. (2019) The elongation factor Elof1 is required for mammalian gastrulation. PLOS ONE 14:7, pages e0219410.
Crossref
Alexandra Boginya, Rajesh Detroja, Avi Matityahu, Milana Frenkel-Morgenstern & Itay Onn. (2019) The chromatin remodeler Chd1 regulates cohesin in budding yeast and humans. Scientific Reports 9:1.
Crossref
Pratibha Bhalla, Dipti Vinayak Vernekar, Benoit Gilquin, Yohann Couté & Purnima Bhargava. (2019) Interactome of the yeast RNA polymerase III transcription machinery constitutes several chromatin modifiers and regulators of the genes transcribed by RNA polymerase II. Gene 702, pages 205-214.
Crossref
Rajaraman Gopalakrishnan, Sharon K Marr, Robert E Kingston & Fred Winston. (2019) A conserved genetic interaction between Spt6 and Set2 regulates H3K36 methylation. Nucleic Acids Research 47:8, pages 3888-3903.
Crossref
Yoo Jin Joo, Scott B. Ficarro, Yujin Chun, Jarrod A. Marto & Stephen Buratowski. (2019) In vitro analysis of RNA polymerase II elongation complex dynamics. Genes & Development 33:9-10, pages 578-589.
Crossref
Katlyn Hughes Burriss & Amber L. Mosley. (2019) Methods review: Mass spectrometry analysis of RNAPII complexes. Methods 159-160, pages 105-114.
Crossref
Yoo Jin Joo, Scott B. Ficarro, Jarrod A. Marto & Stephen Buratowski. (2019) In vitro assembly and proteomic analysis of RNA polymerase II complexes. Methods 159-160, pages 96-104.
Crossref
Micaela A. Godoy Herz & Alberto R. Kornblihtt. (2019) Alternative Splicing and Transcription Elongation in Plants. Frontiers in Plant Science 10.
Crossref
Jessica M. Lohmar, Olivier Puel, Jeffrey W. Cary & Ana M. Calvo. (2019) The Aspergillus flavus rtfA Gene Regulates Plant and Animal Pathogenesis and Secondary Metabolism . Applied and Environmental Microbiology 85:6.
Crossref
Reza K. Oqani, Tao Lin, Jae Eun Lee, Jeong Won Kang, Hyun Young Shin & Dong Il Jin. (2019) Iws1 and Spt6 Regulate Trimethylation of Histone H3 on Lysine 36 through Akt Signaling and are Essential for Mouse Embryonic Genome Activation. Scientific Reports 9:1.
Crossref
Alison K Thurston, Catherine A Radebaugh, Adam R Almeida, Juan Lucas Argueso & Laurie A Stargell. (2018) Genome Instability Is Promoted by the Chromatin-Binding Protein Spn1 in Saccharomyces cerevisiae . Genetics 210:4, pages 1227-1237.
Crossref
Raghuvar Dronamraju, Jenny L. Kerschner, Sarah A. Peck, Austin J. Hepperla, Alexander T. Adams, Katlyn D. Hughes, Sadia Aslam, Andrew R. Yoblinski, Ian J. Davis, Amber L. Mosley & Brian D. Strahl. (2018) Casein Kinase II Phosphorylation of Spt6 Enforces Transcriptional Fidelity by Maintaining Spn1-Spt6 Interaction. Cell Reports 25:12, pages 3476-3489.e5.
Crossref
Priya S. Shah, Nichole Link, Gwendolyn M. Jang, Phillip P. Sharp, Tongtong Zhu, Danielle L. Swaney, Jeffrey R. Johnson, John Von Dollen, Holly R. Ramage, Laura Satkamp, Billy Newton, Ruth Hüttenhain, Marine J. Petit, Tierney Baum, Amanda Everitt, Orly Laufman, Michel Tassetto, Michael Shales, Erica Stevenson, Gabriel N. Iglesias, Leila Shokat, Shashank Tripathi, Vinod Balasubramaniam, Laurence G. Webb, Sebastian Aguirre, A. Jeremy Willsey, Adolfo Garcia-Sastre, Katherine S. Pollard, Sara Cherry, Andrea V. Gamarnik, Ivan Marazzi, Jack Taunton, Ana Fernandez-Sesma, Hugo J. Bellen, Raul Andino & Nevan J. Krogan. (2018) Comparative Flavivirus-Host Protein Interaction Mapping Reveals Mechanisms of Dengue and Zika Virus Pathogenesis. Cell 175:7, pages 1931-1945.e18.
Crossref
Isabel M. Weßbecher, Inga Hinrichsen, Sebastian Funke, Thomas Oellerich, Guido Plotz, Stefan Zeuzem, Franz H. Grus, Ricardo M. Biondi & Angela Brieger. (2018) DNA mismatch repair activity of MutLα is regulated by CK2-dependent phosphorylation of MLH1 (S477). Molecular Carcinogenesis 57:12, pages 1723-1734.
Crossref
Pujuan DengYuqiao ZhouJunyi JiangHaojie LiWei TianYinghua CaoYan QinJaehoon KimRobert G. RoederDinshaw J. Patel & Zhanxin Wang. (2018) Transcriptional elongation factor Paf1 core complex adopts a spirally wrapped solenoidal topology. Proceedings of the National Academy of Sciences 115:40, pages 9998-10003.
Crossref
Ying Xie, Minying Zheng, Xinlei Chu, Yue Chen, Huisha Xu, Jiawei Wang, Hao Zhou & Jiafu Long. (2018) Paf1 and Ctr9 subcomplex formation is essential for Paf1 complex assembly and functional regulation. Nature Communications 9:1.
Crossref
Arturo Orlacchio, Aaron E. Stark, Claudia Foray, Foued Amari, Tyler Sheetz, Erika Reese, Anna Tessari, Krista La Perle, Dario Palmieri, Philip N. Tsichlis & Vincenzo Coppola. (2018) Genetic ablation of interacting with Spt6 (Iws1) causes early embryonic lethality. PLOS ONE 13:9, pages e0201030.
Crossref
Emmanuelle Gouot, Wajid Bhat, Anne Rufiange, Eric Fournier, Eric Paquet & Amine Nourani. (2018) Casein kinase 2 mediated phosphorylation of Spt6 modulates histone dynamics and regulates spurious transcription. Nucleic Acids Research 46:15, pages 7612-7630.
Crossref
Ramasubramanian Sundaramoorthy, Amanda L Hughes, Hassane El-Mkami, David G Norman, Helder Ferreira & Tom Owen-Hughes. (2018) Structure of the chromatin remodelling enzyme Chd1 bound to a ubiquitinylated nucleosome. eLife 7.
Crossref
Seychelle M. Vos, Lucas Farnung, Marc Boehning, Christoph Wigge, Andreas Linden, Henning Urlaub & Patrick Cramer. (2018) Structure of activated transcription complex Pol II–DSIF–PAF–SPT6. Nature 560:7720, pages 607-612.
Crossref
Alexander Pfab, Jesper T. Grønlund, Philipp Holzinger, Gernot Längst & Klaus D. Grasser. (2018) The Arabidopsis Histone Chaperone FACT: Role of the HMG-Box Domain of SSRP1. Journal of Molecular Biology 430:17, pages 2747-2759.
Crossref
Rakesh Pathak, Priyanka Singh, Sudha Ananthakrishnan, Sarah Adamczyk, Olivia Schimmel & Chhabi K Govind. (2018) Acetylation-Dependent Recruitment of the FACT Complex and Its Role in Regulating Pol II Occupancy Genome-Wide in Saccharomyces cerevisiae . Genetics 209:3, pages 743-756.
Crossref
Yoav Voichek, Karin Mittelman, Yulia Gordon, Raz Bar-Ziv, David Lifshitz Smit, Rom Shenhav & Naama Barkai. (2018) Epigenetic Control of Expression Homeostasis during Replication Is Stabilized by the Replication Checkpoint. Molecular Cell 70:6, pages 1121-1133.e9.
Crossref
Udit Dalwadi & Calvin K. Yip. (2018) Structural insights into the function of Elongator. Cellular and Molecular Life Sciences 75:9, pages 1613-1622.
Crossref
Steven van Nocker & Maria Julissa Ek-Ramos. 2018. Annual Plant Reviews online. Annual Plant Reviews online 225 252 .
Johanna Fitz, Tobias Neumann & Rushad Pavri. (2018) Regulation of RNA polymerase II processivity by Spt5 is restricted to a narrow window during elongation . The EMBO Journal 37:8.
Crossref
Matthew J. Rossi, William K.M. Lai & B. Franklin Pugh. (2018) Genome-wide determinants of sequence-specific DNA binding of general regulatory factors. Genome Research 28:4, pages 497-508.
Crossref
Ashutosh Shukla & Purnima Bhargava. (2018) Regulation of tRNA gene transcription by the chromatin structure and nucleosome dynamics. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1861:4, pages 295-309.
Crossref
Sha Li, Adam R Almeida, Catherine A Radebaugh, Ling Zhang, Xu Chen, Liangqun Huang, Alison K Thurston, Anna A Kalashnikova, Jeffrey C Hansen, Karolin Luger & Laurie A Stargell. (2018) The elongation factor Spn1 is a multi-functional chromatin binding protein. Nucleic Acids Research 46:5, pages 2321-2334.
Crossref
Maria I. Dauden, Marcin Jaciuk, Christoph W. Müller & Sebastian Glatt. (2017) Structural asymmetry in the eukaryotic Elongator complex. FEBS Letters 592:4, pages 502-515.
Crossref
Rahul V. Nene, Christopher D. Putnam, Bin-Zhong Li, Katarina G. Nguyen, Anjana Srivatsan, Christopher S. Campbell, Arshad Desai & Richard D. Kolodner. (2018) Cdc73 suppresses genome instability by mediating telomere homeostasis. PLOS Genetics 14:1, pages e1007170.
Crossref
S. Branden Van Oss, Christine E. Cucinotta & Karen M. Arndt. (2017) Emerging Insights into the Roles of the Paf1 Complex in Gene Regulation. Trends in Biochemical Sciences 42:10, pages 788-798.
Crossref
Yupeng Qiu, Robert F. Levendosky, Srinivas Chakravarthy, Ashok Patel, Gregory D. Bowman & Sua Myong. (2017) The Chd1 Chromatin Remodeler Shifts Nucleosomal DNA Bidirectionally as a Monomer. Molecular Cell 68:1, pages 76-88.e6.
Crossref
Fernando Gómez-Herreros, Thanasis Margaritis, Olga Rodríguez-Galán, Vicent Pelechano, Victoria Begley, Gonzalo Millán-Zambrano, Macarena Morillo-Huesca, Mari Cruz Muñoz-Centeno, José E. Pérez-Ortín, Jesús de la Cruz, Frank C. P. Holstege & Sebastián Chávez. (2017) The ribosome assembly gene network is controlled by the feedback regulation of transcription elongation. Nucleic Acids Research 45:16, pages 9302-9318.
Crossref
Hannah L. Fox, Jill A. Dembowski & Neal A. DeLuca. (2017) A Herpesviral Immediate Early Protein Promotes Transcription Elongation of Viral Transcripts. mBio 8:3.
Crossref
John B. Crickard, Jaehyoun Lee, Tae-Hee Lee & Joseph C. Reese. (2017) The elongation factor Spt4/5 regulates RNA polymerase II transcription through the nucleosome. Nucleic Acids Research 45:11, pages 6362-6374.
Crossref
B. Ashok Reddy, Célia Jeronimo & François Robert. (2017) Recent Perspectives on the Roles of Histone Chaperones in Transcription Regulation. Current Molecular Biology Reports 3:1, pages 1-10.
Crossref
Maria I Dauden, Jan Kosinski, Olga Kolaj‐Robin, Ambroise Desfosses, Alessandro Ori, Celine Faux, Niklas A Hoffmann, Osita F Onuma, Karin D Breunig, Martin Beck, Carsten Sachse, Bertrand Séraphin, Sebastian Glatt & Christoph W Müller. (2016) Architecture of the yeast Elongator complex. EMBO reports 18:2, pages 264-279.
Crossref
Harry Fischl, Françoise S. Howe, Andre Furger & Jane Mellor. (2017) Paf1 Has Distinct Roles in Transcription Elongation and Differential Transcript Fate. Molecular Cell 65:4, pages 685-698.e8.
Crossref
Yinfeng Zhang, Saman M. Najmi & David A. Schneider. (2017) Transcription factors that influence RNA polymerases I and II: To what extent is mechanism of action conserved?. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1860:2, pages 246-255.
Crossref
Long-Cheng Li. 2017. RNA Activation. RNA Activation 1 20 .
Robert F Levendosky, Anton Sabantsev, Sebastian Deindl & Gregory D Bowman. (2016) The Chd1 chromatin remodeler shifts hexasomes unidirectionally. eLife 5.
Crossref
Dhananjay Chaturvedi, Mayu Inaba, Shane Scoggin & Michael Buszczak. (2016) Drosophila CG2469 Encodes a Homolog of Human CTR9 and Is Essential for Development . G3 Genes|Genomes|Genetics 6:12, pages 3849-3857.
Crossref
Lynn Glowczewski Bedard, Raghuvar Dronamraju, Jenny L. Kerschner, Gerald O. Hunter, Elizabeth DeVlieger Axley, Asha K. Boyd, Brian D. Strahl & Amber L. Mosley. (2016) Quantitative Analysis of Dynamic Protein Interactions during Transcription Reveals a Role for Casein Kinase II in Polymerase-associated Factor (PAF) Complex Phosphorylation and Regulation of Histone H2B Monoubiquitylation. Journal of Biological Chemistry 291:26, pages 13410-13420.
Crossref
Jessica M. Lohmar, Pamela Y. Harris-Coward, Jeffrey W. Cary, Sourabh Dhingra & Ana M. Calvo. (2016) rtfA, a putative RNA-Pol II transcription elongation factor gene, is necessary for normal morphological and chemical development in Aspergillus flavus. Applied Microbiology and Biotechnology 100:11, pages 5029-5041.
Crossref
J. Brooks Crickard, Jianhua Fu & Joseph C. Reese. (2016) Biochemical Analysis of Yeast Suppressor of Ty 4/5 (Spt4/5) Reveals the Importance of Nucleic Acid Interactions in the Prevention of RNA Polymerase II Arrest. Journal of Biological Chemistry 291:19, pages 9853-9870.
Crossref
Laura Marcos-Villar, Alejandra Pazo & Amelia Nieto. (2016) Influenza Virus and Chromatin: Role of the CHD1 Chromatin Remodeler in the Virus Life Cycle. Journal of Virology 90:7, pages 3694-3707.
Crossref
Victoria Portnoy, Szu Hua Sharon Lin, Kathy H Li, Alma Burlingame, Zheng-Hui Hu, Hao Li & Long-Cheng Li. (2016) saRNA-guided Ago2 targets the RITA complex to promoters to stimulate transcription. Cell Research 26:3, pages 320-335.
Crossref
Santosh K Gothwal, Neem J Patel, Meaghan M Colletti, Hiroyuki Sasanuma, Miki Shinohara, Andreas Hochwagen & Akira Shinohara. (2016) The Double-Strand Break Landscape of Meiotic Chromosomes Is Shaped by the Paf1 Transcription Elongation Complex in Saccharomyces cerevisiae . Genetics 202:2, pages 497-512.
Crossref
Yan Yang, Wencheng Li, Mainul Hoque, Liming Hou, Steven Shen, Bin Tian & Brian D. Dynlacht. (2016) PAF Complex Plays Novel Subunit-Specific Roles in Alternative Cleavage and Polyadenylation. PLOS Genetics 12:1, pages e1005794.
Crossref
Christian Hoffmann & Heinz Neumann. (2015) In Vivo Mapping of FACT–Histone Interactions Identifies a Role of Pob3 C-terminus in H2A–H2B Binding . ACS Chemical Biology 10:12, pages 2753-2763.
Crossref
Laura McCullough, Zaily Connell, Charisse Petersen & Tim Formosa. (2015) The Abundant Histone Chaperones Spt6 and FACT Collaborate to Assemble, Inspect, and Maintain Chromatin Structure in Saccharomyces cerevisiae . Genetics 201:3, pages 1031-1045.
Crossref
David J. Kemble, Laura L. McCullough, Frank G. Whitby, Tim Formosa & Christopher P. Hill. (2015) FACT Disrupts Nucleosome Structure by Binding H2A-H2B with Conserved Peptide Motifs. Molecular Cell 60:2, pages 294-306.
Crossref
Geetaram Sahu, Kalamo Farley, Nazira El-Hage, Benjamas Aiamkitsumrit, Ryan Fassnacht, Fatah Kashanchi, Alex Ochem, Gary L. Simon, Jonathan Karn, Kurt F. Hauser & Mudit Tyagi. (2015) Cocaine promotes both initiation and elongation phase of HIV-1 transcription by activating NF-κB and MSK1 and inducing selective epigenetic modifications at HIV-1 LTR. Virology 483, pages 185-202.
Crossref
Fei Xavier Chen, Ashley R. Woodfin, Alessandro Gardini, Ryan A. Rickels, Stacy A. Marshall, Edwin R. Smith, Ramin Shiekhattar & Ali Shilatifard. (2015) PAF1, a Molecular Regulator of Promoter-Proximal Pausing by RNA Polymerase II. Cell 162:5, pages 1003-1015.
Crossref
Musinu Zakari, Rhonda Trimble Ross, Allison Peak, Marco Blanchette, Chris Seidel & Jennifer L. Gerton. (2015) The SMC Loader Scc2 Promotes ncRNA Biogenesis and Translational Fidelity. PLOS Genetics 11:7, pages e1005308.
Crossref
Chin-Chi Chen, Sarion Bowers, Zoltan Lipinszki, Jason Palladino, Sarah Trusiak, Emily Bettini, Leah Rosin, Marcin R. Przewloka, David M. Glover, Rachel J. O’Neill & Barbara G. Mellone. (2015) Establishment of Centromeric Chromatin by the CENP-A Assembly Factor CAL1 Requires FACT-Mediated Transcription. Developmental Cell 34:1, pages 73-84.
Crossref
Célia Jeronimo, Shinya Watanabe, Craig D. Kaplan, Craig L. Peterson & François Robert. (2015) The Histone Chaperones FACT and Spt6 Restrict H2A.Z from Intragenic Locations. Molecular Cell 58:6, pages 1113-1123.
Crossref
Gregory D. Bowman & Michael G. Poirier. (2014) Post-Translational Modifications of Histones That Influence Nucleosome Dynamics. Chemical Reviews 115:6, pages 2274-2295.
Crossref
John LaCava, Kelly R. Molloy, Martin S. Taylor, Michal Domanski, Brian T. Chait & Michael P. Rout. (2015) Affinity proteomics to study endogenous protein complexes: Pointers, pitfalls, preferences and perspectives. BioTechniques 58:3, pages 103-119.
Crossref
Wael Abdel-Fattah, Daniel Jablonowski, Rachael Di Santo, Kathrin L. Thüring, Viktor Scheidt, Alexander Hammermeister, Sara ten Have, Mark Helm, Raffael Schaffrath & Michael J. R. Stark. (2015) Phosphorylation of Elp1 by Hrr25 Is Required for Elongator-Dependent tRNA Modification in Yeast. PLoS Genetics 11:1, pages e1004931.
Crossref
Annabelle Gérard, Emmanuel Ségéral, Monica Naughtin, Ahmed Abdouni, Bénédicte Charmeteau, Rémi Cheynier, Jean-Christophe Rain & Stéphane Emiliani. (2015) The Integrase Cofactor LEDGF/p75 Associates with Iws1 and Spt6 for Postintegration Silencing of HIV-1 Gene Expression in Latently Infected Cells. Cell Host & Microbe 17:1, pages 107-117.
Crossref
Melissa J Rodgers, David J Banks, Kenneth A Bradley & John AT Young. (2014) CHD1 and CHD2 are positive regulators of HIV-1 gene expression. Virology Journal 11:1.
Crossref
Geetha S. Hewawasam, Mark Mattingly, Swaminathan Venkatesh, Ying Zhang, Laurence Florens, Jerry L. Workman & Jennifer L. Gerton. (2014) Phosphorylation by Casein Kinase 2 Facilitates Psh1 Protein-assisted Degradation of Cse4 Protein. Journal of Biological Chemistry 289:42, pages 29297-29309.
Crossref
Gary M.R. Deyter & Sue Biggins. (2014) The FACT complex interacts with the E3 ubiquitin ligase Psh1 to prevent ectopic localization of CENP-A. Genes & Development 28:16, pages 1815-1826.
Crossref
Xiaolei Wang, Jiani Chen, Zhouli Xie, Sanzhen Liu, Trevor Nolan, Huaxun Ye, Mingcai Zhang, Hongqing Guo, Patrick S. Schnable, Zhaohu Li & Yanhai Yin. (2014) Histone Lysine Methyltransferase SDG8 Is Involved in Brassinosteroid-Regulated Gene Expression in Arabidopsis thaliana. Molecular Plant 7:8, pages 1303-1315.
Crossref
Stefan Gerhardy, Anna Maria Menet, Cohue Peña, Janusz Jurand Petkowski & Vikram Govind Panse. (2014) Assembly and nuclear export of pre-ribosomal particles in budding yeast. Chromosoma 123:4, pages 327-344.
Crossref
Volker SchweikhardCong MengKenji Murakami, Craig D. Kaplan, Roger D. Kornberg & Steven M. Block. (2014) Transcription factors TFIIF and TFIIS promote transcript elongation by RNA polymerase II by synergistic and independent mechanisms. Proceedings of the National Academy of Sciences 111:18, pages 6642-6647.
Crossref
Julius Dürr, Ihab B. Lolas, Brian B. Sørensen, Veit Schubert, Andreas Houben, Michael Melzer, Rainer Deutzmann, Marion Grasser & Klaus D. Grasser. (2022) The transcript elongation factor SPT4/SPT5 is involved in auxin-related gene expression in Arabidopsis . Nucleic Acids Research 42:7, pages 4332-4347.
Crossref
Toyotaka IshibashiManchuta DangkulwanichYves CoelloTroy A. Lionberger, Lucyna Lubkowska, Alfred S. Ponticelli, Mikhail Kashlev & Carlos Bustamante. (2014) Transcription factors IIS and IIF enhance transcription efficiency by differentially modifying RNA polymerase pausing dynamics. Proceedings of the National Academy of Sciences 111:9, pages 3419-3424.
Crossref
Behailu B. Aklilu, Ryan S. Soderquist & Kevin M. Culligan. (2014) Genetic analysis of the Replication Protein A large subunit family in Arabidopsis reveals unique and overlapping roles in DNA repair, meiosis and DNA replication. Nucleic Acids Research 42:5, pages 3104-3118.
Crossref
Hyeon-Seok Yoo, Yongwook Choi, Narae Ahn, Saseong Lee, Wan-Uk Kim, Min Seong Jang, Myoung Ho Jang, Yon Su Kim & Joo-Yeon Yoo. (2014) Transcriptional Regulator CTR9 Inhibits Th17 Differentiation via Repression of IL-17 Expression. The Journal of Immunology 192:4, pages 1440-1448.
Crossref
Ioannis Sanidas, Christos Polytarchou, Maria Hatziapostolou, Scott A. Ezell, Filippos Kottakis, Lan Hu, Ailan Guo, Jianxin Xie, Michael J. Comb, Dimitrios Iliopoulos & Philip N. Tsichlis. (2014) Phosphoproteomics Screen Reveals Akt Isoform-Specific Signals Linking RNA Processing to Lung Cancer. Molecular Cell 53:4, pages 577-590.
Crossref
Warren P. Voth, Shinya Takahata, Joy L. Nishikawa, Benjamin M. Metcalfe, Anders M. Näär & David J. Stillman. (2014) A Role for FACT in Repopulation of Nucleosomes at Inducible Genes. PLoS ONE 9:1, pages e84092.
Crossref
Michaela Smolle & Swaminathan Venkatesh. 2014. Fundamentals of Chromatin. Fundamentals of Chromatin 427 489 .
Jean Mbogning, Stephen Nagy, Viviane Pagé, Beate Schwer, Stewart Shuman, Robert P. Fisher & Jason C. Tanny. (2013) The PAF Complex and Prf1/Rtf1 Delineate Distinct Cdk9-Dependent Pathways Regulating Transcription Elongation in Fission Yeast. PLoS Genetics 9:12, pages e1004029.
Crossref
Célia Jeronimo, Alain R. Bataille & François Robert. (2013) The Writers, Readers, and Functions of the RNA Polymerase II C-Terminal Domain Code. Chemical Reviews 113:11, pages 8491-8522.
Crossref
Adam D. Wier, Manasi K. Mayekar, Annie Héroux, Karen M. Arndt & Andrew P. VanDemark. (2013) Structural basis for Spt5-mediated recruitment of the Paf1 complex to chromatin. Proceedings of the National Academy of Sciences 110:43, pages 17290-17295.
Crossref
Farida Tripodi, Raffaele Nicastro, Sara Busnelli, Claudia Cirulli, Elisa Maffioli, Gabriella Tedeschi, Lilia Alberghina & Paola Coccetti. (2013) Protein Kinase CK2 Holoenzyme Promotes Start-Specific Transcription in Saccharomyces cerevisiae. Eukaryotic Cell 12:9, pages 1271-1280.
Crossref
Paraskevi Georgakopoulos, Robin A. Lockington & Joan M. Kelly. (2013) The Spt-Ada-Gcn5 Acetyltransferase (SAGA) Complex in Aspergillus nidulans. PLoS ONE 8:6, pages e65221.
Crossref
Laura Fontrodona, Montserrat Porta-de-la-Riva, Tomás Morán, Wei Niu, Mònica Díaz, David Aristizábal-Corrales, Alberto Villanueva, Simó Schwartz, Valerie Reinke & Julián Cerón. (2013) RSR-2, the Caenorhabditis elegans Ortholog of Human Spliceosomal Component SRm300/SRRM2, Regulates Development by Influencing the Transcriptional Machinery. PLoS Genetics 9:6, pages e1003543.
Crossref
Assen Roguev, Dale Talbot, Gian Luca Negri, Michael Shales, Gerard Cagney, Sourav Bandyopadhyay, Barbara Panning & Nevan J Krogan. (2013) Quantitative genetic-interaction mapping in mammalian cells. Nature Methods 10:5, pages 432-437.
Crossref
Hyun-Seok Yoo, Jung-Hwa Seo & Joo-Yeon Yoo. (2013) CTR9, a Component of PAF Complex, Controls Elongation Block at the c-Fos Locus via Signal-Dependent Regulation of Chromatin-Bound NELF Dissociation. PLoS ONE 8:4, pages e61055.
Crossref
Rwik Sen, Shweta Lahudkar, Geetha Durairaj & Sukesh R. Bhaumik. (2013) Functional Analysis of Bre1p, an E3 Ligase for Histone H2B Ubiquitylation, in Regulation of RNA Polymerase II Association with Active Genes and Transcription in Vivo. Journal of Biological Chemistry 288:14, pages 9619-9633.
Crossref
Monica Soldi & Tiziana Bonaldi. (2013) The Proteomic Investigation of Chromatin Functional Domains Reveals Novel Synergisms among Distinct Heterochromatin Components. Molecular & Cellular Proteomics 12:3, pages 764-780.
Crossref
Charles E Kubicek, Robert D Chisholm, Sachiko Takayama & Diane K Hawley. (2013) RNA Polymerase II Mutations Conferring Defects in Poly(A) Site Cleavage and Termination in Saccharomyces cerevisiae . G3 Genes|Genomes|Genetics 3:2, pages 167-180.
Crossref
Brett N. Tomson & Karen M. Arndt. (2013) The many roles of the conserved eukaryotic Paf1 complex in regulating transcription, histone modifications, and disease states. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1829:1, pages 116-126.
Crossref
Erica A. Moehle, Colm J. Ryan, Nevan J. Krogan, Tracy L. Kress & Christine Guthrie. (2012) The Yeast SR-Like Protein Npl3 Links Chromatin Modification to mRNA Processing. PLoS Genetics 8:11, pages e1003101.
Crossref
Alicia García, Alejandro Collin & Olga Calvo. (2012) Sub1 associates with Spt5 and influences RNA polymerase II transcription elongation rate. Molecular Biology of the Cell 23:21, pages 4297-4312.
Crossref
Bianca P Hennig, Katja Bendrin, Yang Zhou & Tamás Fischer. (2012) Chd1 chromatin remodelers maintain nucleosome organization and repress cryptic transcription. EMBO reports 13:11, pages 997-1003.
Crossref
Jill S Butler & Sharon Y R Dent. (2012) Chromatin 'resetting' during transcription elongation: a central role for methylated H3K36. Nature Structural & Molecular Biology 19:9, pages 863-864.
Crossref
Michaela Smolle, Swaminathan Venkatesh, Madelaine M Gogol, Hua Li, Ying Zhang, Laurence Florens, Michael P Washburn & Jerry L Workman. (2012) Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchange. Nature Structural & Molecular Biology 19:9, pages 884-892.
Crossref
Taras Makhnevych, Philip Wong, Oxana Pogoutse, Franco J. Vizeacoumar, Jack F. Greenblatt, Andrew Emili & Walid A. Houry. (2012) Hsp110 is required for spindle length control. Journal of Cell Biology 198:4, pages 623-636.
Crossref
Marta Radman-Livaja, Tiffani K. Quan, Lourdes Valenzuela, Jennifer A. Armstrong, Tibor van Welsem, TaeSoo Kim, Laura J. Lee, Stephen Buratowski, Fred van Leeuwen, Oliver J. Rando & Grant A. Hartzog. (2012) A Key Role for Chd1 in Histone H3 Dynamics at the 3′ Ends of Long Genes in Yeast. PLoS Genetics 8:7, pages e1002811.
Crossref
Qiang ZhouTiandao LiDavid H. Price. (2012) RNA Polymerase II Elongation Control. Annual Review of Biochemistry 81:1, pages 119-143.
Crossref
Anthony S. Piro, Manasi K. Mayekar, Marcie H. Warner, Christopher P. Davis & Karen M. Arndt. (2012) Small region of Rtf1 protein can substitute for complete Paf1 complex in facilitating global histone H2B ubiquitylation in yeast. Proceedings of the National Academy of Sciences 109:27, pages 10837-10842.
Crossref
Sigurd Braun & Hiten D Madhani. (2012) Shaping the landscape: mechanistic consequences of ubiquitin modification of chromatin. EMBO reports 13:7, pages 619-630.
Crossref
Sanjeev Shukla & Shalini Oberdoerffer. (2012) Co-transcriptional regulation of alternative pre-mRNA splicing. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1819:7, pages 673-683.
Crossref
Heng Zhang, Brett Bishop, Whitney Ringenberg, William M. Muir & Joe Ogas. (2012) The CHD3 Remodeler PICKLE Associates with Genes Enriched for Trimethylation of Histone H3 Lysine 27    . Plant Physiology 159:1, pages 418-432.
Crossref
Sarah J Hainer, Brittany A Charsar, Shayna B Cohen & Joseph A Martens. (2012) Identification of Mutant Versions of the Spt16 Histone Chaperone That Are Defective for Transcription-Coupled Nucleosome Occupancy in Saccharomyces cerevisiae . G3 Genes|Genomes|Genetics 2:5, pages 555-567.
Crossref
Pengfei Sui, Jing Jin, Sheng Ye, Chen Mu, Juan Gao, Haiyang Feng, Wen-Hui Shen, Yu Yu & Aiwu Dong. (2012) H3K36 methylation is critical for brassinosteroid-regulated plant growth and development in rice. The Plant Journal 70:2, pages 340-347.
Crossref
Shigehiro Osada, Kiyoto Kageyama, Yuji Ohnishi, Jun-ichi Nishikawa, Tsutomu Nishihara & Masayoshi Imagawa. (2011) Inositol phosphate kinase Vip1p interacts with histone chaperone Asf1p in Saccharomyces cerevisiae. Molecular Biology Reports 39:4, pages 4989-4996.
Crossref
Christopher G. Amrich, Christopher P. Davis, Walter P. Rogal, Margaret K. Shirra, Annie Heroux, Richard G. Gardner, Karen M. Arndt & Andrew P. VanDemark. (2012) Cdc73 Subunit of Paf1 Complex Contains C-terminal Ras-like Domain That Promotes Association of Paf1 Complex with Chromatin. Journal of Biological Chemistry 287:14, pages 10863-10875.
Crossref
Qing Li, Rebecca Burgess & Zhiguo Zhang. (2012) All roads lead to chromatin: Multiple pathways for histone deposition. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1819:3-4, pages 238-246.
Crossref
Oliver J Rando & Fred Winston. (2012) Chromatin and Transcription in Yeast. Genetics 190:2, pages 351-387.
Crossref
David Alan Schneider. (2012) RNA polymerase I activity is regulated at multiple steps in the transcription cycle: Recent insights into factors that influence transcription elongation. Gene 493:2, pages 176-184.
Crossref
Christoph F. Kurat, Jean-Philippe Lambert, Dewald van Dyk, Kyle Tsui, Harm van Bakel, Supipi Kaluarachchi, Helena Friesen, Pinay Kainth, Corey Nislow, Daniel Figeys, Jeffrey Fillingham & Brenda J. Andrews. (2011) Restriction of histone gene transcription to S phase by phosphorylation of a chromatin boundary protein. Genes & Development 25:23, pages 2489-2501.
Crossref
Duane D. Winkler, Uma M. Muthurajan, Aaron R. Hieb & Karolin Luger. (2011) Histone Chaperone FACT Coordinates Nucleosome Interaction through Multiple Synergistic Binding Events. Journal of Biological Chemistry 286:48, pages 41883-41892.
Crossref
Elia M. Crisucci & Karen M. Arndt. (2011) The Roles of the Paf1 Complex and Associated Histone Modifications in Regulating Gene Expression. Genetics Research International 2011, pages 1-15.
Crossref
Andrea A. Duina. (2011) Histone Chaperones Spt6 and FACT: Similarities and Differences in Modes of Action at Transcribed Genes. Genetics Research International 2011, pages 1-12.
Crossref
Marie N. Yearling, Catherine A. Radebaugh & Laurie A. Stargell. (2011) The Transition of Poised RNA Polymerase II to an Actively Elongating State Is a “Complex” Affair. Genetics Research International 2011, pages 1-7.
Crossref

Displaying 200 of 403 citing articles. Use the download link below to view the full list of citing articles.

Download full citations list

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.