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Review

Regulation of transcription by 6S RNAs

Insights from the Escherichia coli and Bacillus subtilis model systems

, , , , , & show all
Pages 508-521 | Received 10 Feb 2014, Accepted 08 Apr 2014, Published online: 23 Apr 2014

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Marietta Thüring, Sweetha Ganapathy, M. Amri C. Schlüter, Marcus Lechner & Roland K. Hartmann. (2021) 6S-2 RNA deletion in the undomesticated B. subtilis strain NCIB 3610 causes a biofilm derepression phenotype. RNA Biology 18:1, pages 79-92.
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Daria Elkina, Lennart Weber, Marcus Lechner, Olga Burenina, Andrea Weisert, Elena Kubareva, Roland K. Hartmann & Gabriele Klug. (2017) 6S RNA in Rhodobacter sphaeroides: 6S RNA and pRNA transcript levels peak in late exponential phase and gene deletion causes a high salt stress phenotype. RNA Biology 14:11, pages 1627-1637.
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Julia Schlereth, Arnold Grünweller, Nadine Biedenkopf, Stephan Becker & Roland K. Hartmann. (2016) RNA binding specificity of Ebola virus transcription factor VP30. RNA Biology 13:9, pages 783-798.
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Stefanie Wehner, Katrin Damm, Roland K Hartmann & Manja Marz. (2014) Dissemination of 6S RNA among Bacteria. RNA Biology 11:11, pages 1467-1478.
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Sweetha Ganapathy, Philipp G. Hoch, Marcus Lechner, Malte Bussiek & Roland K. Hartmann. (2022) Structural and Functional Insight into the Mechanism of Bacillus subtilis 6S-1 RNA Release from RNA Polymerase. Non-Coding RNA 8:1, pages 20.
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N. G. Vasilchenko, E. V. Prazdnova & E. Lewitin. (2022) Epigenetic Mechanisms of Gene Expression Regulation in Bacteria of the Genus Bacillus. Russian Journal of Genetics 58:1, pages 1-19.
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Sweetha Ganapathy, Jana Christin Wiegard & Roland K. Hartmann. (2021) Rapid preparation of 6S RNA-free B. subtilis σA-RNA polymerase and σA. Journal of Microbiological Methods 190, pages 106324.
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Pablo Gabriel Cataldo, Paul Klemm, Marietta Thüring, Lucila Saavedra, Elvira Maria Hebert, Roland K. Hartmann & Marcus Lechner. (2021) Insights into 6S RNA in lactic acid bacteria (LAB). BMC Genomic Data 22:1.
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Karen M. Wassarman. (2018) 6S RNA, a Global Regulator of Transcription. Microbiology Spectrum 6:3.
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James Chen, Karen M. Wassarman, Shili Feng, Katherine Leon, Andrey Feklistov, Jared T. Winkelman, Zongli Li, Thomas Walz, Elizabeth A. Campbell & Seth A. Darst. (2017) 6S RNA Mimics B-Form DNA to Regulate Escherichia coli RNA Polymerase. Molecular Cell 68:2, pages 388-397.e6.
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Yun S. Choi, Lanelle O. Edwards, Aubrey DiBello & Antony M. Jose. (2017) Removing bias against short sequences enables northern blotting to better complement RNA-seq for the study of small RNAs. Nucleic Acids Research 45:10, pages e87-e87.
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Huanjie Sheng, Weston T. Stauffer, Razika Hussein, Chris Lin & Han N. Lim. (2017) Nucleoid and cytoplasmic localization of small RNAs in Escherichia coli . Nucleic Acids Research, pages gkx023.
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Jarmila Hnilicová, Jitka Jirát Matějčková, Michaela Šiková, Jiří Pospíšil, Petr Halada, Josef Pánek & Libor Krásný. (2014) Ms1, a novel sRNA interacting with the RNA polymerase core in mycobacteria. Nucleic Acids Research 42:18, pages 11763-11776.
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Eric W. Miller, Tram N. Cao, Kathryn J. Pflughoeft & Paul Sumby. (2014) RNA-mediated regulation in Gram-positive pathogens: an overview punctuated with examples from the group A S treptococcus . Molecular Microbiology 94:1, pages 9-20.
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Joseph T. Wade & David C. Grainger. (2014) Pervasive transcription: illuminating the dark matter of bacterial transcriptomes. Nature Reviews Microbiology 12:9, pages 647-653.
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Jia Li, Fei Liu, Qi Wang, Pupu Ge, Patrick C. Y. Woo, Jinghua Yan, Yanlin Zhao, George F. Gao, Cui Hua Liu & Changting Liu. (2014) Genomic and transcriptomic analysis of NDM-1 Klebsiella pneumoniae in spaceflight reveal mechanisms underlying environmental adaptability. Scientific Reports 4:1.
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