Autophagy, Volume 9, Issue 5 (2013)

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Autophagy, Volume 9, Issue 5 (2013)

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Editor's Corner

Editorial
The many uses of autophagosomes
Amal O. Amer
Pages: 633-634
Published online: 18 Mar 2013
AbstractforThe many uses of autophagosomes | Full Text | References | PDF (1,011.2 KB)
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Autophagy Community

Autophagy researchers
Pages: 635-638
Published online: 19 Feb 2013
First Page PreviewforAutophagy researchers | Full Text | PDF (951 KB)
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Review

Review Article
The impact of autophagic processes on the intracellular fate of Helicobacter pylori
More tricks from an enigmatic pathogen?
Nadia S. Deen, Sue J. Huang, Lan Gong, Terry Kwok & Rodney J. Devenish
Pages: 639-652
Published online: 08 Feb 2013
AbstractforThe impact of autophagic processes on the intracellular fate of Helicobacter pylori | Full Text | References | PDF (1.8 MB)
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Basic Research Paper

Article
A chimerical phagocytosis model reveals the recruitment by Sertoli cells of autophagy for the degradation of ingested illegitimate substrates
Marina G. Yefimova, Nadia Messaddeq, Thomas Harnois, Annie-Claire Meunier, Jonathan Clarhaut, Anaïs Noblanc, Jean-Luc Weickert, Anne Cantereau, Michel Philippe, Nicolas Bourmeyster & Omar Benzakour
Pages: 653-666
Published online: 25 Feb 2013
AbstractforA chimerical phagocytosis model reveals the recruitment by Sertoli cells of autophagy for the degradation of ingested illegitimate substrates | Full Text | References | PDF (2.4 MB)
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Article
Autophagy and formation of tubulovesicular autophagosomes provide a barrier against nonviral gene delivery
Rebecca Roberts, Wafa’ T. Al-Jamal, Matthew Whelband, Paul Thomas, Matthew Jefferson, Jeroen van den Bossche, Penny P. Powell, Kostas Kostarelos & Thomas Wileman
Pages: 667-682
Published online: 19 Feb 2013
AbstractforAutophagy and formation of tubulovesicular autophagosomes provide a barrier against nonviral gene delivery | Full Text | References | PDF (4.7 MB) | Supplemental
  • 1654 Views
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Article
Type I interferons induce autophagy in certain human cancer cell lines
Hana Schmeisser, Samuel B. Fey, Julie Horowitz, Elizabeth R. Fischer, Corey A. Balinsky, Kotaro Miyake, Joseph Bekisz, Andrew L. Snow & Kathryn C. Zoon
Pages: 683-696
Published online: 18 Feb 2013
AbstractforType I interferons induce autophagy in certain human cancer cell lines | Full Text | References | PDF (2.8 MB) | Supplemental
  • 2324 Views
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Article
Energy deprivation by silibinin in colorectal cancer cells
A double-edged sword targeting both apoptotic and autophagic machineries
Komal Raina, Chapla Agarwal, Ritambhara Wadhwa, Natalie J. Serkova & Rajesh Agarwal
Pages: 697-713
Published online: 27 Feb 2013
AbstractforEnergy deprivation by silibinin in colorectal cancer cells | Full Text | References | PDF (5 MB) | Supplemental
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Article
Inhibition of the autophagic flux by salinomycin in breast cancer stem-like/progenitor cells interferes with their maintenance
Wen Yue, Ahmed Hamaï, Giovanni Tonelli, Chantal Bauvy, Valérie Nicolas, Hugo Tharinger, Patrice Codogno & Maryam Mehrpour
Pages: 714-729
Published online: 21 Mar 2013
AbstractforInhibition of the autophagic flux by salinomycin in breast cancer stem-like/progenitor cells interferes with their maintenance | Full Text | References | PDF (4.2 MB) | Supplemental
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Article
Interleukin 17A inhibits autophagy through activation of PIK3CA to interrupt the GSK3B-mediated degradation of BCL2 in lung epithelial cells
Hong Liu, Su Mi, Zhe Li, Fang Hua & Zhuo-Wei Hu
Pages: 730-742
Published online: 20 Mar 2013
AbstractforInterleukin 17A inhibits autophagy through activation of PIK3CA to interrupt the GSK3B-mediated degradation of BCL2 in lung epithelial cells | Full Text | References | PDF (4.9 MB) | Supplemental
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Article
Tumor suppressor gene PDCD4 negatively regulates autophagy by inhibiting the expression of autophagy-related gene ATG5
Xingguo Song, Xia Zhang, Xiaoyan Wang, Faliang Zhu, Chun Guo, Qun Wang, Yongyu Shi, Jianing Wang, Youhai Chen & Lining Zhang
Pages: 743-755
Published online: 13 Mar 2013
AbstractforTumor suppressor gene PDCD4 negatively regulates autophagy by inhibiting the expression of autophagy-related gene ATG5 | Full Text | References | PDF (15.5 MB) | Supplemental
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Toolbox

Article
LC3 fluorescent puncta in autophagosomes or in protein aggregates can be distinguished by FRAP analysis in living cells
Liang Wang, Min Chen, Jie Yang & Zhihong Zhang
Pages: 756-769
Published online: 12 Mar 2013
AbstractforLC3 fluorescent puncta in autophagosomes or in protein aggregates can be distinguished by FRAP analysis in living cells | Full Text | References | PDF (3 MB) | Supplemental
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Protocol

Brief Report
Qualitative and quantitative characterization of protein-phosphoinositide interactions with liposome-based methods
Ricarda A. Busse, Andreea Scacioc, Javier M. Hernandez, Roswitha Krick, Milena Stephan, Andreas Janshoff, Michael Thumm & Karin Kühnel
Pages: 770-777
Published online: 27 Feb 2013
AbstractforQualitative and quantitative characterization of protein-phosphoinositide interactions with liposome-based methods | Full Text | References | PDF (1.3 MB)
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Autophagic Punctum

Article Commentary
Structures of Atg7-Atg3 and Atg7-Atg10 reveal noncanonical mechanisms of E2 recruitment by the autophagy E1
Stephen E. Kaiser, Yu Qiu, Julie E. Coats, Kai Mao, Daniel J Klionsky & Brenda A. Schulman
Pages: 778-780
Published online: 06 Feb 2013
AbstractforStructures of Atg7-Atg3 and Atg7-Atg10 reveal noncanonical mechanisms of E2 recruitment by the autophagy E1 | Full Text | PDF (1 MB)
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Article Commentary
Autophagy selectively regulates miRNA homeostasis
Derrick Gibbings, Serge Mostowy & Olivier Voinnet
Pages: 781-783
Published online: 19 Feb 2013
AbstractforAutophagy selectively regulates miRNA homeostasis | Full Text | PDF (787.5 KB)
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Article Commentary
An essential role for the ATG8 ortholog LC3C in antibacterial autophagy
Natalia von Muhlinen, Masato Akutsu, Benjamin J. Ravenhill, Ágnes Foeglein, Stuart Bloor, Trevor J. Rutherford, Stefan M.V. Freund, David Komander & Felix Randow
Pages: 784-786
Published online: 22 Feb 2013
AbstractforAn essential role for the ATG8 ortholog LC3C in antibacterial autophagy | Full Text | PDF (865.5 KB)
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Article Commentary
Ats-1
A novel bacterial molecule that links autophagy to bacterial nutrition
Hua Niu & Yasuko Rikihisa
Pages: 787-788
Published online: 06 Feb 2013
AbstractforAts-1 | Full Text | PDF (603.8 KB)
  • 861 Views
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Article Commentary
Angiogenic growth factor axis in autophagy regulation
Marissa J. Stanton, Samikshan Dutta, Navatha Shree Polavaram, Sohini Roy, Michael H. Muders & Kaustubh Datta
Pages: 789-790
Published online: 06 Feb 2013
AbstractforAngiogenic growth factor axis in autophagy regulation | Full Text | PDF (660.2 KB)
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Article Commentary
CFLAR/c-FLIPL
A star in the autophagy, apoptosis and necroptosis alliance
Ming-Xiao He & You-Wen He
Pages: 791-793
Published online: 07 Feb 2013
AbstractforCFLAR/c-FLIPL | Full Text | PDF (736.2 KB)
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Article Commentary
The axis of MAPK1/3-XBP1u-FOXO1 controls autophagic dynamics in cancer cells
Ying Zhao, Xue Li, Ke Ma, Jing Yang, Jingyi Zhou, Wan Fu, Fuzheng Wei, Lina Wang & Wei-Guo Zhu
Pages: 794-796
Published online: 20 Feb 2013
AbstractforThe axis of MAPK1/3-XBP1u-FOXO1 controls autophagic dynamics in cancer cells | Full Text | PDF (856.5 KB)
  • 1155 Views
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Article Commentary
Viroporin-mediated calcium-activated autophagy
Sue E. Crawford & Mary K. Estes
Pages: 797-798
Published online: 26 Feb 2013
AbstractforViroporin-mediated calcium-activated autophagy | Full Text | PDF (896.2 KB)
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Article Commentary
Rapamycin-induced autophagy aggravates pathology and weakness in a mouse model of VCP-associated myopathy
James K. Ching & Conrad C. Weihl
Pages: 799-800
Published online: 25 Feb 2013
AbstractforRapamycin-induced autophagy aggravates pathology and weakness in a mouse model of VCP-associated myopathy | Full Text | PDF (595 KB)
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Article Commentary
TECPR2
A new autophagy link for neurodegeneration
Danit Oz-Levi, Amir Gelman, Zvulun Elazar & Doron Lancet
Pages: 801-802
Published online: 25 Feb 2013
AbstractforTECPR2 | Full Text | PDF (601.7 KB)
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Article Commentary
Dual suppressive effect of MTORC1 on autophagy
Tame the dragon by shackling both the head and the tail
Jing Zhou, Shi-Hao Tan, Patrice Codogno & Han-Ming Shen
Pages: 803-805
Published online: 25 Feb 2013
AbstractforDual suppressive effect of MTORC1 on autophagy | Full Text | PDF (782.7 KB)
  • 781 Views
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Article Commentary
That which does not degrade you makes you stronger
Infectivity of poliovirus depends on vesicle acidification
Alexsia L. Richards & William T. Jackson
Pages: 806-807
Published online: 25 Feb 2013
AbstractforThat which does not degrade you makes you stronger | Full Text | PDF (858.8 KB)
  • 602 Views
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Views and Commentaries

Review Article
Autophagy and senescence
A partnership in search of definition
David A. Gewirtz
Pages: 808-812
Published online: 19 Feb 2013
AbstractforAutophagy and senescence | Full Text | References | PDF (125 KB)
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